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Genome: Drosophila Melanogaster | mRNA | miRBase 18 (Nov. 2011), ENSEMBL 65 (Dec. 2011) and RNA22v1.0
Description: List of transcripts that are targeted by all of the below miRNA identifiers simultaneously
miRNA's: dme-miR-4940-3p (MIMAT0020147)
Filtering By: Base pair min value: 12 | Folding energy max value (Kcal/mol): -21 | Min miRNA targets: 1


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Gene IDTranscript IDCommon Gene Name# of miRNA targets
for specified miRNAs
ChromosomeStrand DirectionTranscript Link to view miRNA target predictionsGene LinkDescription
FBgn0002521FBtr0089204pho14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
pleiohomeotic [Source:FlyBase gene name;Acc:FBgn0002521]
FBgn0002521FBtr0089205pho14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
pleiohomeotic [Source:FlyBase gene name;Acc:FBgn0002521]
FBgn0004607FBtr0089070zfh224ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Zn finger homeodomain 2 [Source:FlyBase gene name;Acc:FBgn0004607]
FBgn0004607FBtr0307167zfh224ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Zn finger homeodomain 2 [Source:FlyBase gene name;Acc:FBgn0004607]
FBgn0004859FBtr0089178ci44ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cubitus interruptus [Source:FlyBase gene name;Acc:FBgn0004859]
FBgn0004859FBtr0306168ci34ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cubitus interruptus [Source:FlyBase gene name;Acc:FBgn0004859]
FBgn0004859FBtr0308074ci44ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cubitus interruptus [Source:FlyBase gene name;Acc:FBgn0004859]
FBgn0005558FBtr0089235ey14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
eyeless [Source:FlyBase gene name;Acc:FBgn0005558]
FBgn0005558FBtr0089236ey14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
eyeless [Source:FlyBase gene name;Acc:FBgn0005558]
FBgn0005558FBtr0100395ey14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
eyeless [Source:FlyBase gene name;Acc:FBgn0005558]
FBgn0005558FBtr0100396ey14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
eyeless [Source:FlyBase gene name;Acc:FBgn0005558]
FBgn0005666FBtr0089793bt54ForwardView as cDNA map |
View as Table
Internal |
Ensembl
bent [Source:FlyBase gene name;Acc:FBgn0005666]
FBgn0005666FBtr0301340bt54ForwardView as cDNA map |
View as Table
Internal |
Ensembl
bent [Source:FlyBase gene name;Acc:FBgn0005666]
FBgn0005666FBtr0301341bt54ForwardView as cDNA map |
View as Table
Internal |
Ensembl
bent [Source:FlyBase gene name;Acc:FBgn0005666]
FBgn0011642FBtr0089210Zyx102EF14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Zyx102EF [Source:FlyBase gene name;Acc:FBgn0011642]
FBgn0011747FBtr0089171Ank44ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ankyrin [Source:FlyBase gene name;Acc:FBgn0011747]
FBgn0011747FBtr0089172Ank44ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ankyrin [Source:FlyBase gene name;Acc:FBgn0011747]
FBgn0011747FBtr0089173Ank44ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ankyrin [Source:FlyBase gene name;Acc:FBgn0011747]
FBgn0011747FBtr0089174Ank44ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ankyrin [Source:FlyBase gene name;Acc:FBgn0011747]
FBgn0011747FBtr0300497Ank44ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ankyrin [Source:FlyBase gene name;Acc:FBgn0011747]
FBgn0011747FBtr0300498Ank44ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ankyrin [Source:FlyBase gene name;Acc:FBgn0011747]
FBgn0016126FBtr0089065CaMKI14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Calcium/calmodulin-dependent protein kinase I [Source:FlyBase gene name;Acc:FBgn0016126]
FBgn0016126FBtr0089067CaMKI14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Calcium/calmodulin-dependent protein kinase I [Source:FlyBase gene name;Acc:FBgn0016126]
FBgn0016126FBtr0089069CaMKI14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Calcium/calmodulin-dependent protein kinase I [Source:FlyBase gene name;Acc:FBgn0016126]
FBgn0017545FBtr0089175RpS3A14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ribosomal protein S3A [Source:FlyBase gene name;Acc:FBgn0017545]
FBgn0017545FBtr0089176RpS3A14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ribosomal protein S3A [Source:FlyBase gene name;Acc:FBgn0017545]
FBgn0017545FBtr0089177RpS3A14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ribosomal protein S3A [Source:FlyBase gene name;Acc:FBgn0017545]
FBgn0017545FBtr0308295RpS3A14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ribosomal protein S3A [Source:FlyBase gene name;Acc:FBgn0017545]
FBgn0017545FBtr0308296RpS3A14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ribosomal protein S3A [Source:FlyBase gene name;Acc:FBgn0017545]
FBgn0023213FBtr0089243eIF4G14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
eukaryotic translation initiation factor 4G [Source:FlyBase gene name;Acc:FBgn0023213]
FBgn0023213FBtr0112904eIF4G14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
eukaryotic translation initiation factor 4G [Source:FlyBase gene name;Acc:FBgn0023213]
FBgn0023213FBtr0289951eIF4G14ReverseView as cDNA map |
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Internal |
Ensembl
