| Gene ID | Transcript ID | Common Gene Name | # of miRNA targets for specified miRNAs | Chromosome | Strand Direction | Transcript Link to view miRNA target predictions | Gene Link | Description |
|---|---|---|---|---|---|---|---|---|
| AH9.4 | AH9.4 | AH9.4 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| B0198.2 | B0198.2a | B0198.2 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| B0198.2 | B0198.2b | B0198.2 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| B0395.2 | B0395.2 | mboa-1 | 2 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | mboa-1 encodes a putative acyl-Coenzyme A:cholesterol ('sterol') O-acyltransferase, orthologous to human SOAT1 (OMIM:102642). MBOA-1 is required for normal locomotion and normally long lifespan in mass RNAi assays. mboa-1 is expressed in the seam cells and nervous systems of larvae and adults, and in the adult reproductive system. [Source: WormBase] |
| C02B8.1 | C02B8.1.1 | C02B8.1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C02B8.1 | C02B8.1.2 | C02B8.1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C02B8.4 | C02B8.4 | hlh-8 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | The hlh-8 gene encodes a helix-loop-helix protein required for normal muscle development, and hence for normal defecation and egg-laying. [Source: WormBase] |
| C02F12.4 | C02F12.4 | tag-52 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C03A3.3 | C03A3.3 | C03A3.3 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C03F11.3 | C03F11.3 | scav-1 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C03F11.4 | C03F11.4.1 | C03F11.4 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C03F11.4 | C03F11.4.2 | C03F11.4 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C03F11.4 | C03F11.4.3 | C03F11.4 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C03G5.10 | C03G5.10 | nspc-3 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C03G5.8 | C03G5.8 | nspc-1 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C04A11.4 | C04A11.4 | adm-2 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | adm-2 encodes a protein containing a snake venom disintegrin-domain and a metalloprotease-like domain (i.e., a protein of the ADAM family). like ADM-1, ADM-2 is homologous to a mammalian sperm glycoprotein (PH-30/fertilin) implicated in sperm-egg fusion, and ADM-2 might thus be a fusogenic protein mediating the merging of plasma membranes during development. [Source: WormBase] |
| C04B4.1 | C04B4.1.1 | C04B4.1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C04B4.1 | C04B4.1.2 | C04B4.1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C05A9.1 | C05A9.1a | pgp-5 | 2 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | pgp-5 encodes a transmembrane protein that is a member of the P-glycoprotein subclass of the ATP-binding cassette (ABC) transporter superfamily. by homology, PGP-5 is predicted to function as an ATP-dependent efflux pump that protects C. elegans by exporting exogenous toxins. however, as loss of pgp-5 activity via large-scale RNAi screens does not result in any obvious abnormalities, the precise role of PGP-5 in C. elegans development and/or behavior is not yet known. [Source: WormBase] |
| C05A9.1 | C05A9.1b | pgp-5 | 2 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | pgp-5 encodes a transmembrane protein that is a member of the P-glycoprotein subclass of the ATP-binding cassette (ABC) transporter superfamily. by homology, PGP-5 is predicted to function as an ATP-dependent efflux pump that protects C. elegans by exporting exogenous toxins. however, as loss of pgp-5 activity via large-scale RNAi screens does not result in any obvious abnormalities, the precise role of PGP-5 in C. elegans development and/or behavior is not yet known. [Source: WormBase] |
| C08A9.9 | C08A9.9.1 | C08A9.9 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C08A9.9 | C08A9.9.2 | C08A9.9 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C09E10.2 | C09E10.2a | dgk-1 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | dgk-1 encodes an ortholog of mammalian diacylglycerol kinase theta (DGKQ). dgk-1 activity functions downstream in a serotonin signaling pathway that regulates locomotion and synaptic transmission. in addition, dgk-1 activity negatively regulates egg laying. dgk-1 genetically interacts with the goa-1 and egl-30 signaling pathways. a GFP::DGK-1 reporter fusion protein is expressed in the excretory canals and in most neurons, including the ventral cord neurons. in neurons, GFP::DGK-1 localizes to axons and cell bodies. when expressed ectopically in HEK293 cells, DGK-1 exhibits DAG kinase activity. [Source: WormBase] |
