| Gene ID | Transcript ID | Common Gene Name | # of miRNA targets for specified miRNAs | Chromosome | Strand Direction | Transcript Link to view miRNA target predictions | Gene Link | Description |
|---|---|---|---|---|---|---|---|---|
| B0395.1 | B0395.1 | nhx-1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | nhx-1 encodes a sodium/proton exchanger expressed intracellularly within hypodermal and muscle cells. NHX-1 is required for embryonic viability, and is thought to prevent intracellular acidification by catalysing the electroneutral exchange of vesicular sodium for an intracellular proton. [Source: WormBase] |
| B0403.6 | B0403.6 | B0403.6 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C01C10.3 | C01C10.3.1 | acl-12 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C01C10.3 | C01C10.3.2 | acl-12 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C01C4.1 | C01C4.1 | nlp-1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | nlp-1 encodes a predicted neuropeptide-like protein of the MSFamide family with similarity to Aplysia californica (sea hare) buccalin, a neuropeptide that regulates acetylcholine-induced muscle contraction. NLP-1 is expressed in the phasmid PHB tail sensory neuron, lateral neurons, head neurons, and the intestine. the precise role of NLP-1 in nervous system function and development is not yet known. [Source: WormBase] |
| C02H7.3 | C02H7.3a | aex-3 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | aex-3 encodes a guanine nucleotide exchange factor for the rab-3 GTPase that is orthologous to human MAP kinase activating protein containing death domain (MADD, OMIM:603584). AEX-3 is required for intracellular vesicle trafficking as well as synaptic vesicle release and interacts with CAB-1 and RAB-3 to regulate separate pathways for neural activities such as defecation and male mating, respectively. AEX-3 is also required for egg laying and locomotion. AEX-3 is expressed in nearly all neurons. [Source: WormBase] |
| C03F11.1 | C03F11.1 | C03F11.1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C03H12.1 | C03H12.1 | C03H12.1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C05C9.3 | C05C9.3 | C05C9.3 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). [Source: WormBase] |
| C05D9.7 | C05D9.7 | C05D9.7 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C05D9.9 | C05D9.9b | C05D9.9 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C05E11.4 | C05E11.4 | amt-1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | amt-1 encodes a transmembrane transporter that by homology, is predicted to transport ammonium ions across the plasma membrane. as loss of amt-1 activity via large-scale RNAi screens does not result in any obvious abnormalities, the precise role of AMT-1 in C. elegans development and/or behavior is not yet known. [Source: WormBase] |
| C05G5.1 | C05G5.1 | C05G5.1 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C05G5.2 | C05G5.2 | C05G5.2 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C07A12.7 | C07A12.7a.1 | C07A12.7 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C07A12.7 | C07A12.7a.2 | C07A12.7 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C07A12.7 | C07A12.7b | C07A12.7 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C07A12.7 | C07A12.7c.1 | C07A12.7 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C07A12.7 | C07A12.7c.2 | C07A12.7 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C07B5.2 | C07B5.2 | C07B5.2 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C09B8.3 | C09B8.3 | C09B8.3 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C09E10.2 | C09E10.2a | dgk-1 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | dgk-1 encodes an ortholog of mammalian diacylglycerol kinase theta (DGKQ). dgk-1 activity functions downstream in a serotonin signaling pathway that regulates locomotion and synaptic transmission. in addition, dgk-1 activity negatively regulates egg laying. dgk-1 genetically interacts with the goa-1 and egl-30 signaling pathways. a GFP::DGK-1 reporter fusion protein is expressed in the excretory canals and in most neurons, including the ventral cord neurons. in neurons, GFP::DGK-1 localizes to axons and cell bodies. when expressed ectopically in HEK293 cells, DGK-1 exhibits DAG kinase activity. [Source: WormBase] |
| C09E10.2 | C09E10.2b | dgk-1 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | dgk-1 encodes an ortholog of mammalian diacylglycerol kinase theta (DGKQ). dgk-1 activity functions downstream in a serotonin signaling pathway that regulates locomotion and synaptic transmission. in addition, dgk-1 activity negatively regulates egg laying. dgk-1 genetically interacts with the goa-1 and egl-30 signaling pathways. a GFP::DGK-1 reporter fusion protein is expressed in the excretory canals and in most neurons, including the ventral cord neurons. in neurons, GFP::DGK-1 localizes to axons and cell bodies. when expressed ectopically in HEK293 cells, DGK-1 exhibits DAG kinase activity. [Source: WormBase] |
