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Genome: Drosophila Melanogaster | mRNA | miRBase 18 (Nov. 2011), ENSEMBL 65 (Dec. 2011) and RNA22v1.0
Description: List of transcripts that are targeted by all of the below miRNA identifiers simultaneously
miRNA's: dme-miR-1-3p (MIMAT0000105)
Filtering By: Base pair min value: 12 | Folding energy max value (Kcal/mol): -21 | Min miRNA targets: 1


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Gene IDTranscript IDCommon Gene Name# of miRNA targets
for specified miRNAs
ChromosomeStrand DirectionTranscript Link to view miRNA target predictionsGene LinkDescription
FBgn0002521FBtr0089204pho24ReverseView as cDNA map |
View as Table
Internal |
Ensembl
pleiohomeotic [Source:FlyBase gene name;Acc:FBgn0002521]
FBgn0002521FBtr0089205pho24ReverseView as cDNA map |
View as Table
Internal |
Ensembl
pleiohomeotic [Source:FlyBase gene name;Acc:FBgn0002521]
FBgn0004607FBtr0089070zfh234ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Zn finger homeodomain 2 [Source:FlyBase gene name;Acc:FBgn0004607]
FBgn0004607FBtr0307167zfh234ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Zn finger homeodomain 2 [Source:FlyBase gene name;Acc:FBgn0004607]
FBgn0004624FBtr0089217CaMKII44ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Calcium/calmodulin-dependent protein kinase II [Source:FlyBase gene name;Acc:FBgn0004624]
FBgn0004624FBtr0089218CaMKII24ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Calcium/calmodulin-dependent protein kinase II [Source:FlyBase gene name;Acc:FBgn0004624]
FBgn0004624FBtr0089219CaMKII24ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Calcium/calmodulin-dependent protein kinase II [Source:FlyBase gene name;Acc:FBgn0004624]
FBgn0004624FBtr0100146CaMKII44ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Calcium/calmodulin-dependent protein kinase II [Source:FlyBase gene name;Acc:FBgn0004624]
FBgn0004624FBtr0100147CaMKII44ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Calcium/calmodulin-dependent protein kinase II [Source:FlyBase gene name;Acc:FBgn0004624]
FBgn0004624FBtr0100148CaMKII44ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Calcium/calmodulin-dependent protein kinase II [Source:FlyBase gene name;Acc:FBgn0004624]
FBgn0004624FBtr0300378CaMKII24ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Calcium/calmodulin-dependent protein kinase II [Source:FlyBase gene name;Acc:FBgn0004624]
FBgn0004859FBtr0089178ci24ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cubitus interruptus [Source:FlyBase gene name;Acc:FBgn0004859]
FBgn0004859FBtr0306168ci24ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cubitus interruptus [Source:FlyBase gene name;Acc:FBgn0004859]
FBgn0004859FBtr0308074ci24ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cubitus interruptus [Source:FlyBase gene name;Acc:FBgn0004859]
FBgn0005561FBtr0089327sv44ForwardView as cDNA map |
View as Table
Internal |
Ensembl
shaven [Source:FlyBase gene name;Acc:FBgn0005561]
FBgn0005561FBtr0089328sv44ForwardView as cDNA map |
View as Table
Internal |
Ensembl
shaven [Source:FlyBase gene name;Acc:FBgn0005561]
FBgn0005561FBtr0100342sv44ForwardView as cDNA map |
View as Table
Internal |
Ensembl
shaven [Source:FlyBase gene name;Acc:FBgn0005561]
FBgn0005561FBtr0100343sv44ForwardView as cDNA map |
View as Table
Internal |
Ensembl
shaven [Source:FlyBase gene name;Acc:FBgn0005561]
FBgn0005561FBtr0100344sv44ForwardView as cDNA map |
View as Table
Internal |
Ensembl
shaven [Source:FlyBase gene name;Acc:FBgn0005561]
FBgn0005561FBtr0100345sv44ForwardView as cDNA map |
View as Table
Internal |
Ensembl
shaven [Source:FlyBase gene name;Acc:FBgn0005561]
FBgn0005561FBtr0100346sv44ForwardView as cDNA map |
View as Table
