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Genome: Drosophila Melanogaster | mRNA | miRBase 18 (Nov. 2011), ENSEMBL 65 (Dec. 2011) and RNA22v1.0
Description: List of transcripts that are targeted by all of the below miRNA identifiers simultaneously
miRNA's: dme-miR-9c-3p (MIMAT0020828)
Filtering By: Base pair min value: 12 | Folding energy max value (Kcal/mol): -21 | Min miRNA targets: 1


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Gene IDTranscript IDCommon Gene Name# of miRNA targets
for specified miRNAs
ChromosomeStrand DirectionTranscript Link to view miRNA target predictionsGene LinkDescription
FBgn0002521FBtr0089204pho24ReverseView as cDNA map |
View as Table
Internal |
Ensembl
pleiohomeotic [Source:FlyBase gene name;Acc:FBgn0002521]
FBgn0002521FBtr0089205pho14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
pleiohomeotic [Source:FlyBase gene name;Acc:FBgn0002521]
FBgn0004607FBtr0089070zfh224ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Zn finger homeodomain 2 [Source:FlyBase gene name;Acc:FBgn0004607]
FBgn0004607FBtr0307167zfh224ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Zn finger homeodomain 2 [Source:FlyBase gene name;Acc:FBgn0004607]
FBgn0005561FBtr0089327sv24ForwardView as cDNA map |
View as Table
Internal |
Ensembl
shaven [Source:FlyBase gene name;Acc:FBgn0005561]
FBgn0005561FBtr0089328sv24ForwardView as cDNA map |
View as Table
Internal |
Ensembl
shaven [Source:FlyBase gene name;Acc:FBgn0005561]
FBgn0005561FBtr0100342sv24ForwardView as cDNA map |
View as Table
Internal |
Ensembl
shaven [Source:FlyBase gene name;Acc:FBgn0005561]
FBgn0005561FBtr0100343sv24ForwardView as cDNA map |
View as Table
Internal |
Ensembl
shaven [Source:FlyBase gene name;Acc:FBgn0005561]
FBgn0005561FBtr0100344sv14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
shaven [Source:FlyBase gene name;Acc:FBgn0005561]
FBgn0005561FBtr0100345sv14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
shaven [Source:FlyBase gene name;Acc:FBgn0005561]
FBgn0005561FBtr0100346sv24ForwardView as cDNA map |
View as Table
Internal |
Ensembl
shaven [Source:FlyBase gene name;Acc:FBgn0005561]
FBgn0005561FBtr0301563sv24ForwardView as cDNA map |
View as Table
Internal |
Ensembl
shaven [Source:FlyBase gene name;Acc:FBgn0005561]
FBgn0005666FBtr0089793bt14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
bent [Source:FlyBase gene name;Acc:FBgn0005666]
FBgn0005666FBtr0301340bt14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
bent [Source:FlyBase gene name;Acc:FBgn0005666]
FBgn0005666FBtr0301341bt14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
bent [Source:FlyBase gene name;Acc:FBgn0005666]
FBgn0011642FBtr0089210Zyx102EF14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Zyx102EF [Source:FlyBase gene name;Acc:FBgn0011642]
FBgn0011642FBtr0089211Zyx102EF14ReverseView as cDNA map |
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Internal |
Ensembl
Zyx102EF [Source:FlyBase gene name;Acc:FBgn0011642]
FBgn0011642FBtr0089212Zyx102EF14ReverseView as cDNA map |
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Internal |
Ensembl
Zyx102EF [Source:FlyBase gene name;Acc:FBgn0011642]
FBgn0011642FBtr0089213Zyx102EF14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Zyx102EF [Source:FlyBase gene name;Acc:FBgn0011642]
FBgn0011642FBtr0089214Zyx102EF14ReverseView as cDNA map |
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Internal |
Ensembl
Zyx102EF [Source:FlyBase gene name;Acc:FBgn0011642]
FBgn0011642FBtr0089215Zyx102EF14ReverseView as cDNA map |
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Internal |
Ensembl
Zyx102EF [Source:FlyBase gene name;Acc:FBgn0011642]
FBgn0011642FBtr0089216Zyx102EF14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Zyx102EF [Source:FlyBase gene name;Acc:FBgn0011642]
FBgn0011747FBtr0089171Ank24ReverseView as cDNA map |
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Internal |