| C09E10.2 | C09E10.2c | dgk-1 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | dgk-1 encodes an ortholog of mammalian diacylglycerol kinase theta (DGKQ). dgk-1 activity functions downstream in a serotonin signaling pathway that regulates locomotion and synaptic transmission. in addition, dgk-1 activity negatively regulates egg laying. dgk-1 genetically interacts with the goa-1 and egl-30 signaling pathways. a GFP::DGK-1 reporter fusion protein is expressed in the excretory canals and in most neurons, including the ventral cord neurons. in neurons, GFP::DGK-1 localizes to axons and cell bodies. when expressed ectopically in HEK293 cells, DGK-1 exhibits DAG kinase activity. [Source: WormBase] |
| C09E10.2 | C09E10.2d | dgk-1 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | dgk-1 encodes an ortholog of mammalian diacylglycerol kinase theta (DGKQ). dgk-1 activity functions downstream in a serotonin signaling pathway that regulates locomotion and synaptic transmission. in addition, dgk-1 activity negatively regulates egg laying. dgk-1 genetically interacts with the goa-1 and egl-30 signaling pathways. a GFP::DGK-1 reporter fusion protein is expressed in the excretory canals and in most neurons, including the ventral cord neurons. in neurons, GFP::DGK-1 localizes to axons and cell bodies. when expressed ectopically in HEK293 cells, DGK-1 exhibits DAG kinase activity. [Source: WormBase] |
| C09E10.2 | C09E10.2e | dgk-1 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | dgk-1 encodes an ortholog of mammalian diacylglycerol kinase theta (DGKQ). dgk-1 activity functions downstream in a serotonin signaling pathway that regulates locomotion and synaptic transmission. in addition, dgk-1 activity negatively regulates egg laying. dgk-1 genetically interacts with the goa-1 and egl-30 signaling pathways. a GFP::DGK-1 reporter fusion protein is expressed in the excretory canals and in most neurons, including the ventral cord neurons. in neurons, GFP::DGK-1 localizes to axons and cell bodies. when expressed ectopically in HEK293 cells, DGK-1 exhibits DAG kinase activity. [Source: WormBase] |
| C11G6.4 | C11G6.4a | nhr-28 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C14A11.6 | C14A11.6 | C14A11.6 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C14H10.1 | C14H10.1.1 | C14H10.1 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C14H10.1 | C14H10.1.2 | C14H10.1 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C15C7.7 | C15C7.7 | C15C7.7 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C15H9.1 | C15H9.1 | nnt-1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | nnt-1 encodes a proton-pumping nicotinamide nucleotide transhydrogenase predicted to be mitochondrial. [Source: WormBase] |
| C15H9.3 | C15H9.3 | C15H9.3 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C16B8.1 | C16B8.1.1 | lin-18 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | lin-18 encodes a predicted receptor tyrosine kinase that is a member of the Ryk/Derailed family of tyrosine kinase-related receptors (OMIM:600524, mutations in humans are associated with cleft palate). in C. elegans, LIN-18 is required for establishing the polarity of the secondary vulval cell lineage produced by the P7.p vulval precursor cell. LIN-18 may be a receptor for Wnt-like signaling molecules, and in vulval development appears to function independently of, but in parallel with, LIN-17, a Frizzled-like Wnt receptor, also required for proper orientation of the P7.p lineage. a lin-18 reporter gene is expressed in body wall muscle, neurons, and the developing vulva. in the vulva, expression is detected in P5.p, P6.p, and P7.p and all of their descendants during the L3 and L4 larval stages. [Source: WormBase] |
| C16B8.1 | C16B8.1.2 | lin-18 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | lin-18 encodes a predicted receptor tyrosine kinase that is a member of the Ryk/Derailed family of tyrosine kinase-related receptors (OMIM:600524, mutations in humans are associated with cleft palate). in C. elegans, LIN-18 is required for establishing the polarity of the secondary vulval cell lineage produced by the P7.p vulval precursor cell. LIN-18 may be a receptor for Wnt-like signaling molecules, and in vulval development appears to function independently of, but in parallel with, LIN-17, a Frizzled-like Wnt receptor, also required for proper orientation of the P7.p lineage. a lin-18 reporter gene is expressed in body wall muscle, neurons, and the developing vulva. in the vulva, expression is detected in P5.p, P6.p, and P7.p and all of their descendants during the L3 and L4 larval stages. [Source: WormBase] |
| C16B8.2 | C16B8.2.1 | C16B8.2 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C16B8.2 | C16B8.2.2 | C16B8.2 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C17H11.6 | C17H11.6a | C17H11.6 | 2 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C17H11.6 | C17H11.6b | C17H11.6 | 2 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C17H11.6 | C17H11.6c.1 | C17H11.6 | 2 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C17H11.6 | C17H11.6c.2 | C17H11.6 | 2 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C17H11.6 | C17H11.6c.3 | C17H11.6 | 2 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C17H11.6 | C17H11.6d | C17H11.6 | 2 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C18A11.7 | C18A11.7a | dim-1 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | dim-1 encodes novel proteins containing three immunoglobulin-like repeats in the carboxy terminus. dim-1 was originally identified in screens for mutations that suppress locomotion defects caused by aberrant muscle assembly in animals carrying a missense mutation in unc-112, which encodes a pleckstrin homology domain-containing protein required for the early stages of muscle assembly. loss-of-function mutations in dim-1 indicate that DIM-1 is required for fully normal muscle organization and proper anchoring of the myofilament lattice to the muscle cell membrane. a DIM-1(S)::GFP fusion protein made with the shorter of the DIM-1 isoforms localizes to an area adjacent to the muscle cell membrane, around and between the dense bodies. the DIM-1(S) isoform is sufficient for rescue of muscle structure and stability in dim-1 mutant hermaphrodites. [Source: WormBase] |
| C18B2.1 | C18B2.1 | C18B2.1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C18B2.6 | C18B2.6 | C18B2.6 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C23H4.6 | C23H4.6a | C23H4.6 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C23H4.6 | C23H4.6b | C23H4.6 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C25A11.4 | C25A11.4a | ajm-1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | ajm-1 encodes a member of the apical junction molecule class that is required for correct elongation of the C. elegans embryo. AJM-1 contains a coiled-coil motif. AJM-1 binds DLG-1 in vitro, in yeast two-hybrid assays, and in vivo. AJM-1 is mislocalized in a dlg-1(RNAi) background. LET-413 is required for rapid confinement of DLG-1 and AJM-1 to a narrow apical region in C. elegans epithelia. CLC-1 colocalizes with AJM-1. vab-9 mutations enhance the adhesion defects of ajm-1 mutants. ajm-1 is expressed at the apical borders of all epithelia. [Source: WormBase] |
| C25A11.4 | C25A11.4d | ajm-1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | ajm-1 encodes a member of the apical junction molecule class that is required for correct elongation of the C. elegans embryo. AJM-1 contains a coiled-coil motif. AJM-1 binds DLG-1 in vitro, in yeast two-hybrid assays, and in vivo. AJM-1 is mislocalized in a dlg-1(RNAi) background. LET-413 is required for rapid confinement of DLG-1 and AJM-1 to a narrow apical region in C. elegans epithelia. CLC-1 colocalizes with AJM-1. vab-9 mutations enhance the adhesion defects of ajm-1 mutants. ajm-1 is expressed at the apical borders of all epithelia. [Source: WormBase] |
| C25B8.3 | C25B8.3a | cpr-6 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C25B8.3 | C25B8.3b | cpr-6 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C25B8.3 | C25B8.3c | cpr-6 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C25B8.4 | C25B8.4a | clec-266 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C25B8.4 | C25B8.4b | clec-266 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C25B8.4 | C25B8.4c | clec-266 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C25G6.1 | C25G6.1 | C25G6.1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C25G6.3 | C25G6.3 | C25G6.3 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C25G6.5 | C25G6.5 | npr-11 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C26B9.2 | C26B9.2 | C26B9.2 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C26B9.5 | C26B9.5 | C26B9.5 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C26B9.7 | C26B9.7 | C26B9.7 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C29F7.1 | C29F7.1 | C29F7.1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C30E1.6 | C30E1.6 | C30E1.6 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C30G4.3 | C30G4.3 | gcy-11 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C31E10.8 | C31E10.8 | tbc-19 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C31H2.2 | C31H2.2 | dpy-8 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | dpy-8 encodes a collagen with a nematode-specific N-terminal domain that is required for normal body morphology and (perhaps) for a normal embryonic cell division rate. dpy-8 interacts genetically with emb-5 and glp-1. [Source: WormBase] |
| C33D12.2 | C33D12.2 | C33D12.2 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | C33D12.2 encodes a predicted transmembrane protein orthologous to human ACDP1-ACDP4 and S. cerevisiae MAM3, and paralogous to C01H6.6, C52D10.12, M02F4.3, R04E5.2, and R13G10.4. by orthology with MAM3, C33D12.2 may participate in metal homoeostasis. C33D12.2 is expressed in intestine, body wall muscle, nervous system (including ventral and dorsal nerve cords and head neurons), and adult vulval muscle and reproductive system. C33D12.2, MAM3, and ACDP1-ACDP4 belong to a family of proteins (sharing an ACD domain) from bacteria, yeast, plants, and metazoa. murine Acdp1 is a plasma membrane protein. bacterial proteins containing the ACD domain include CorC from Salmonella typhimurium, which is involved in magnesium and cobalt efflux. C33D12.2 has no obvious function in RNAi assays. [Source: WormBase] |
| C33D12.7 | C33D12.7 | ceh-30 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | ceh-30 encodes a homeodomain protein most similar to Drosophila and mammalian BarH1 (OMIM:605211) which function in neuronal cell fate determination. the precise biological role of CEH-30 in C. elegans development and/or behavior is not yet known. [Source: WormBase] |
| C33E10.6 | C33E10.6 | C33E10.6 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C33G3.1 | C33G3.1b.1 | dyc-1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | dyc-1 encodes a homolog of murine CAPON, a protein associated with neuronal nitric oxide synthase that regulates its interactions with PSD95. DYC-1 is expressed in muscle, and is required for a dystrophin-related function in muscle. [Source: WormBase] |
| C33G3.1 | C33G3.1b.2 | dyc-1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | dyc-1 encodes a homolog of murine CAPON, a protein associated with neuronal nitric oxide synthase that regulates its interactions with PSD95. DYC-1 is expressed in muscle, and is required for a dystrophin-related function in muscle. [Source: WormBase] |
| C34E7.1 | C34E7.1.1 | pqn-18 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). [Source: WormBase] |
| C34E7.1 | C34E7.1.2 | pqn-18 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). [Source: WormBase] |
| C34F6.7 | C34F6.7 | C34F6.7 | 2 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C35B8.2 | C35B8.2b | vav-1 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | vav-1 encodes a Rho/Rac-family guanine nucleotide exchange factor orthologous to the Vav proto-oncogene. VAV-1 is a complex protein with several domains, from N- to C-terminus: a calponin-like actin-binding domain. a RhoGEF/DH domain. a pleckstrin-like domain. a SH2 motif domain. and an SH3 domain. in C. elegans vav-1 is an essential gene and functions to regulate the concentration of intracellular calcium and thus, plays a key role in regulating rhythmic behaviors such as pharyngeal pumping, ovulation, and defecation. in addition, vav-1 has been shown to be a target of the mir-61 miRNA in the secondary vulval precursor cells, where it functions to negatively regulate LIN-12 activity. VAV-1::GFP reporters are expressed in the pharynx, the contractile sheath cells of the gonad, the four posterior-most intestinal cells, and the three rectal epithelial cells. VAV-1::GFP is also seen in the distal gonad, body wall muscle, and in the vulval precursor cells and their descendants. [Source: WormBase] |
| C35C5.6 | C35C5.6 | C35C5.6 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C39E6.1 | C39E6.1.1 | lon-2 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | lon-2 encodes a member of the glypican family of heparan sulfate proteoglycans. during development, lon-2 activity is required in the hypodermis for negative regulation of the DBL-1/BMP signaling pathway that regulates body length. genetic analyses indicate that lon-2 functions upstream of dbl-1, and in vitro studies show that LON-2 can bind mammalian BMP2, suggesting that LON-2 may directly interact with DBL-1 to negatively regulate DBL-1/BMP signaling. in addition to expression in hypodermis, LON-2 is expressed strongly in the intestine, particularly the anterior and posterior cells. LON-2 localizes to the cell surface. [Source: WormBase] |
| C39E6.1 | C39E6.1.2 | lon-2 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | lon-2 encodes a member of the glypican family of heparan sulfate proteoglycans. during development, lon-2 activity is required in the hypodermis for negative regulation of the DBL-1/BMP signaling pathway that regulates body length. genetic analyses indicate that lon-2 functions upstream of dbl-1, and in vitro studies show that LON-2 can bind mammalian BMP2, suggesting that LON-2 may directly interact with DBL-1 to negatively regulate DBL-1/BMP signaling. in addition to expression in hypodermis, LON-2 is expressed strongly in the intestine, particularly the anterior and posterior cells. LON-2 localizes to the cell surface. [Source: WormBase] |