Internal |
Ensembl
shaven [Source:FlyBase gene name;Acc:FBgn0005561]
FBgn0005561FBtr0301563sv24ForwardView as cDNA map |
View as Table
Internal |
Ensembl
shaven [Source:FlyBase gene name;Acc:FBgn0005561]
FBgn0005666FBtr0089793bt134ForwardView as cDNA map |
View as Table
Internal |
Ensembl
bent [Source:FlyBase gene name;Acc:FBgn0005666]
FBgn0005666FBtr0301340bt144ForwardView as cDNA map |
View as Table
Internal |
Ensembl
bent [Source:FlyBase gene name;Acc:FBgn0005666]
FBgn0005666FBtr0301341bt144ForwardView as cDNA map |
View as Table
Internal |
Ensembl
bent [Source:FlyBase gene name;Acc:FBgn0005666]
FBgn0010217FBtr0089186ATPsyn-beta14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
ATP synthase-beta [Source:FlyBase gene name;Acc:FBgn0010217]
FBgn0011642FBtr0089210Zyx102EF34ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Zyx102EF [Source:FlyBase gene name;Acc:FBgn0011642]
FBgn0011642FBtr0089211Zyx102EF44ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Zyx102EF [Source:FlyBase gene name;Acc:FBgn0011642]
FBgn0011642FBtr0089212Zyx102EF44ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Zyx102EF [Source:FlyBase gene name;Acc:FBgn0011642]
FBgn0011642FBtr0089213Zyx102EF34ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Zyx102EF [Source:FlyBase gene name;Acc:FBgn0011642]
FBgn0011642FBtr0089214Zyx102EF44ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Zyx102EF [Source:FlyBase gene name;Acc:FBgn0011642]
FBgn0011642FBtr0089215Zyx102EF34ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Zyx102EF [Source:FlyBase gene name;Acc:FBgn0011642]
FBgn0011642FBtr0089216Zyx102EF44ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Zyx102EF [Source:FlyBase gene name;Acc:FBgn0011642]
FBgn0011747FBtr0089171Ank64ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ankyrin [Source:FlyBase gene name;Acc:FBgn0011747]
FBgn0011747FBtr0089172Ank54ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ankyrin [Source:FlyBase gene name;Acc:FBgn0011747]
FBgn0011747FBtr0089173Ank54ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ankyrin [Source:FlyBase gene name;Acc:FBgn0011747]
FBgn0011747FBtr0089174Ank54ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ankyrin [Source:FlyBase gene name;Acc:FBgn0011747]
FBgn0011747FBtr0300497Ank54ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ankyrin [Source:FlyBase gene name;Acc:FBgn0011747]
FBgn0011747FBtr0300498Ank54ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ankyrin [Source:FlyBase gene name;Acc:FBgn0011747]
FBgn0016126FBtr0089063CaMKI54ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Calcium/calmodulin-dependent protein kinase I [Source:FlyBase gene name;Acc:FBgn0016126]
FBgn0016126FBtr0089064CaMKI44ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Calcium/calmodulin-dependent protein kinase I [Source:FlyBase gene name;Acc:FBgn0016126]
FBgn0016126FBtr0089065CaMKI44ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Calcium/calmodulin-dependent protein kinase I [Source:FlyBase gene name;Acc:FBgn0016126]
FBgn0016126FBtr0089066CaMKI44ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Calcium/calmodulin-dependent protein kinase I [Source:FlyBase gene name;Acc:FBgn0016126]
FBgn0016126FBtr0089067CaMKI44ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Calcium/calmodulin-dependent protein kinase I [Source:FlyBase gene name;Acc:FBgn0016126]
FBgn0016126FBtr0089068CaMKI44ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Calcium/calmodulin-dependent protein kinase I [Source:FlyBase gene name;Acc:FBgn0016126]
FBgn0016126FBtr0089069CaMKI44ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Calcium/calmodulin-dependent protein kinase I [Source:FlyBase gene name;Acc:FBgn0016126]