| C09E10.2 | C09E10.2b | dgk-1 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | dgk-1 encodes an ortholog of mammalian diacylglycerol kinase theta (DGKQ). dgk-1 activity functions downstream in a serotonin signaling pathway that regulates locomotion and synaptic transmission. in addition, dgk-1 activity negatively regulates egg laying. dgk-1 genetically interacts with the goa-1 and egl-30 signaling pathways. a GFP::DGK-1 reporter fusion protein is expressed in the excretory canals and in most neurons, including the ventral cord neurons. in neurons, GFP::DGK-1 localizes to axons and cell bodies. when expressed ectopically in HEK293 cells, DGK-1 exhibits DAG kinase activity. [Source: WormBase] |
| C09E10.2 | C09E10.2c | dgk-1 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | dgk-1 encodes an ortholog of mammalian diacylglycerol kinase theta (DGKQ). dgk-1 activity functions downstream in a serotonin signaling pathway that regulates locomotion and synaptic transmission. in addition, dgk-1 activity negatively regulates egg laying. dgk-1 genetically interacts with the goa-1 and egl-30 signaling pathways. a GFP::DGK-1 reporter fusion protein is expressed in the excretory canals and in most neurons, including the ventral cord neurons. in neurons, GFP::DGK-1 localizes to axons and cell bodies. when expressed ectopically in HEK293 cells, DGK-1 exhibits DAG kinase activity. [Source: WormBase] |
| C09E10.2 | C09E10.2d | dgk-1 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | dgk-1 encodes an ortholog of mammalian diacylglycerol kinase theta (DGKQ). dgk-1 activity functions downstream in a serotonin signaling pathway that regulates locomotion and synaptic transmission. in addition, dgk-1 activity negatively regulates egg laying. dgk-1 genetically interacts with the goa-1 and egl-30 signaling pathways. a GFP::DGK-1 reporter fusion protein is expressed in the excretory canals and in most neurons, including the ventral cord neurons. in neurons, GFP::DGK-1 localizes to axons and cell bodies. when expressed ectopically in HEK293 cells, DGK-1 exhibits DAG kinase activity. [Source: WormBase] |
| C09E10.2 | C09E10.2e | dgk-1 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | dgk-1 encodes an ortholog of mammalian diacylglycerol kinase theta (DGKQ). dgk-1 activity functions downstream in a serotonin signaling pathway that regulates locomotion and synaptic transmission. in addition, dgk-1 activity negatively regulates egg laying. dgk-1 genetically interacts with the goa-1 and egl-30 signaling pathways. a GFP::DGK-1 reporter fusion protein is expressed in the excretory canals and in most neurons, including the ventral cord neurons. in neurons, GFP::DGK-1 localizes to axons and cell bodies. when expressed ectopically in HEK293 cells, DGK-1 exhibits DAG kinase activity. [Source: WormBase] |
| C11E4.3 | C11E4.3 | tag-263 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C11H1.3 | C11H1.3 | C11H1.3 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C14A11.3 | C14A11.3a | cgef-1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C14A11.3 | C14A11.3b | cgef-1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C14A11.3 | C14A11.3c | cgef-1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C14E2.4 | C14E2.4 | C14E2.4 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C15B12.2 | C15B12.2.1 | C15B12.2 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C15B12.5 | C15B12.5b | gar-1 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | gar-1 encodes a G-protein-linked acetylcholine receptor. though gar-1 is most closely related to muscarinic acetylcholine receptors (mAChR), it is pharmacologically distinct from them in its response to certain ligands. gar-1 gene transcripts are expressed at all developmental stages. the GAR-1-GFP fusion protein is expressed in some head neurons and in the PVM neuron. electrophysiological studies indicate that gar-1 couples to the inhibitory subunit of G proteins and not to Gs or to Go/Gq. [Source: WormBase] |
