| Gene ID | Transcript ID | Common Gene Name | # of miRNA targets for specified miRNAs | Chromosome | Strand Direction | Transcript Link to view miRNA target predictions | Gene Link | Description |
|---|---|---|---|---|---|---|---|---|
| AC8.10 | AC8.10 | AC8.10 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| AC8.3 | AC8.3 | AC8.3 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| AH9.1 | AH9.1 | AH9.1 | 3 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| B0198.3 | B0198.3a | B0198.3 | 3 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| B0294.3 | B0294.3 | B0294.3 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. [Source: WormBase] |
| B0302.1 | B0302.1a.1 | kin-25 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | kin-25 encodes a nonreceptor tyrosine kinase that is a member of the Ack subfamily of cytoplasmic tyrosine kinases. [Source: WormBase] |
| B0302.1 | B0302.1a.2 | kin-25 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | kin-25 encodes a nonreceptor tyrosine kinase that is a member of the Ack subfamily of cytoplasmic tyrosine kinases. [Source: WormBase] |
| B0302.1 | B0302.1b | kin-25 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | kin-25 encodes a nonreceptor tyrosine kinase that is a member of the Ack subfamily of cytoplasmic tyrosine kinases. [Source: WormBase] |
| B0344.2 | B0344.2 | wrt-9 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | wrt-9 encodes a hedgehog-like protein, with an N-terminal signal sequence, a Wart domain, and a C-terminal region of proline-rich, low-complexity sequence. the Wart domain is predicted to form a cysteine-crosslinked protein involved in intercellular signalling, and it has subtle similarity to the N-terminal Hedge domain of HEDGEHOG proteins. WRT-9 has no obvious function in RNAi assays. [Source: WormBase] |
| B0395.2 | B0395.2 | mboa-1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | mboa-1 encodes a putative acyl-Coenzyme A:cholesterol ('sterol') O-acyltransferase, orthologous to human SOAT1 (OMIM:102642). MBOA-1 is required for normal locomotion and normally long lifespan in mass RNAi assays. mboa-1 is expressed in the seam cells and nervous systems of larvae and adults, and in the adult reproductive system. [Source: WormBase] |
| B0395.3 | B0395.3.1 | B0395.3 | 3 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | B0395.3 is orthologous to the human gene CHOLINE ACETYLTRANSFERASE ISOFORM R (CHAT. OMIM:118490), which when mutated leads to disease. [Source: WormBase] |
| B0395.3 | B0395.3.2 | B0395.3 | 2 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | B0395.3 is orthologous to the human gene CHOLINE ACETYLTRANSFERASE ISOFORM R (CHAT. OMIM:118490), which when mutated leads to disease. [Source: WormBase] |
| B0416.1 | B0416.1 | B0416.1 | 3 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| B0416.6 | B0416.6 | gly-13 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | gly-13 encodes an experimentally verified UDP-N-acetylglucosamine alpha-3-D-mannoside beta-1,2-N-acetylglucosaminyltransferase I (GnT I), that is the primary GnT I enzyme in vivo, and that can act on unusual substrates. gly-13 is expressed throughout development in many cell types. gly-13 has no obvious function in vivo, since a deletion allele of gly-13 is phenotypically normal even as a double or triple mutant with gly-12 and gly-14. [Source: WormBase] |
| B0563.4 | B0563.4.1 | tmbi-4 | 2 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| B0563.4 | B0563.4.2 | tmbi-4 | 2 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| B0563.6 | B0563.6a | B0563.6 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| B0563.6 | B0563.6b.1 | B0563.6 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| B0563.6 | B0563.6b.2 | B0563.6 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| B0563.6 | B0563.6c | B0563.6 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| B0563.7 | B0563.7 | B0563.7 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| B0563.8 | B0563.8 | B0563.8 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C01C4.2 | C01C4.2 | C01C4.2 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C01C4.3 | C01C4.3b | C01C4.3 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | C01C4.3 encodes a serine/threonine protein kinase. [Source: WormBase] |
| C02B4.1 | C02B4.1 | adt-1 | 2 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | The adt-1 gene encodes a metalloproteinase with disintegrin-like and metalloproteinase with thrombospondin type I motifs (ADAMTS) that is required for male tail morphogenesis. [Source: WormBase] |
