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Genome: Drosophila Melanogaster | mRNA | miRBase 18 (Nov. 2011), ENSEMBL 65 (Dec. 2011) and RNA22v1.0
Description: List of transcripts that are targeted by all of the below miRNA identifiers simultaneously
miRNA's: dme-miR-4-3p (MIMAT0000109)
Filtering By: Base pair min value: 12 | Folding energy max value (Kcal/mol): -21 | Min miRNA targets: 1


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Gene IDTranscript IDCommon Gene Name# of miRNA targets
for specified miRNAs
ChromosomeStrand DirectionTranscript Link to view miRNA target predictionsGene LinkDescription
FBgn0002521FBtr0089204pho14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
pleiohomeotic [Source:FlyBase gene name;Acc:FBgn0002521]
FBgn0010217FBtr0089186ATPsyn-beta14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
ATP synthase-beta [Source:FlyBase gene name;Acc:FBgn0010217]
FBgn0011747FBtr0089171Ank44ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ankyrin [Source:FlyBase gene name;Acc:FBgn0011747]
FBgn0011747FBtr0089172Ank44ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ankyrin [Source:FlyBase gene name;Acc:FBgn0011747]
FBgn0011747FBtr0089173Ank44ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ankyrin [Source:FlyBase gene name;Acc:FBgn0011747]
FBgn0011747FBtr0089174Ank44ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ankyrin [Source:FlyBase gene name;Acc:FBgn0011747]
FBgn0011747FBtr0300497Ank44ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ankyrin [Source:FlyBase gene name;Acc:FBgn0011747]
FBgn0011747FBtr0300498Ank44ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ankyrin [Source:FlyBase gene name;Acc:FBgn0011747]
FBgn0019985FBtr0089184mGluRA24ForwardView as cDNA map |
View as Table
Internal |
Ensembl
metabotropic glutamate receptor [Source:FlyBase gene name;Acc:FBgn0019985]
FBgn0025726FBtr0089245unc-1324ReverseView as cDNA map |
View as Table
Internal |
Ensembl
unc-13 [Source:FlyBase gene name;Acc:FBgn0025726]
FBgn0025726FBtr0089246unc-1324ReverseView as cDNA map |
View as Table
Internal |
Ensembl
unc-13 [Source:FlyBase gene name;Acc:FBgn0025726]
FBgn0026199FBtr0089092myoglianin14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
myoglianin [Source:FlyBase gene name;Acc:FBgn0026199]
FBgn0026199FBtr0089093myoglianin14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
myoglianin [Source:FlyBase gene name;Acc:FBgn0026199]
FBgn0026199FBtr0089094myoglianin14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
myoglianin [Source:FlyBase gene name;Acc:FBgn0026199]
FBgn0026199FBtr0089095myoglianin14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
myoglianin [Source:FlyBase gene name;Acc:FBgn0026199]
FBgn0028996FBtr0089104onecut24ReverseView as cDNA map |
View as Table
Internal |
Ensembl
onecut [Source:FlyBase gene name;Acc:FBgn0028996]
FBgn0039890FBtr0089146CG231614ReverseView as cDNA map |
View as Table
Internal |
Ensembl
FBgn0039890FBtr0089147CG231614ReverseView as cDNA map |
View as Table
Internal |
Ensembl
FBgn0039890FBtr0089148CG231614ReverseView as cDNA map |
View as Table
Internal |
Ensembl
FBgn0039890FBtr0089149CG231614ReverseView as cDNA map |
View as Table
Internal |
Ensembl
FBgn0039890FBtr0089150CG231614ReverseView as cDNA map |
View as Table
Internal |
Ensembl
FBgn0039890FBtr0089151CG231614ReverseView as cDNA map |
View as Table
Internal |
Ensembl
FBgn0039890FBtr0089152CG231614ReverseView as cDNA map |
View as Table
Internal |
Ensembl
FBgn0039890FBtr0308247CG231614ReverseView as cDNA map |