FBgn0017545FBtr0308296RpS3A14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ribosomal protein S3A [Source:FlyBase gene name;Acc:FBgn0017545]
FBgn0019650FBtr0089185toy14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
twin of eyeless [Source:FlyBase gene name;Acc:FBgn0019650]
FBgn0019985FBtr0089184mGluRA14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
metabotropic glutamate receptor [Source:FlyBase gene name;Acc:FBgn0019985]
FBgn0022361FBtr0089993Pur-alpha14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Purine-rich binding protein-alpha [Source:FlyBase gene name;Acc:FBgn0022361]
FBgn0022361FBtr0089994Pur-alpha14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Purine-rich binding protein-alpha [Source:FlyBase gene name;Acc:FBgn0022361]
FBgn0022361FBtr0089995Pur-alpha24ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Purine-rich binding protein-alpha [Source:FlyBase gene name;Acc:FBgn0022361]
FBgn0022361FBtr0089996Pur-alpha24ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Purine-rich binding protein-alpha [Source:FlyBase gene name;Acc:FBgn0022361]
FBgn0023213FBtr0089243eIF4G14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
eukaryotic translation initiation factor 4G [Source:FlyBase gene name;Acc:FBgn0023213]
FBgn0023213FBtr0112904eIF4G14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
eukaryotic translation initiation factor 4G [Source:FlyBase gene name;Acc:FBgn0023213]
FBgn0023213FBtr0289951eIF4G14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
eukaryotic translation initiation factor 4G [Source:FlyBase gene name;Acc:FBgn0023213]
FBgn0024728FBtr0089090Slip114ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Slip1 [Source:FlyBase gene name;Acc:FBgn0024728]
FBgn0024913FBtr0089209Actbeta24ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Activin-beta [Source:FlyBase gene name;Acc:FBgn0024913]
FBgn0025726FBtr0089245unc-1354ReverseView as cDNA map |
View as Table
Internal |
Ensembl
unc-13 [Source:FlyBase gene name;Acc:FBgn0025726]
FBgn0025726FBtr0089246unc-1354ReverseView as cDNA map |
View as Table
Internal |
Ensembl
unc-13 [Source:FlyBase gene name;Acc:FBgn0025726]
FBgn0025726FBtr0089247unc-1364ReverseView as cDNA map |
View as Table
Internal |
Ensembl
unc-13 [Source:FlyBase gene name;Acc:FBgn0025726]
FBgn0025740FBtr0089179plexB24ReverseView as cDNA map |
View as Table
Internal |
Ensembl
plexin B [Source:FlyBase gene name;Acc:FBgn0025740]
FBgn0025740FBtr0308297plexB24ReverseView as cDNA map |
View as Table
Internal |
Ensembl
plexin B [Source:FlyBase gene name;Acc:FBgn0025740]
FBgn0025741FBtr0089223plexA44ReverseView as cDNA map |
View as Table
Internal |
Ensembl
plexin A [Source:FlyBase gene name;Acc:FBgn0025741]
FBgn0025741FBtr0089224plexA44ReverseView as cDNA map |
View as Table
Internal |
Ensembl
plexin A [Source:FlyBase gene name;Acc:FBgn0025741]
FBgn0025741FBtr0089225plexA34ReverseView as cDNA map |
View as Table
Internal |
Ensembl
plexin A [Source:FlyBase gene name;Acc:FBgn0025741]
FBgn0025741FBtr0089226plexA44ReverseView as cDNA map |
View as Table
Internal |
Ensembl
plexin A [Source:FlyBase gene name;Acc:FBgn0025741]
FBgn0025741FBtr0100296plexA14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
plexin A [Source:FlyBase gene name;Acc:FBgn0025741]
FBgn0025936FBtr0089082Eph34ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Eph receptor tyrosine kinase [Source:FlyBase gene name;Acc:FBgn0025936]
FBgn0025936FBtr0089083Eph24ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Eph receptor tyrosine kinase [Source:FlyBase gene name;Acc:FBgn0025936]
FBgn0025936FBtr0089084Eph34ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Eph receptor tyrosine kinase [Source:FlyBase gene name;Acc:FBgn0025936]