| C02B8.3 | C02B8.3 | C02B8.3 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C02B8.6 | C02B8.6 | C02B8.6 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C02C6.1 | C02C6.1a | dyn-1 | 3 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | dyn-1 encodes the C. elegans ortholog of the dynamin GTPase. dyn-1 activity is required for endocytosis, synaptic vesicle recycling, cytokinesis, and the CED-1 pathway that regulates engulfment and degradation of apoptotic cells. mutations in dyn-1 affect locomotion, egg-laying, defecation, and embryonic development, indicating that dyn-1's endocytic function is required for a number of diverse processes. dyn-1 reporter fusion constructs are expressed in motor neurons, intestinal cells, and pharyngeal muscle. [Source: WormBase] |
| C02C6.1 | C02C6.1b | dyn-1 | 3 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | dyn-1 encodes the C. elegans ortholog of the dynamin GTPase. dyn-1 activity is required for endocytosis, synaptic vesicle recycling, cytokinesis, and the CED-1 pathway that regulates engulfment and degradation of apoptotic cells. mutations in dyn-1 affect locomotion, egg-laying, defecation, and embryonic development, indicating that dyn-1's endocytic function is required for a number of diverse processes. dyn-1 reporter fusion constructs are expressed in motor neurons, intestinal cells, and pharyngeal muscle. [Source: WormBase] |
| C02C6.3 | C02C6.3a | C02C6.3 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C02F12.1 | C02F12.1a | tsp-17 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C02F12.1 | C02F12.1b | tsp-17 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C02F12.4 | C02F12.4 | tag-52 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C02F12.7 | C02F12.7 | tag-278 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C02F12.9 | C02F12.9 | C02F12.9 | 2 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C02H7.3 | C02H7.3a | aex-3 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | aex-3 encodes a guanine nucleotide exchange factor for the rab-3 GTPase that is orthologous to human MAP kinase activating protein containing death domain (MADD, OMIM:603584). AEX-3 is required for intracellular vesicle trafficking as well as synaptic vesicle release and interacts with CAB-1 and RAB-3 to regulate separate pathways for neural activities such as defecation and male mating, respectively. AEX-3 is also required for egg laying and locomotion. AEX-3 is expressed in nearly all neurons. [Source: WormBase] |
| C03A3.1 | C03A3.1b | C03A3.1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C03A3.2 | C03A3.2.1 | C03A3.2 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C03A3.2 | C03A3.2.2 | C03A3.2 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C03A3.3 | C03A3.3 | C03A3.3 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C03F11.2 | C03F11.2 | C03F11.2 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C03F11.3 | C03F11.3 | scav-1 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C03G5.1 | C03G5.1.1 | sdha-1 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | sdha-1 is orthologous to the human gene SUCCINATE DEHYDROGENASE COMPLEX, SUBUNIT A, FLAVOPROTEIN (SDHA. OMIM:600857), which when mutated leads to complex II mitochondrial respiratory chain deficiency presenting as Leigh syndrome. [Source: WormBase] |
| C03G5.1 | C03G5.1.2 | sdha-1 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | sdha-1 is orthologous to the human gene SUCCINATE DEHYDROGENASE COMPLEX, SUBUNIT A, FLAVOPROTEIN (SDHA. OMIM:600857), which when mutated leads to complex II mitochondrial respiratory chain deficiency presenting as Leigh syndrome. [Source: WormBase] |
| C03H12.1 | C03H12.1 | C03H12.1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C04A11.1 | C04A11.1 | C04A11.1 | 2 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C04A11.2 | C04A11.2 | C04A11.2 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C04A11.3 | C04A11.3 | gck-4 | 4 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C04A11.4 | C04A11.4 | adm-2 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | adm-2 encodes a protein containing a snake venom disintegrin-domain and a metalloprotease-like domain (i.e., a protein of the ADAM family). like ADM-1, ADM-2 is homologous to a mammalian sperm glycoprotein (PH-30/fertilin) implicated in sperm-egg fusion, and ADM-2 might thus be a fusogenic protein mediating the merging of plasma membranes during development. [Source: WormBase] |