eukaryotic translation initiation factor 4G [Source:FlyBase gene name;Acc:FBgn0023213]
FBgn0024728FBtr0089090Slip114ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Slip1 [Source:FlyBase gene name;Acc:FBgn0024728]
FBgn0025726FBtr0089247unc-1314ReverseView as cDNA map |
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Internal |
Ensembl
unc-13 [Source:FlyBase gene name;Acc:FBgn0025726]
FBgn0025740FBtr0089179plexB14ReverseView as cDNA map |
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Internal |
Ensembl
plexin B [Source:FlyBase gene name;Acc:FBgn0025740]
FBgn0025740FBtr0308297plexB14ReverseView as cDNA map |
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Internal |
Ensembl
plexin B [Source:FlyBase gene name;Acc:FBgn0025740]
FBgn0025741FBtr0089223plexA24ReverseView as cDNA map |
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Internal |
Ensembl
plexin A [Source:FlyBase gene name;Acc:FBgn0025741]
FBgn0025741FBtr0089224plexA14ReverseView as cDNA map |
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Internal |
Ensembl
plexin A [Source:FlyBase gene name;Acc:FBgn0025741]
FBgn0025741FBtr0089225plexA14ReverseView as cDNA map |
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Internal |
Ensembl
plexin A [Source:FlyBase gene name;Acc:FBgn0025741]
FBgn0025741FBtr0089226plexA24ReverseView as cDNA map |
View as Table
Internal |
Ensembl
plexin A [Source:FlyBase gene name;Acc:FBgn0025741]
FBgn0025741FBtr0100296plexA14ReverseView as cDNA map |
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Internal |
Ensembl
plexin A [Source:FlyBase gene name;Acc:FBgn0025741]
FBgn0025936FBtr0089082Eph24ForwardView as cDNA map |
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Internal |
Ensembl
Eph receptor tyrosine kinase [Source:FlyBase gene name;Acc:FBgn0025936]
FBgn0025936FBtr0089083Eph24ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Eph receptor tyrosine kinase [Source:FlyBase gene name;Acc:FBgn0025936]
FBgn0025936FBtr0089084Eph24ForwardView as cDNA map |
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Internal |
Ensembl
Eph receptor tyrosine kinase [Source:FlyBase gene name;Acc:FBgn0025936]
FBgn0025936FBtr0089085Eph24ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Eph receptor tyrosine kinase [Source:FlyBase gene name;Acc:FBgn0025936]
FBgn0025936FBtr0089086Eph24ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Eph receptor tyrosine kinase [Source:FlyBase gene name;Acc:FBgn0025936]
FBgn0025936FBtr0301285Eph24ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Eph receptor tyrosine kinase [Source:FlyBase gene name;Acc:FBgn0025936]
FBgn0026262FBtr0089110bip214ReverseView as cDNA map |
View as Table
Internal |
Ensembl
bip2 [Source:FlyBase gene name;Acc:FBgn0026262]
FBgn0028996FBtr0089104onecut14ReverseView as cDNA map |
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Internal |
Ensembl
onecut [Source:FlyBase gene name;Acc:FBgn0028996]
FBgn0039890FBtr0089146CG231624ReverseView as cDNA map |
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Internal |
Ensembl
FBgn0039890FBtr0089147CG231624ReverseView as cDNA map |
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Ensembl
FBgn0039890FBtr0089148CG231624ReverseView as cDNA map |
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Ensembl
FBgn0039890FBtr0089149CG231624ReverseView as cDNA map |
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Ensembl
FBgn0039890FBtr0089150CG231624ReverseView as cDNA map |
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Ensembl
FBgn0039890FBtr0089151CG231624ReverseView as cDNA map |
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Ensembl
FBgn0039890FBtr0089152CG231624ReverseView as cDNA map |
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Ensembl
FBgn0039890FBtr0308247CG231624ReverseView as cDNA map |
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Internal |
Ensembl
FBgn0039897FBtr0089116CG167414ForwardView as cDNA map |
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Internal |
Ensembl
FBgn0039897FBtr0089119CG167414ForwardView as cDNA map |
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Internal |
Ensembl
FBgn0039897FBtr0300796CG167414ForwardView as cDNA map |
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Ensembl
FBgn0039897FBtr0300797CG167414ForwardView as cDNA map |
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Internal |
Ensembl
FBgn0039897FBtr0300798CG167414ForwardView as cDNA map |
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Ensembl
FBgn0039897FBtr0300799CG167414ForwardView as cDNA map |
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Ensembl
FBgn0039897FBtr0300800CG167414ForwardView as cDNA map |
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Internal |
Ensembl
FBgn0039897FBtr0308086CG167414ForwardView as cDNA map |
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Internal |
Ensembl
FBgn0039897FBtr0308087CG167414ForwardView as cDNA map |
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Internal |
Ensembl
FBgn0039902FBtr0089132CG217734ReverseView as cDNA map |
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Ensembl
FBgn0039902FBtr0089133CG217734ReverseView as cDNA map |