FBgn0025936FBtr0089085Eph24ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Eph receptor tyrosine kinase [Source:FlyBase gene name;Acc:FBgn0025936]
FBgn0025936FBtr0089086Eph34ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Eph receptor tyrosine kinase [Source:FlyBase gene name;Acc:FBgn0025936]
FBgn0025936FBtr0301285Eph24ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Eph receptor tyrosine kinase [Source:FlyBase gene name;Acc:FBgn0025936]
FBgn0026199FBtr0089092myoglianin24ReverseView as cDNA map |
View as Table
Internal |
Ensembl
myoglianin [Source:FlyBase gene name;Acc:FBgn0026199]
FBgn0026199FBtr0089093myoglianin24ReverseView as cDNA map |
View as Table
Internal |
Ensembl
myoglianin [Source:FlyBase gene name;Acc:FBgn0026199]
FBgn0026199FBtr0089094myoglianin24ReverseView as cDNA map |
View as Table
Internal |
Ensembl
myoglianin [Source:FlyBase gene name;Acc:FBgn0026199]
FBgn0026199FBtr0089095myoglianin24ReverseView as cDNA map |
View as Table
Internal |
Ensembl
myoglianin [Source:FlyBase gene name;Acc:FBgn0026199]
FBgn0026262FBtr0089110bip224ReverseView as cDNA map |
View as Table
Internal |
Ensembl
bip2 [Source:FlyBase gene name;Acc:FBgn0026262]
FBgn0026777FBtr0089121Rad2314ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Rad23 [Source:FlyBase gene name;Acc:FBgn0026777]
FBgn0026777FBtr0089122Rad2314ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Rad23 [Source:FlyBase gene name;Acc:FBgn0026777]
FBgn0026869FBtr0089106Thd134ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Thd1 [Source:FlyBase gene name;Acc:FBgn0026869]
FBgn0027101FBtr0100402Dyrk344ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Dyrk3 [Source:FlyBase gene name;Acc:FBgn0027101]
FBgn0027101FBtr0100403Dyrk344ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Dyrk3 [Source:FlyBase gene name;Acc:FBgn0027101]
FBgn0027101FBtr0100404Dyrk344ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Dyrk3 [Source:FlyBase gene name;Acc:FBgn0027101]
FBgn0027101FBtr0100405Dyrk344ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Dyrk3 [Source:FlyBase gene name;Acc:FBgn0027101]
FBgn0027101FBtr0100406Dyrk344ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Dyrk3 [Source:FlyBase gene name;Acc:FBgn0027101]
FBgn0028996FBtr0089104onecut34ReverseView as cDNA map |
View as Table
Internal |
Ensembl
onecut [Source:FlyBase gene name;Acc:FBgn0028996]
FBgn0039889FBtr0089153CG221914ReverseView as cDNA map |
View as Table
Internal |
Ensembl
FBgn0039889FBtr0308248CG221914ReverseView as cDNA map |
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Internal |
Ensembl
FBgn0039890FBtr0089146CG231624ReverseView as cDNA map |
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Internal |
Ensembl
FBgn0039890FBtr0089147CG231624ReverseView as cDNA map |
View as Table
Internal |
Ensembl
FBgn0039890FBtr0089148CG231624ReverseView as cDNA map |
View as Table
Internal |
Ensembl
FBgn0039890FBtr0089149CG231634ReverseView as cDNA map |
View as Table
Internal |
Ensembl
FBgn0039890FBtr0089150CG231634ReverseView as cDNA map |
View as Table
Internal |
Ensembl
FBgn0039890FBtr0089151CG231634ReverseView as cDNA map |
View as Table
Internal |
Ensembl
FBgn0039890FBtr0089152CG231634ReverseView as cDNA map |
View as Table
Internal |
Ensembl
FBgn0039890FBtr0308247CG231624ReverseView as cDNA map |
View as Table
Internal |
Ensembl
FBgn0039897FBtr0089116CG167414ForwardView as cDNA map |
View as Table
Internal |
Ensembl
FBgn0039897FBtr0089119CG167414ForwardView as cDNA map |
View as Table
Internal |
Ensembl
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GUI created by the Computational Medicine Center at the Sidney Kimmel Medical College of Thomas Jefferson University
We gratefully acknowledge support of this work by the William M. Keck Foundation