Ensembl
Ankyrin [Source:FlyBase gene name;Acc:FBgn0011747]
FBgn0011747FBtr0089172Ank24ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ankyrin [Source:FlyBase gene name;Acc:FBgn0011747]
FBgn0011747FBtr0089173Ank24ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ankyrin [Source:FlyBase gene name;Acc:FBgn0011747]
FBgn0011747FBtr0089174Ank24ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ankyrin [Source:FlyBase gene name;Acc:FBgn0011747]
FBgn0011747FBtr0300497Ank24ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ankyrin [Source:FlyBase gene name;Acc:FBgn0011747]
FBgn0011747FBtr0300498Ank24ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ankyrin [Source:FlyBase gene name;Acc:FBgn0011747]
FBgn0023213FBtr0089243eIF4G14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
eukaryotic translation initiation factor 4G [Source:FlyBase gene name;Acc:FBgn0023213]
FBgn0023213FBtr0112904eIF4G14ReverseView as cDNA map |
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Internal |
Ensembl
eukaryotic translation initiation factor 4G [Source:FlyBase gene name;Acc:FBgn0023213]
FBgn0023213FBtr0289951eIF4G14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
eukaryotic translation initiation factor 4G [Source:FlyBase gene name;Acc:FBgn0023213]
FBgn0024913FBtr0089209Actbeta14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Activin-beta [Source:FlyBase gene name;Acc:FBgn0024913]
FBgn0025741FBtr0089223plexA24ReverseView as cDNA map |
View as Table
Internal |
Ensembl
plexin A [Source:FlyBase gene name;Acc:FBgn0025741]
FBgn0025741FBtr0089224plexA24ReverseView as cDNA map |
View as Table
Internal |
Ensembl
plexin A [Source:FlyBase gene name;Acc:FBgn0025741]
FBgn0025741FBtr0089225plexA24ReverseView as cDNA map |
View as Table
Internal |
Ensembl
plexin A [Source:FlyBase gene name;Acc:FBgn0025741]
FBgn0025741FBtr0089226plexA24ReverseView as cDNA map |
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Internal |
Ensembl
plexin A [Source:FlyBase gene name;Acc:FBgn0025741]
FBgn0025741FBtr0100296plexA14ReverseView as cDNA map |
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Internal |
Ensembl
plexin A [Source:FlyBase gene name;Acc:FBgn0025741]
FBgn0026199FBtr0089094myoglianin14ReverseView as cDNA map |
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Internal |
Ensembl
myoglianin [Source:FlyBase gene name;Acc:FBgn0026199]
FBgn0028996FBtr0089104onecut14ReverseView as cDNA map |
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Internal |
Ensembl
onecut [Source:FlyBase gene name;Acc:FBgn0028996]
FBgn0039890FBtr0089146CG231614ReverseView as cDNA map |
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Ensembl
FBgn0039890FBtr0089147CG231614ReverseView as cDNA map |
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Ensembl
FBgn0039890FBtr0089148CG231614ReverseView as cDNA map |
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Ensembl
FBgn0039890FBtr0089149CG231614ReverseView as cDNA map |
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Ensembl
FBgn0039890FBtr0089150CG231614ReverseView as cDNA map |
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Ensembl
FBgn0039890FBtr0089151CG231614ReverseView as cDNA map |
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Ensembl
FBgn0039890FBtr0089152CG231614ReverseView as cDNA map |
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Ensembl
FBgn0039890FBtr0308247CG231614ReverseView as cDNA map |
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Ensembl
FBgn0039897FBtr0308087CG167414ForwardView as cDNA map |
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Internal |
Ensembl
FBgn0039900FBtr0089134Syt714ReverseView as cDNA map |
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Internal |
Ensembl
Syt7 [Source:FlyBase gene name;Acc:FBgn0039900]
FBgn0039900FBtr0089137Syt714ReverseView as cDNA map |
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Internal |
Ensembl
Syt7 [Source:FlyBase gene name;Acc:FBgn0039900]
FBgn0039900FBtr0089138Syt714ReverseView as cDNA map |
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Internal |
Ensembl
Syt7 [Source:FlyBase gene name;Acc:FBgn0039900]
FBgn0039900FBtr0089139Syt714ReverseView as cDNA map |
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Internal |
Ensembl
Syt7 [Source:FlyBase gene name;Acc:FBgn0039900]
FBgn0039900FBtr0100397Syt714ReverseView as cDNA map |
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Internal |
Ensembl
Syt7 [Source:FlyBase gene name;Acc:FBgn0039900]
FBgn0039900FBtr0114475Syt714ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Syt7 [Source:FlyBase gene name;Acc:FBgn0039900]
FBgn0039900FBtr0305658Syt714ReverseView as cDNA map |
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Internal |
Ensembl
Syt7 [Source:FlyBase gene name;Acc:FBgn0039900]
FBgn0039900FBtr0305659Syt714ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Syt7 [Source:FlyBase gene name;Acc:FBgn0039900]
FBgn0039900FBtr0305660Syt714ReverseView as cDNA map |
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Internal |
Ensembl
Syt7 [Source:FlyBase gene name;Acc:FBgn0039900]
FBgn0039902FBtr0089132CG217714ReverseView as cDNA map |
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Ensembl
FBgn0039902FBtr0089133CG217714ReverseView as cDNA map |
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Ensembl
FBgn0039902FBtr0114519CG217714ReverseView as cDNA map |
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Internal |
Ensembl
FBgn0039904FBtr0089124Hcf24ForwardView as cDNA map |
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Internal |
Ensembl
Host cell factor [Source:FlyBase gene name;Acc:FBgn0039904]
FBgn0039904FBtr0089125Hcf24ForwardView as cDNA map |
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Internal |
Ensembl
Host cell factor [Source:FlyBase gene name;Acc:FBgn0039904]
FBgn0039904FBtr0089126Hcf24ForwardView as cDNA map |
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Internal |
Ensembl
Host cell factor [Source:FlyBase gene name;Acc:FBgn0039904]
FBgn0039904FBtr0089127Hcf24ForwardView as cDNA map |
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Internal |
Ensembl
Host cell factor [Source:FlyBase gene name;Acc:FBgn0039904]
FBgn0039904FBtr0307379Hcf24ForwardView as cDNA map |
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Internal |
Ensembl
Host cell factor [Source:FlyBase gene name;Acc:FBgn0039904]
FBgn0039911FBtr0089079CG190914ForwardView as cDNA map |
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Internal |
Ensembl
FBgn0039911FBtr0089080CG190914ForwardView as cDNA map |
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Internal |
Ensembl
FBgn0039914FBtr0089103mav14ReverseView as cDNA map |
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Ensembl
maverick [Source:FlyBase gene name;Acc:FBgn0039914]
FBgn0039914FBtr0100502mav14ReverseView as cDNA map |
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Ensembl
maverick [Source:FlyBase gene name;Acc:FBgn0039914]
FBgn0039915FBtr0089971CG173224ForwardView as cDNA map |
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Ensembl
FBgn0039915FBtr0089972CG173224ForwardView as cDNA map |
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Ensembl
FBgn0039920FBtr0089091CG1136014ForwardView as cDNA map |
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Ensembl
FBgn0039924FBtr0100543CG1747114ReverseView as cDNA map |
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Ensembl
FBgn0039924FBtr0100544CG1747114ReverseView as cDNA map |
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Internal |
Ensembl
FBgn0039925FBtr0089196Kif3C14ForwardView as cDNA map |
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Internal |
Ensembl
Kif3C [Source:FlyBase gene name;Acc:FBgn0039925]
FBgn0039927FBtr0089194CG1115514ForwardView as cDNA map |
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Internal |
Ensembl
FBgn0039936FBtr0300882CG1114814ReverseView as cDNA map |
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Internal |
Ensembl
FBgn0039936FBtr0300883CG1114814ReverseView as cDNA map |
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Internal |
Ensembl
FBgn0039936FBtr0300884CG1114814ReverseView as cDNA map |
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Ensembl
FBgn0039936FBtr0300885CG1114814ReverseView as cDNA map |
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Ensembl
FBgn0039936FBtr0300886CG1114814ReverseView as cDNA map |
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Ensembl
FBgn0051998FBtr0089145CG3199824ReverseView as cDNA map |
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Internal |
Ensembl
FBgn0051998FBtr0308249CG3199824ReverseView as cDNA map |
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Ensembl
FBgn0052000FBtr0089445CG3200014ForwardView as cDNA map |
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Internal |
Ensembl
FBgn0052000FBtr0089446CG3200014ForwardView as cDNA map |
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Ensembl
FBgn0052000FBtr0089447CG3200014ForwardView as cDNA map |
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Ensembl
FBgn0052000FBtr0089451CG3200014ForwardView as cDNA map |
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Ensembl
FBgn0052000FBtr0113417CG3200014ForwardView as cDNA map |
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Internal |
Ensembl
FBgn0085432FBtr0089160pan14ForwardView as cDNA map |
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Internal |
Ensembl
pangolin [Source:FlyBase gene name;Acc:FBgn0085432]
FBgn0085432FBtr0089162pan14ForwardView as cDNA map |
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Internal |
Ensembl
pangolin [Source:FlyBase gene name;Acc:FBgn0085432]
FBgn0085432FBtr0100246pan14ForwardView as cDNA map |
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Internal |
Ensembl
pangolin [Source:FlyBase gene name;Acc:FBgn0085432]
FBgn0087002FBtr0089188Rfabg44ForwardView as cDNA map |
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Internal |
Ensembl
Retinoid- and fatty acid-binding glycoprotein [Source:FlyBase gene name;Acc:FBgn0087002]
FBgn0259214FBtr0300554PMCA14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
plasma membrane calcium ATPase [Source:FlyBase gene name;Acc:FBgn0259214]
FBgn0259214FBtr0300555PMCA14ReverseView as cDNA map |
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Internal |
Ensembl
plasma membrane calcium ATPase [Source:FlyBase gene name;Acc:FBgn0259214]
FBgn0259214FBtr0300556PMCA14ReverseView as cDNA map |
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Internal |
Ensembl
plasma membrane calcium ATPase [Source:FlyBase gene name;Acc:FBgn0259214]
FBgn0259214FBtr0300557PMCA14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
plasma membrane calcium ATPase [Source:FlyBase gene name;Acc:FBgn0259214]
FBgn0259214FBtr0300558PMCA14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
plasma membrane calcium ATPase [Source:FlyBase gene name;Acc:FBgn0259214]
FBgn0259214FBtr0300559PMCA14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
plasma membrane calcium ATPase [Source:FlyBase gene name;Acc:FBgn0259214]
FBgn0259214FBtr0304046PMCA14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
plasma membrane calcium ATPase [Source:FlyBase gene name;Acc:FBgn0259214]
FBgn0259214FBtr0304047PMCA14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
plasma membrane calcium ATPase [Source:FlyBase gene name;Acc:FBgn0259214]
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GUI created by the Computational Medicine Center at the Sidney Kimmel Medical College of Thomas Jefferson University
We gratefully acknowledge support of this work by the William M. Keck Foundation