| C15B12.7 | C15B12.7b | cdf-1 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | a cation diffusion facilitator protein, affects vulva development, genetically interacts with let-60/ras signaling pathway. and is expressed in the vulval muscles, the intestinal cells, and in the vulval precursor cells. [Source: WormBase] |
| C15H9.1 | C15H9.1 | nnt-1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | nnt-1 encodes a proton-pumping nicotinamide nucleotide transhydrogenase predicted to be mitochondrial. [Source: WormBase] |
| C15H9.4 | C15H9.4 | C15H9.4 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C15H9.8 | C15H9.8a | prx-3 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | prx-3 is orthologous to the human gene PEROXISOMAL BIOGENESIS FACTOR 3 (PEX3. OMIM:603164), which when mutated leads to Zellweger syndrome of complementation group G. [Source: WormBase] |
| C17G1.3 | C17G1.3a | ugt-23 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C17G1.3 | C17G1.3b.1 | ugt-23 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C18A11.1 | C18A11.1 | C18A11.1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C18B12.3 | C18B12.3 | dsc-1 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C23F12.4 | C23F12.4 | C23F12.4 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C23H4.2 | C23H4.2 | C23H4.2 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C24A8.1 | C24A8.1 | dop-6 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | dop-6 encodes an homolog of mammalian D2 or D3 dopamine receptors, and a paralog of DOP-2/-3. dop-6 is expressed in the nervous system. because of its paralogy, DOP-6 might act redundantly with DOP-2 to promote the basal slowing response to bacterial feeding, or it might account for the residual response to excess dopamine seen in triple dop-1/-2/-3 mutants. but dop-6 otherwise has no obvious function in RNAi assays of brood size, egg laying, pharyngeal pumping, locomotion, or male mating. [Source: WormBase] |
| C25A11.2 | C25A11.2.1 | C25A11.2 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C25A11.4 | C25A11.4a | ajm-1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | ajm-1 encodes a member of the apical junction molecule class that is required for correct elongation of the C. elegans embryo. AJM-1 contains a coiled-coil motif. AJM-1 binds DLG-1 in vitro, in yeast two-hybrid assays, and in vivo. AJM-1 is mislocalized in a dlg-1(RNAi) background. LET-413 is required for rapid confinement of DLG-1 and AJM-1 to a narrow apical region in C. elegans epithelia. CLC-1 colocalizes with AJM-1. vab-9 mutations enhance the adhesion defects of ajm-1 mutants. ajm-1 is expressed at the apical borders of all epithelia. [Source: WormBase] |
| C25A11.4 | C25A11.4b | ajm-1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | ajm-1 encodes a member of the apical junction molecule class that is required for correct elongation of the C. elegans embryo. AJM-1 contains a coiled-coil motif. AJM-1 binds DLG-1 in vitro, in yeast two-hybrid assays, and in vivo. AJM-1 is mislocalized in a dlg-1(RNAi) background. LET-413 is required for rapid confinement of DLG-1 and AJM-1 to a narrow apical region in C. elegans epithelia. CLC-1 colocalizes with AJM-1. vab-9 mutations enhance the adhesion defects of ajm-1 mutants. ajm-1 is expressed at the apical borders of all epithelia. [Source: WormBase] |
| C25A11.4 | C25A11.4c | ajm-1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | ajm-1 encodes a member of the apical junction molecule class that is required for correct elongation of the C. elegans embryo. AJM-1 contains a coiled-coil motif. AJM-1 binds DLG-1 in vitro, in yeast two-hybrid assays, and in vivo. AJM-1 is mislocalized in a dlg-1(RNAi) background. LET-413 is required for rapid confinement of DLG-1 and AJM-1 to a narrow apical region in C. elegans epithelia. CLC-1 colocalizes with AJM-1. vab-9 mutations enhance the adhesion defects of ajm-1 mutants. ajm-1 is expressed at the apical borders of all epithelia. [Source: WormBase] |