| C04A11.5 | C04A11.5.1 | C04A11.5 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C04A11.5 | C04A11.5.2 | C04A11.5 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C04B4.2 | C04B4.2 | C04B4.2 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C04B4.3 | C04B4.3 | lips-2 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C04C11.2 | C04C11.2.1 | arrd-25 | 2 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C04C11.2 | C04C11.2.2 | arrd-25 | 2 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C04E7.1 | C04E7.1 | C04E7.1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C04E7.2 | C04E7.2 | sor-3 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | sor-3 encodes a novel protein that contains an MBT (malignant brain tumor) domain related to the MBT domains found in the Sex comb on midleg (SCM) and Sfmbt Polycomb group proteins. during development, SOR-3 activity is required to specify the correct number of dopaminergic and serotonergic neurons in males, as well as for proper ray neuron axon guidance, distal tip cell migration, and normal body size. SOR-3 activity is necessary for maintaining repression of Hox gene expression, notably that of egl-5 in many head neurons. in regulating neurotransmitter phenotype, sor-3 functions together with sop-2, which also encodes a Polycomb group protein, and members of the TGF-beta signaling pathway. sor-3 and sop-2 also function together to regulate progression through larval development. a SOR-3::GFP reporter fusion is expressed ubiquitously throughout the life cycle and localizes to both the cytoplasm and the nucleus. [Source: WormBase] |
| C04E7.4 | C04E7.4 | C04E7.4 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C04E7.5 | C04E7.5 | C04E7.5 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C04F6.1 | C04F6.1 | vit-5 | 5 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | vit-5 encodes a vitellogenin, a lipid-binding protein precursor related to vertebrate vitellogenins and mammalian ApoB-100, a core LDL particle constituent. by homology, VIT-5 is predicted to function as a lipid transport protein. loss of vit-5 activity via large-scale RNA-mediated interference (RNAi) screens indicates that VIT-5 is required for embryogenesis and normal rates of postembryonic growth. VIT-5 is a major yolk component and is expressed exclusively in the adult hermaphrodite intestine from which it is secreted into the pseudocoelomic space and taken up by oocytes. [Source: WormBase] |
| C04F6.3 | C04F6.3.1 | cht-1 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | cht-1 encodes a chitinase orthologous to human chitinase-1 (OMIM:600031, mutations are associated with chitotriosidase deficiency). CHT-1 is predicted to function as an extracellular O-glycosyl hydrolase that hydrolyzes the glycosidic bond between two or more carbohydrates. in C. elegans, CHT-1 may play a role in embryogenesis, and may also be required for cuticle degradation during molting and degradation of chitin-containing pathogens as part of a host defense mechanism. [Source: WormBase] |
| C04F6.3 | C04F6.3.2 | cht-1 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | cht-1 encodes a chitinase orthologous to human chitinase-1 (OMIM:600031, mutations are associated with chitotriosidase deficiency). CHT-1 is predicted to function as an extracellular O-glycosyl hydrolase that hydrolyzes the glycosidic bond between two or more carbohydrates. in C. elegans, CHT-1 may play a role in embryogenesis, and may also be required for cuticle degradation during molting and degradation of chitin-containing pathogens as part of a host defense mechanism. [Source: WormBase] |
| C04F6.4 | C04F6.4a | unc-78 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | The unc-78 gene encodes a homolog of actin-interacting protein 1 (AIP1) that regulates the ordered assembly of actin and cofilin in myofibrils. [Source: WormBase] |
| C04F6.7 | C04F6.7 | C04F6.7 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C05D9.1 | C05D9.1.1 | snx-1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C05D9.1 | C05D9.1.2 | snx-1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C05D9.1 | C05D9.1.3 | snx-1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C05D9.2 | C05D9.2.1 | lmp-2 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | lmp-2 encodes a transmembrane protein that is one of two C. elegans LAMP (lysosomal associated membrane glycoprotein) homologs. [Source: WormBase] |