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Ensembl
FBgn0039902FBtr0114519CG217734ReverseView as cDNA map |
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Ensembl
FBgn0039904FBtr0089124Hcf34ForwardView as cDNA map |
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Internal |
Ensembl
Host cell factor [Source:FlyBase gene name;Acc:FBgn0039904]
FBgn0039904FBtr0089125Hcf34ForwardView as cDNA map |
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Internal |
Ensembl
Host cell factor [Source:FlyBase gene name;Acc:FBgn0039904]
FBgn0039904FBtr0089126Hcf34ForwardView as cDNA map |
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Internal |
Ensembl
Host cell factor [Source:FlyBase gene name;Acc:FBgn0039904]
FBgn0039904FBtr0089127Hcf44ForwardView as cDNA map |
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Internal |
Ensembl
Host cell factor [Source:FlyBase gene name;Acc:FBgn0039904]
FBgn0039904FBtr0307379Hcf24ForwardView as cDNA map |
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Internal |
Ensembl
Host cell factor [Source:FlyBase gene name;Acc:FBgn0039904]
FBgn0039907FBtr0089111lgs14ReverseView as cDNA map |
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Internal |
Ensembl
legless [Source:FlyBase gene name;Acc:FBgn0039907]
FBgn0039909FBtr0089105CG197014ReverseView as cDNA map |
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Internal |
Ensembl
FBgn0039911FBtr0089079CG190914ForwardView as cDNA map |
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Internal |
Ensembl
FBgn0039911FBtr0089080CG190914ForwardView as cDNA map |
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Internal |
Ensembl
FBgn0039915FBtr0089971CG173214ForwardView as cDNA map |
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Internal |
Ensembl
FBgn0039915FBtr0089972CG173214ForwardView as cDNA map |
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Internal |
Ensembl
FBgn0039923FBtr0089253MED2614ReverseView as cDNA map |
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Internal |
Ensembl
Mediator complex subunit 26 [Source:FlyBase gene name;Acc:FBgn0039923]
FBgn0039925FBtr0089196Kif3C34ForwardView as cDNA map |
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Internal |
Ensembl
Kif3C [Source:FlyBase gene name;Acc:FBgn0039925]
FBgn0039927FBtr0089195CG1115514ForwardView as cDNA map |
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Internal |
Ensembl
FBgn0039937FBtr0089251fd102C14ReverseView as cDNA map |
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Internal |
Ensembl
forkhead domain 102C [Source:FlyBase gene name;Acc:FBgn0039937]
FBgn0039938FBtr0100600Sox102F14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Sox102F [Source:FlyBase gene name;Acc:FBgn0039938]
FBgn0040324FBtr0089075Ephrin24ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Ephrin [Source:FlyBase gene name;Acc:FBgn0040324]
FBgn0040324FBtr0089076Ephrin24ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Ephrin [Source:FlyBase gene name;Acc:FBgn0040324]
FBgn0040324FBtr0089077Ephrin24ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Ephrin [Source:FlyBase gene name;Acc:FBgn0040324]
FBgn0040324FBtr0089078Ephrin24ForwardView as cDNA map |
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Internal |
Ensembl
Ephrin [Source:FlyBase gene name;Acc:FBgn0040324]
FBgn0042696FBtr0089141NfI24ReverseView as cDNA map |
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Internal |
Ensembl
Nuclear factor I [Source:FlyBase gene name;Acc:FBgn0042696]
FBgn0051992FBtr0089096gw14ReverseView as cDNA map |
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Ensembl
gawky [Source:FlyBase gene name;Acc:FBgn0051992]
FBgn0051992FBtr0089097gw14ReverseView as cDNA map |
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Internal |
Ensembl
gawky [Source:FlyBase gene name;Acc:FBgn0051992]
FBgn0051992FBtr0089098gw14ReverseView as cDNA map |
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Internal |
Ensembl
gawky [Source:FlyBase gene name;Acc:FBgn0051992]
FBgn0051992FBtr0089099gw14ReverseView as cDNA map |
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Internal |
Ensembl
gawky [Source:FlyBase gene name;Acc:FBgn0051992]
FBgn0051992FBtr0089100gw14ReverseView as cDNA map |
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Internal |
Ensembl
gawky [Source:FlyBase gene name;Acc:FBgn0051992]
FBgn0051992FBtr0089101gw14ReverseView as cDNA map |
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Internal |
Ensembl
gawky [Source:FlyBase gene name;Acc:FBgn0051992]
FBgn0051992FBtr0100165gw14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
gawky [Source:FlyBase gene name;Acc:FBgn0051992]
FBgn0051992FBtr0100166gw14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
gawky [Source:FlyBase gene name;Acc:FBgn0051992]
FBgn0051998FBtr0089145CG3199814ReverseView as cDNA map |
View as Table
Internal |
Ensembl
FBgn0051998FBtr0308249CG3199814ReverseView as cDNA map |
View as Table
Internal |
Ensembl
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GUI created by the Computational Medicine Center at the Sidney Kimmel Medical College of Thomas Jefferson University
We gratefully acknowledge support of this work by the William M. Keck Foundation