| C25A11.4 | C25A11.4d | ajm-1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | ajm-1 encodes a member of the apical junction molecule class that is required for correct elongation of the C. elegans embryo. AJM-1 contains a coiled-coil motif. AJM-1 binds DLG-1 in vitro, in yeast two-hybrid assays, and in vivo. AJM-1 is mislocalized in a dlg-1(RNAi) background. LET-413 is required for rapid confinement of DLG-1 and AJM-1 to a narrow apical region in C. elegans epithelia. CLC-1 colocalizes with AJM-1. vab-9 mutations enhance the adhesion defects of ajm-1 mutants. ajm-1 is expressed at the apical borders of all epithelia. [Source: WormBase] |
| C26B9.5 | C26B9.5 | C26B9.5 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C26B9.6 | C26B9.6 | C26B9.6 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C26G2.1 | C26G2.1 | syg-2 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | syg-2 encodes a transmembrane protein that is a member of the immunoglobulin superfamily of proteins. during larval development, SYG-2 activity is required in vulval epithelial cells for proper synaptic specificity of the HSNL neuron. in regulating synapse formation, SYG-2 acts as a guidepost protein for the SYG-1 receptor that interacts with SYG-2 and acts within HSNL to regulate synaptic specificity. a SYG-2::GFP fusion protein is expressed in the primary vulval cell lineages beginning at the L3 larval stage, with expression increasing during the L4 stage and finally disappearing by adulthood. in embryos, SYG-2::GFP expression is detected in some head neurons and body wall muscles, the latter of which also express the reporter during the L1 and L2 larval stages. [Source: WormBase] |
| C30F2.3 | C30F2.3 | C30F2.3 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C30G4.3 | C30G4.3 | gcy-11 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C31E10.8 | C31E10.8 | tbc-19 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C33A11.1 | C33A11.1.1 | C33A11.1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C33A11.1 | C33A11.1.2 | C33A11.1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C33A11.1 | C33A11.1.3 | C33A11.1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C33G3.5 | C33G3.5 | C33G3.5 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C36B7.5 | C36B7.5a | C36B7.5 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C36B7.5 | C36B7.5b | C36B7.5 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C37E2.3 | C37E2.3 | C37E2.3 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C39B10.1 | C39B10.1 | C39B10.1 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C39E6.1 | C39E6.1.1 | lon-2 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | lon-2 encodes a member of the glypican family of heparan sulfate proteoglycans. during development, lon-2 activity is required in the hypodermis for negative regulation of the DBL-1/BMP signaling pathway that regulates body length. genetic analyses indicate that lon-2 functions upstream of dbl-1, and in vitro studies show that LON-2 can bind mammalian BMP2, suggesting that LON-2 may directly interact with DBL-1 to negatively regulate DBL-1/BMP signaling. in addition to expression in hypodermis, LON-2 is expressed strongly in the intestine, particularly the anterior and posterior cells. LON-2 localizes to the cell surface. [Source: WormBase] |
| C39E6.1 | C39E6.1.2 | lon-2 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | lon-2 encodes a member of the glypican family of heparan sulfate proteoglycans. during development, lon-2 activity is required in the hypodermis for negative regulation of the DBL-1/BMP signaling pathway that regulates body length. genetic analyses indicate that lon-2 functions upstream of dbl-1, and in vitro studies show that LON-2 can bind mammalian BMP2, suggesting that LON-2 may directly interact with DBL-1 to negatively regulate DBL-1/BMP signaling. in addition to expression in hypodermis, LON-2 is expressed strongly in the intestine, particularly the anterior and posterior cells. LON-2 localizes to the cell surface. [Source: WormBase] |
| C39E6.1 | C39E6.1.3 | lon-2 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | lon-2 encodes a member of the glypican family of heparan sulfate proteoglycans. during development, lon-2 activity is required in the hypodermis for negative regulation of the DBL-1/BMP signaling pathway that regulates body length. genetic analyses indicate that lon-2 functions upstream of dbl-1, and in vitro studies show that LON-2 can bind mammalian BMP2, suggesting that LON-2 may directly interact with DBL-1 to negatively regulate DBL-1/BMP signaling. in addition to expression in hypodermis, LON-2 is expressed strongly in the intestine, particularly the anterior and posterior cells. LON-2 localizes to the cell surface. [Source: WormBase] |