| C05D9.2 | C05D9.2.2 | lmp-2 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | lmp-2 encodes a transmembrane protein that is one of two C. elegans LAMP (lysosomal associated membrane glycoprotein) homologs. [Source: WormBase] |
| C05D9.2 | C05D9.2.3 | lmp-2 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | lmp-2 encodes a transmembrane protein that is one of two C. elegans LAMP (lysosomal associated membrane glycoprotein) homologs. [Source: WormBase] |
| C05E11.4 | C05E11.4 | amt-1 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | amt-1 encodes a transmembrane transporter that by homology, is predicted to transport ammonium ions across the plasma membrane. as loss of amt-1 activity via large-scale RNAi screens does not result in any obvious abnormalities, the precise role of AMT-1 in C. elegans development and/or behavior is not yet known. [Source: WormBase] |
| C05E7.2 | C05E7.2 | C05E7.2 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C05G5.1 | C05G5.1 | C05G5.1 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C05G5.2 | C05G5.2 | C05G5.2 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C05G5.4 | C05G5.4.1 | C05G5.4 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C05G5.4 | C05G5.4.2 | C05G5.4 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C05G5.5 | C05G5.5 | C05G5.5 | 2 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C06E2.1 | C06E2.1 | C06E2.1 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C06G1.2 | C06G1.2 | C06G1.2 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C06G1.4 | C06G1.4.1 | ain-1 | 3 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | ain-1 encodes an unfamiliar protein synergistically required, with LIN-31, for the normal timing of vulval differentiation, independently of LET-60/RAS, and parallel to or downstream of LIN-14/LIN-28/HBL-1. AIN-1 is expressed in cytoplasmic foci (that are probably P bodies) in several tissues, including vulval precursor cells and neurons. AIN-1 coimmunoprecipitates with DCR-1 and ALG-1, also binds ALG-1 in vitro, and does not require DNA or RNA for its binding. in vivo, AIN-1 targets ALG-1 to cytoplasmic foci, in which it colocalizes with DCAP-2. AIN-1 is likely to be a RISC component, since anti-AIN-1 antibodies precipitate 29 different miRNAs, including mir-2, mir-52, mir-58, mir-71, mir-77, and mir-239a. ain-1(ku322) mutants are essentially wild-type, except for sporadically gapped alae and excess seam cell nuclei arising from retarded seam cell fusion. more prominently, ain-1(ku322) suppresses the multivulva phenotype of lin-31(n1053) mutations, while strongly enhancing lin-31(n1053)'s egg-laying defect. the cellular basis of lin-31(n1053).ain-1(ku322) phenotypes is a delay in vulval development in L4 larvae not seen with either mutation alone. ain-1(ku322) has no effect on let-60(n1046) or lin-3(e1275) mutations. ain-1(ku322) suppresses the precocious vulval development of lin-14(RNAi), lin-28 mutants, and hbl-1(RNAi). alg-1 or alg-1 ain-1 mutant alae resemble ain-1 alae, indicating that ALG-1 and AIN-1 act in a common genetic pathway. AIN-1 is homologous to Brugia malayi 14748.m00068, 14052.m00191, and 14963.m01790, and paralogous to C. elegans B0041.2. AIN-1 and its nematode homologs have weak similarity to human TNRC6A (GW182. OMIM:610739) and Drosophila GAWKY. [Source: WormBase] |
| C06G1.4 | C06G1.4.2 | ain-1 | 3 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | ain-1 encodes an unfamiliar protein synergistically required, with LIN-31, for the normal timing of vulval differentiation, independently of LET-60/RAS, and parallel to or downstream of LIN-14/LIN-28/HBL-1. AIN-1 is expressed in cytoplasmic foci (that are probably P bodies) in several tissues, including vulval precursor cells and neurons. AIN-1 coimmunoprecipitates with DCR-1 and ALG-1, also binds ALG-1 in vitro, and does not require DNA or RNA for its binding. in vivo, AIN-1 targets ALG-1 to cytoplasmic foci, in which it colocalizes with DCAP-2. AIN-1 is likely to be a RISC component, since anti-AIN-1 antibodies precipitate 29 different miRNAs, including mir-2, mir-52, mir-58, mir-71, mir-77, and mir-239a. ain-1(ku322) mutants are essentially wild-type, except for sporadically gapped alae and excess seam cell nuclei arising from retarded seam cell fusion. more prominently, ain-1(ku322) suppresses the multivulva phenotype of lin-31(n1053) mutations, while strongly enhancing lin-31(n1053)'s egg-laying defect. the cellular basis of lin-31(n1053).ain-1(ku322) phenotypes is a delay in vulval development in L4 larvae not seen with either mutation alone. ain-1(ku322) has no effect on let-60(n1046) or lin-3(e1275) mutations. ain-1(ku322) suppresses the precocious vulval development of lin-14(RNAi), lin-28 mutants, and hbl-1(RNAi). alg-1 or alg-1 ain-1 mutant alae resemble ain-1 alae, indicating that ALG-1 and AIN-1 act in a common genetic pathway. AIN-1 is homologous to Brugia malayi 14748.m00068, 14052.m00191, and 14963.m01790, and paralogous to C. elegans B0041.2. AIN-1 and its nematode homologs have weak similarity to human TNRC6A (GW182. OMIM:610739) and Drosophila GAWKY. [Source: WormBase] |