| C39E6.1 | C39E6.1.3 | lon-2 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | lon-2 encodes a member of the glypican family of heparan sulfate proteoglycans. during development, lon-2 activity is required in the hypodermis for negative regulation of the DBL-1/BMP signaling pathway that regulates body length. genetic analyses indicate that lon-2 functions upstream of dbl-1, and in vitro studies show that LON-2 can bind mammalian BMP2, suggesting that LON-2 may directly interact with DBL-1 to negatively regulate DBL-1/BMP signaling. in addition to expression in hypodermis, LON-2 is expressed strongly in the intestine, particularly the anterior and posterior cells. LON-2 localizes to the cell surface. [Source: WormBase] |
| C40H5.4 | C40H5.4 | lact-7 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | lact-7 encodes a beta-lactamase domain-containing protein. [Source: WormBase] |
| C41A3.1 | C41A3.1 | C41A3.1 | 3 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C41A3.2 | C41A3.2a | C41A3.2 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C41A3.2 | C41A3.2b | C41A3.2 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C44C1.5 | C44C1.5a | C44C1.5 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C44E12.3 | C44E12.3e | twk-17 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C44H4.5 | C44H4.5 | tap-1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | tap-1 encodes the C. elegans ortholog of the vertebrate TAB1 (TGF-beta activated kinase 1/MAP3K7 binding protein 1) protein. tap-1 is required, together with mom-4, for endodermal cell fate specification in the developing embryo. when co-expressed in vitro, TAP-1 binds MOM-4, the C. elegans TAK1 ortholog, and positively regulates MOM-4 MAPKKK activity. [Source: WormBase] |
| C45B2.5 | C45B2.5 | gln-1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C46F4.2 | C46F4.2.1 | acs-17 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C46F4.2 | C46F4.2.2 | acs-17 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C46F4.3 | C46F4.3 | C46F4.3 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C47C12.6 | C47C12.6.1 | deg-1 | 2 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | deg-1 encodes a putative ion channel for which altered function induces necrotic cell death of neurons required for mechanosensory behavior. expressed in the ASH, IL1, AVD, AVG, and PVC neurons in addition to some muscle cells. [Source: WormBase] |
| C47C12.6 | C47C12.6.2 | deg-1 | 2 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | deg-1 encodes a putative ion channel for which altered function induces necrotic cell death of neurons required for mechanosensory behavior. expressed in the ASH, IL1, AVD, AVG, and PVC neurons in addition to some muscle cells. [Source: WormBase] |
| C47C12.6 | C47C12.6.3 | deg-1 | 2 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | deg-1 encodes a putative ion channel for which altered function induces necrotic cell death of neurons required for mechanosensory behavior. expressed in the ASH, IL1, AVD, AVG, and PVC neurons in addition to some muscle cells. [Source: WormBase] |
| C49F5.6 | C49F5.6 | C49F5.6 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C52B11.2 | C52B11.2 | tag-303 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C52B11.3 | C52B11.3 | dop-4 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C52B9.6 | C52B9.6 | twk-28 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C52B9.7 | C52B9.7a | paf-2 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | paf-2 encodes one of two C. elegans homologs of mammalian Type II platelet-activating factor-acetylhydrolase (PAF-AH). paf-2 activity is essential for embryonic morphogenesis, specifically for the proper organization, alignment, and adhesion of hypodermal cells during embryonic enclosure. a paf-2::GFP reporter fusion is expressed in hypodermal cells and in the intestine, beginning of embryonic elongation. [Source: WormBase] |
| C53C11.3 | C53C11.3 | ptr-5 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | ptr-5 encodes a nematode-specific member of the sterol sensing domain (SSD) proteins, distantly paralogous to Drosophila PATCHED (PTC) and human PTCH (OMIM:601309, mutated in basal cell nevus syndrome). PTR-5 is weakly required for normal molting from L4 to adult stages. PTR-5 is also required for normal growth to full size and locomotion. PTR-5 is expressed in head and tail neurons, and in ventral nerve cord. [Source: WormBase] |