| C42D8.9 | C42D8.9 | C42D8.9 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C43H6.9 | C43H6.9 | glr-7 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | glr-7 encodes a protein containing a ligand-gated ion channel domain and is a predicted non-NMDA type ionotropic glutamate receptor. expressed in the pharyngeal nervous system. [Source: WormBase] |
| C44C1.2 | C44C1.2 | C44C1.2 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C44C10.1 | C44C10.1 | col-180 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C52B11.3 | C52B11.3 | dop-4 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C52B9.9 | C52B9.9 | mec-18 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | mec-18 encodes a protein similar to firefly luciferase and plant protein 4-coumarate coA ligase. mec-18 is involved in sensory mechanotransduction. genetic interactions with other mec genes suggest that mec-18 may be involved in negative regulation of the degenerin channel in the touch receptor neurons. mec-18 is expressed exclusively in the touch cells. [Source: WormBase] |
| C53B7.2 | C53B7.2 | C53B7.2 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | C53B7.2 encodes a putative secreted TIL-domain protease inhibitor paralogous to SWM-1, ISL-1, and the products of 11 other C. elegans genes. C53B7.2 and its relatives are collectively similar to other TIL-domain protease inhibitors from nematodes, insects, and vertebrates. C53B7.2 has no obvious function in mass RNAi assays. [Source: WormBase] |
| C54D1.5 | C54D1.5.1 | lam-2 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | lam-2 encodes a laminin gamma subunit. lam-2 activity is required for embryonic development and for regulation of muscle arm extension. loss of lam-2 function via large-scale RNAi screens results in embryonic, larval, and adult lethality, sterility, body morphology defects, and abnormal locomotion. [Source: WormBase] |
| C54D1.5 | C54D1.5.2 | lam-2 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | lam-2 encodes a laminin gamma subunit. lam-2 activity is required for embryonic development and for regulation of muscle arm extension. loss of lam-2 function via large-scale RNAi screens results in embryonic, larval, and adult lethality, sterility, body morphology defects, and abnormal locomotion. [Source: WormBase] |
| C54G7.4 | C54G7.4 | ifta-1 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | ifta-1 encodes a evolutionarily conserved protein found in ciliated unicellular and multicellular organisms including humans and is absent in non-ciliated organisms like yeast. IFTA-1 contains a X-box and several N-terminal WD repeats. ifta-1 is required for retrograde intraflagellar transport and likely associates with, or is a core component of the IFT-A subcomplex. ifta-1 is also required for the proper functioning and assembly of cilia. IFTA-1 localizes to the basal body of the cilium. [Source: WormBase] |
| D1009.1 | D1009.1a | acs-22 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | acs-22 encodes a protein homologous to the mammalian FATP1 and FATP4 fatty acid transport proteins (FATP)/very long chain fatty acid acyl-CoA synthetases. acs-22 functions redundantly with acs-20 to regulate formation of the cuticle surface barrier that prevents penetration of small molecules. acs-22 may affect cuticle development via its role in incorporation of very long chain fatty acids, but not other fatty acids, into sphingomyelin. an acs-22::gfp promoter fusion is expressed strongly in the intestine, with weaker expression seen in the pharynx, head neurons, and hypodermis. [Source: WormBase] |
| D1009.3 | D1009.3a | D1009.3 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| D1009.3 | D1009.3b | D1009.3 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| D1025.8 | D1025.8 | nspc-17 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| D1053.1 | D1053.1 | gst-42 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | gst-42 is orthologous to the human gene GLUTATHIONE TRANSFERASE ZETA-1 (also known as MALEYLACETOACETATE ISOMERASE. GSTZ1. OMIM:603758), which when mutated is thought to lead to a variety of type I tyrosinemia. [Source: WormBase] |