| C06G1.5 | C06G1.5 | C06G1.5 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C07A12.1 | C07A12.1a | ham-2 | 3 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | The ham-2 gene encodes a C2H2 zinc finger-containing protein required for proper migration of the hermaphrodite-specific neurons (HSNs) and proper attachment of the pharynx to the nose. HAM-2 is expressed in the nuclei of the HSNs during migration, and acts downstream of EGL-5, a posterior group Hox protein, in HSN specification. HAM-2 acts redundantly with UNC-86 to downregulate UNC-43 expression in the HSNs after migration is complete. [Source: WormBase] |
| C07A12.1 | C07A12.1b | ham-2 | 3 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | The ham-2 gene encodes a C2H2 zinc finger-containing protein required for proper migration of the hermaphrodite-specific neurons (HSNs) and proper attachment of the pharynx to the nose. HAM-2 is expressed in the nuclei of the HSNs during migration, and acts downstream of EGL-5, a posterior group Hox protein, in HSN specification. HAM-2 acts redundantly with UNC-86 to downregulate UNC-43 expression in the HSNs after migration is complete. [Source: WormBase] |
| C07A12.1 | C07A12.1c | ham-2 | 2 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | The ham-2 gene encodes a C2H2 zinc finger-containing protein required for proper migration of the hermaphrodite-specific neurons (HSNs) and proper attachment of the pharynx to the nose. HAM-2 is expressed in the nuclei of the HSNs during migration, and acts downstream of EGL-5, a posterior group Hox protein, in HSN specification. HAM-2 acts redundantly with UNC-86 to downregulate UNC-43 expression in the HSNs after migration is complete. [Source: WormBase] |
| C07A12.3 | C07A12.3a | nhr-35 | 2 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C07A12.4 | C07A12.4a.1 | pdi-2 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C07A12.4 | C07A12.4a.2 | pdi-2 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C07A12.4 | C07A12.4b | pdi-2 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C07A12.4 | C07A12.4c | pdi-2 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C07A12.5 | C07A12.5a | spr-3 | 2 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C07A12.7 | C07A12.7a.1 | C07A12.7 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C07A12.7 | C07A12.7a.2 | C07A12.7 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C07A12.7 | C07A12.7b | C07A12.7 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C07A12.7 | C07A12.7c.1 | C07A12.7 | 1 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl | |
| C07A4.1 | C07A4.1 | tiar-3 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C07A4.2 | C07A4.2 | C07A4.2 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | |
| C07B5.5 | C07B5.5 | nuc-1 | 2 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | The nuc-1 gene encodes a DNase II homolog similar to mammalian and Drosophila DNaseII enzymes and is required for DNA degradation during apoptosis as well as for degradation of dietary DNA during normal feeding. during apoptosis, NUC-1 functions in apoptotic cells at an intermediate stage of DNA degradation, after the killing step, but prior to cell-corpse engulfment. [Source: WormBase] |
| C08A9.1 | C08A9.1 | sod-3 | 1 | 23 X | Forward | View as cDNA map | View as Table | Internal | Ensembl | sod-3 encodes a iron/manganese superoxide dismutase, predicted to be mitochondrial, that might defend against oxidative stress and promote normal lifespan. sod-3 mRNA levels are diminished by mutation of daf-16 and chromatin immunoprecipitation (ChIP) studies demonstrate that DAF-16 can directly bind the sod-3 promoter. heterologously expressed SOD-3 in E. coli protects against methyl viologen-induced oxidative stress. [Source: WormBase] |
| C08A9.3 | C08A9.3a | C08A9.3 | 5 | 23 X | Reverse | View as cDNA map | View as Table | Internal | Ensembl |