View as Table
Internal |
Ensembl
FBgn0039902FBtr0089132CG217714ReverseView as cDNA map |
View as Table
Internal |
Ensembl
FBgn0039902FBtr0089133CG217714ReverseView as cDNA map |
View as Table
Internal |
Ensembl
FBgn0039902FBtr0114519CG217714ReverseView as cDNA map |
View as Table
Internal |
Ensembl
FBgn0039908FBtr0300342Asator14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Asator [Source:FlyBase gene name;Acc:FBgn0039908]
FBgn0039908FBtr0300343Asator14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Asator [Source:FlyBase gene name;Acc:FBgn0039908]
FBgn0039908FBtr0300344Asator14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Asator [Source:FlyBase gene name;Acc:FBgn0039908]
FBgn0039911FBtr0089079CG190914ForwardView as cDNA map |
View as Table
Internal |
Ensembl
FBgn0039911FBtr0089080CG190914ForwardView as cDNA map |
View as Table
Internal |
Ensembl
FBgn0039915FBtr0089971CG173224ForwardView as cDNA map |
View as Table
Internal |
Ensembl
FBgn0039915FBtr0089972CG173224ForwardView as cDNA map |
View as Table
Internal |
Ensembl
FBgn0039927FBtr0089194CG1115524ForwardView as cDNA map |
View as Table
Internal |
Ensembl
FBgn0039927FBtr0089195CG1115514ForwardView as cDNA map |
View as Table
Internal |
Ensembl
FBgn0039936FBtr0300882CG1114814ReverseView as cDNA map |
View as Table
Internal |
Ensembl
FBgn0039936FBtr0300883CG1114814ReverseView as cDNA map |
View as Table
Internal |
Ensembl
FBgn0039936FBtr0300884CG1114814ReverseView as cDNA map |
View as Table
Internal |
Ensembl
FBgn0039936FBtr0300885CG1114814ReverseView as cDNA map |
View as Table
Internal |
Ensembl
FBgn0039936FBtr0300886CG1114814ReverseView as cDNA map |
View as Table
Internal |
Ensembl
FBgn0040324FBtr0089075Ephrin14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Ephrin [Source:FlyBase gene name;Acc:FBgn0040324]
FBgn0040324FBtr0089076Ephrin14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Ephrin [Source:FlyBase gene name;Acc:FBgn0040324]
FBgn0040324FBtr0089077Ephrin14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Ephrin [Source:FlyBase gene name;Acc:FBgn0040324]
FBgn0040324FBtr0089078Ephrin14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Ephrin [Source:FlyBase gene name;Acc:FBgn0040324]
FBgn0053978FBtr0308250CG3397814ReverseView as cDNA map |
View as Table
Internal |
Ensembl
FBgn0053978FBtr0308251CG3397814ReverseView as cDNA map |
View as Table
Internal |
Ensembl
FBgn0085432FBtr0089160pan14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
pangolin [Source:FlyBase gene name;Acc:FBgn0085432]
FBgn0085432FBtr0089162pan14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
pangolin [Source:FlyBase gene name;Acc:FBgn0085432]
FBgn0085432FBtr0112657pan14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
pangolin [Source:FlyBase gene name;Acc:FBgn0085432]
FBgn0087002FBtr0089188Rfabg14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Retinoid- and fatty acid-binding glycoprotein [Source:FlyBase gene name;Acc:FBgn0087002]
FBgn0259214FBtr0300554PMCA24ReverseView as cDNA map |
View as Table
Internal |
Ensembl
plasma membrane calcium ATPase [Source:FlyBase gene name;Acc:FBgn0259214]
FBgn0259214FBtr0300555PMCA24ReverseView as cDNA map |
View as Table
Internal |
Ensembl
plasma membrane calcium ATPase [Source:FlyBase gene name;Acc:FBgn0259214]
FBgn0259214FBtr0300556PMCA24ReverseView as cDNA map |
View as Table
Internal |
Ensembl
plasma membrane calcium ATPase [Source:FlyBase gene name;Acc:FBgn0259214]
FBgn0259214FBtr0300557PMCA24ReverseView as cDNA map |
View as Table
Internal |
Ensembl
plasma membrane calcium ATPase [Source:FlyBase gene name;Acc:FBgn0259214]
FBgn0259214FBtr0300558PMCA24ReverseView as cDNA map |
View as Table
Internal |
Ensembl
plasma membrane calcium ATPase [Source:FlyBase gene name;Acc:FBgn0259214]
FBgn0259214FBtr0300559PMCA24ReverseView as cDNA map |
View as Table
Internal |
Ensembl
plasma membrane calcium ATPase [Source:FlyBase gene name;Acc:FBgn0259214]
FBgn0259214FBtr0304046PMCA24ReverseView as cDNA map |
View as Table
Internal |
Ensembl
plasma membrane calcium ATPase [Source:FlyBase gene name;Acc:FBgn0259214]
FBgn0259214FBtr0304047PMCA24ReverseView as cDNA map |
View as Table
Internal |
Ensembl
plasma membrane calcium ATPase [Source:FlyBase gene name;Acc:FBgn0259214]
FBgn0259214FBtr0304048PMCA24ReverseView as cDNA map |
View as Table
Internal |
Ensembl
plasma membrane calcium ATPase [Source:FlyBase gene name;Acc:FBgn0259214]
FBgn0259214FBtr0304049PMCA24ReverseView as cDNA map |
View as Table
Internal |
Ensembl
plasma membrane calcium ATPase [Source:FlyBase gene name;Acc:FBgn0259214]
FBgn0259214FBtr0304050PMCA24ReverseView as cDNA map |
View as Table
Internal |
Ensembl
plasma membrane calcium ATPase [Source:FlyBase gene name;Acc:FBgn0259214]
FBgn0000257FBtr0074727car123 XForwardView as cDNA map |
View as Table
Internal |
Ensembl
carnation [Source:FlyBase gene name;Acc:FBgn0000257]
FBgn0000257FBtr0074728car123 XForwardView as cDNA map |
View as Table
Internal |
Ensembl
carnation [Source:FlyBase gene name;Acc:FBgn0000257]
FBgn0000316FBtr0070064cin223 XForwardView as cDNA map |
View as Table
Internal |
Ensembl
cinnamon [Source:FlyBase gene name;Acc:FBgn0000316]
FBgn0000316FBtr0070065cin223 XForwardView as cDNA map |
View as Table
Internal |
Ensembl
cinnamon [Source:FlyBase gene name;Acc:FBgn0000316]
FBgn0000346FBtr0073754comt123 XForwardView as cDNA map |
View as Table
Internal |
Ensembl
comatose [Source:FlyBase gene name;Acc:FBgn0000346]
FBgn0000382FBtr0070378csw123 XForwardView as cDNA map |
View as Table
Internal |
Ensembl
corkscrew [Source:FlyBase gene name;Acc:FBgn0000382]
FBgn0000382FBtr0070379csw123 XForwardView as cDNA map |
View as Table
Internal |
Ensembl
corkscrew [Source:FlyBase gene name;Acc:FBgn0000382]
FBgn0000382FBtr0070380csw123 XForwardView as cDNA map |
View as Table
Internal |
Ensembl
corkscrew [Source:FlyBase gene name;Acc:FBgn0000382]
FBgn0000709FBtr0077192fliI223 XForwardView as cDNA map |
View as Table
Internal |
Ensembl
flightless I [Source:FlyBase gene name;Acc:FBgn0000709]
FBgn0000826FBtr0070234png123 XReverseView as cDNA map |
View as Table
Internal |
Ensembl
pan gu [Source:FlyBase gene name;Acc:FBgn0000826]
FBgn0001090FBtr0074656bnb123 XReverseView as cDNA map |
View as Table
Internal |
Ensembl
bangles and beads [Source:FlyBase gene name;Acc:FBgn0001090]
FBgn0001186FBtr0071361Hex-A223 XForwardView as cDNA map |
View as Table
Internal |
Ensembl
Hexokinase A [Source:FlyBase gene name;Acc:FBgn0001186]
FBgn0001186FBtr0071362Hex-A223 XForwardView as cDNA map |
View as Table
Internal |
Ensembl
Hexokinase A [Source:FlyBase gene name;Acc:FBgn0001186]
FBgn0001250FBtr0074357if123 XReverseView as cDNA map |
View as Table
Internal |
Ensembl
inflated [Source:FlyBase gene name;Acc:FBgn0001250]
FBgn0001250FBtr0301352if123 XReverseView as cDNA map |
View as Table
Internal |
Ensembl
inflated [Source:FlyBase gene name;Acc:FBgn0001250]
FBgn0001250FBtr0301353if123 XReverseView as cDNA map |
View as Table
Internal |
Ensembl
inflated [Source:FlyBase gene name;Acc:FBgn0001250]
FBgn0001250FBtr0301354if123 XReverseView as cDNA map |
View as Table
Internal |
Ensembl
inflated [Source:FlyBase gene name;Acc:FBgn0001250]
FBgn0001341FBtr0070119l(1)1Bi123 XForwardView as cDNA map |
View as Table
Internal |
Ensembl
lethal (1) 1Bi [Source:FlyBase gene name;Acc:FBgn0001341]
FBgn0001612FBtr0073841l(1)dd4123 XReverseView as cDNA map |
View as Table
Internal |
Ensembl
lethal (1) discs degenerate 4 [Source:FlyBase gene name;Acc:FBgn0001612]
FBgn0002709FBtr0299823mei-218123 XReverseView as cDNA map |
View as Table
Internal |
Ensembl
meiotic 218 [Source:FlyBase gene name;Acc:FBgn0002709]
FBgn0002917FBtr0112815na123 XForwardView as cDNA map |
View as Table
Internal |
Ensembl
narrow abdomen [Source:FlyBase gene name;Acc:FBgn0002917]
FBgn0002917FBtr0303764na123 XForwardView as cDNA map |
View as Table
Internal |
Ensembl
narrow abdomen [Source:FlyBase gene name;Acc:FBgn0002917]
FBgn0003023FBtr0071236otu223 XReverseView as cDNA map |
View as Table
Internal |
Ensembl
ovarian tumor [Source:FlyBase gene name;Acc:FBgn0003023]
FBgn0003023FBtr0071237otu223 XReverseView as cDNA map |
View as Table
Internal |
Ensembl
ovarian tumor [Source:FlyBase gene name;Acc:FBgn0003023]
FBgn0003023FBtr0071238otu223 XReverseView as cDNA map |
View as Table
Internal |
Ensembl
ovarian tumor [Source:FlyBase gene name;Acc:FBgn0003023]
FBgn0003048FBtr0070395pcx123 XForwardView as cDNA map |
View as Table
Internal |
Ensembl
pecanex [Source:FlyBase gene name;Acc:FBgn0003048]
FBgn0003086FBtr0070537Pig1123 XReverseView as cDNA map |
View as Table
Internal |
Ensembl
Pre-intermoult gene 1 [Source:FlyBase gene name;Acc:FBgn0003086]
FBgn0003116FBtr0070389pn123 XForwardView as cDNA map |
View as Table
Internal |
Ensembl
prune [Source:FlyBase gene name;Acc:FBgn0003116]
FBgn0003204FBtr0071494ras123 XForwardView as cDNA map |
View as Table
Internal |
Ensembl
raspberry [Source:FlyBase gene name;Acc:FBgn0003204]
FBgn0003204FBtr0071495ras123 XForwardView as cDNA map |
View as Table
Internal |
Ensembl
raspberry [Source:FlyBase gene name;Acc:FBgn0003204]
FBgn0003218FBtr0301532rdgB123 XForwardView as cDNA map |
View as Table
Internal |
Ensembl
retinal degeneration B [Source:FlyBase gene name;Acc:FBgn0003218]
FBgn0003321FBtr0073411sbr123 XReverseView as cDNA map |
View as Table
Internal |
Ensembl
small bristles [Source:FlyBase gene name;Acc:FBgn0003321]
FBgn0003360FBtr0073421sesB123 XReverseView as cDNA map |
View as Table
Internal |
Ensembl
stress-sensitive B [Source:FlyBase gene name;Acc:FBgn0003360]
FBgn0003360FBtr0073422sesB123 XReverseView as cDNA map |
View as Table
Internal |
Ensembl
stress-sensitive B [Source:FlyBase gene name;Acc:FBgn0003360]
FBgn0003360FBtr0073423sesB123 XReverseView as cDNA map |
View as Table
Internal |
Ensembl
stress-sensitive B [Source:FlyBase gene name;Acc:FBgn0003360]
FBgn0003360FBtr0073424sesB123 XReverseView as cDNA map |
View as Table
Internal |
Ensembl
stress-sensitive B [Source:FlyBase gene name;Acc:FBgn0003360]
FBgn0003380FBtr0089657Sh123 XReverseView as cDNA map |
View as Table
Internal |
Ensembl
Shaker [Source:FlyBase gene name;Acc:FBgn0003380]
FBgn0003380FBtr0089658Sh123 XReverseView as cDNA map |
View as Table
Internal |
Ensembl
Shaker [Source:FlyBase gene name;Acc:FBgn0003380]
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GUI created by the Computational Medicine Center at the Sidney Kimmel Medical College of Thomas Jefferson University
We gratefully acknowledge support of this work by the William M. Keck Foundation