| F01G12.5 | F01G12.5a | let-2 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | let-2 encodes an alpha-2 type IV collagen, probably most closely equivalent to the human gene COL4A2 (OMIM:120090) on the basis of biological function. LET-2 is required for embryonic development and is a component of the basement membrane between muscle and hypodermis. LET-2 interacts with UNC-105, a mechanosensory ion channel of the degenerin ion channel superfamily that is expressed in muscle and required for normal growth, muscle contraction, and muscle organization. let-2 activity is governed, in part, by ASD-2-mediated, developmentally regulated alternative splicing in which exon nine is used in embryos and exon 10 in late larvae and adults. [Source: WormBase] |
| F02C12.4 | F02C12.4 | F02C12.4 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| F02D10.5 | F02D10.5 | flr-1 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | flr-1 encodes an ion channel that belongs to the DEG/ENaC sodium channel superfamily. flr-1 activity is essential for normal defecation rhythm, growth rates, expulsion, and dauer larvae formation. a rescuing FLR-1::GFP reporter is expressed in the intestine from embryonic to adult stages where it localizes to the membranes facing the inner lumen as well as to part of the lateral membrane between intestinal cells. [Source: WormBase] |
| F07D10.1 | F07D10.1.1 | rpl-11.2 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | rpl-11.2 encodes a large ribosomal subunit L11 protein. by homology, RPL-11.2 is predicted to function in protein biosynthesis. [Source: WormBase] |
| F07D10.1 | F07D10.1.2 | rpl-11.2 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | rpl-11.2 encodes a large ribosomal subunit L11 protein. by homology, RPL-11.2 is predicted to function in protein biosynthesis. [Source: WormBase] |
| F08B12.3 | F08B12.3c | slo-2 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | slo-2 encodes a high conductance, sodium-activated potassium channel. when expressed in Xenopus oocytes, SLO-2 exhibits a synergistic dependence on both chloride and calcium ions for activation. expression of a dominant negative SLO-2 mutant can interfere with activity of SLO-1, a second high conductance potassium channel, suggesting that the two channels can form functional heteromultimers. a SLO-2::GFP fusion protein is expressed in body wall, vulval, and pharyngeal/intestinal valve muscles, nerve ring processes, and some motor neurons in the ventral nerve cord. SLO-2 expression largely overlaps with that of SLO-1. [Source: WormBase] |
| F08C6.5 | F08C6.5 | F08C6.5 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| F09B12.6 | F09B12.6 | flr-4 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | flr-4 encodes a predicted Ser/Thr protein kinase that affects sensitivity to fluoride ion, growth, defecation cycle periods, dauer formation. expressed in the intestine, the AUA neurons, the pharyngeal isthmus, and in the excretory canal in larval stages. [Source: WormBase] |
| F10D7.5 | F10D7.5a | F10D7.5 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | F10D7.5 encodes an ortholog of Drosophila NEURALIZED, and thus may participate in GLP-1/LIN-12 signalling. the promoter or 5' protein-coding regions of F10D7.5 are bound by DAF-16 in vivo, and F10D7.5 expression drops by roughly one-half in daf-16(mu86) mutants. [Source: WormBase] |
| F11C7.6 | F11C7.6a | F11C7.6 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| F11C7.6 | F11C7.6b | F11C7.6 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| F13D2.3 | F13D2.3 | gnrr-7 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| F13E6.2 | F13E6.2 | F13E6.2 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| F14B8.5 | F14B8.5a.1 | F14B8.5 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| F14B8.5 | F14B8.5a.2 | F14B8.5 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| F14B8.5 | F14B8.5b | F14B8.5 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| F14B8.5 | F14B8.5c.1 | F14B8.5 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl |