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Genome: Drosophila Melanogaster | mRNA | miRBase 18 (Nov. 2011), ENSEMBL 65 (Dec. 2011) and RNA22v1.0
Description: List of transcripts that are targeted by all of the below miRNA identifiers simultaneously
miRNA's: dme-miR-309-5p (MIMAT0020835)
Filtering By: Base pair min value: 12 | Folding energy max value (Kcal/mol): -21 | Min miRNA targets: 1


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Gene IDTranscript IDCommon Gene Name# of miRNA targets
for specified miRNAs
ChromosomeStrand DirectionTranscript Link to view miRNA target predictionsGene LinkDescription
FBgn0004607FBtr0089070zfh214ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Zn finger homeodomain 2 [Source:FlyBase gene name;Acc:FBgn0004607]
FBgn0004607FBtr0307167zfh214ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Zn finger homeodomain 2 [Source:FlyBase gene name;Acc:FBgn0004607]
FBgn0004859FBtr0089178ci14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cubitus interruptus [Source:FlyBase gene name;Acc:FBgn0004859]
FBgn0004859FBtr0306168ci14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cubitus interruptus [Source:FlyBase gene name;Acc:FBgn0004859]
FBgn0004859FBtr0308074ci14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cubitus interruptus [Source:FlyBase gene name;Acc:FBgn0004859]
FBgn0005558FBtr0089235ey14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
eyeless [Source:FlyBase gene name;Acc:FBgn0005558]
FBgn0005558FBtr0089236ey14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
eyeless [Source:FlyBase gene name;Acc:FBgn0005558]
FBgn0005558FBtr0100395ey14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
eyeless [Source:FlyBase gene name;Acc:FBgn0005558]
FBgn0005558FBtr0100396ey14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
eyeless [Source:FlyBase gene name;Acc:FBgn0005558]
FBgn0005561FBtr0089327sv14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
shaven [Source:FlyBase gene name;Acc:FBgn0005561]
FBgn0005561FBtr0089328sv14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
shaven [Source:FlyBase gene name;Acc:FBgn0005561]
FBgn0005561FBtr0100342sv14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
shaven [Source:FlyBase gene name;Acc:FBgn0005561]
FBgn0005561FBtr0100343sv14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
shaven [Source:FlyBase gene name;Acc:FBgn0005561]
FBgn0005561FBtr0100344sv14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
shaven [Source:FlyBase gene name;Acc:FBgn0005561]
FBgn0005561FBtr0100345sv14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
shaven [Source:FlyBase gene name;Acc:FBgn0005561]
FBgn0005561FBtr0100346sv14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
shaven [Source:FlyBase gene name;Acc:FBgn0005561]
FBgn0005666FBtr0089793bt44ForwardView as cDNA map |
View as Table
Internal |
Ensembl
bent [Source:FlyBase gene name;Acc:FBgn0005666]
FBgn0005666FBtr0301340bt44ForwardView as cDNA map |
View as Table
Internal |
Ensembl
bent [Source:FlyBase gene name;Acc:FBgn0005666]
FBgn0005666FBtr0301341bt44ForwardView as cDNA map |
View as Table
Internal |
Ensembl
bent [Source:FlyBase gene name;Acc:FBgn0005666]
FBgn0010217FBtr0089186ATPsyn-beta14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
ATP synthase-beta [Source:FlyBase gene name;Acc:FBgn0010217]
FBgn0011747FBtr0089171Ank14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ankyrin [Source:FlyBase gene name;Acc:FBgn0011747]
FBgn0011747FBtr0089172Ank14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ankyrin [Source:FlyBase gene name;Acc:FBgn0011747]
FBgn0011747FBtr0089173Ank14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ankyrin [Source:FlyBase gene name;Acc:FBgn0011747]
FBgn0011747FBtr0089174Ank14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ankyrin [Source:FlyBase gene name;Acc:FBgn0011747]
FBgn0011747FBtr0300497Ank14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ankyrin [Source:FlyBase gene name;Acc:FBgn0011747]
FBgn0011747FBtr0300498Ank14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ankyrin [Source:FlyBase gene name;Acc:FBgn0011747]
FBgn0017545FBtr0089175RpS3A14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ribosomal protein S3A [Source:FlyBase gene name;Acc:FBgn0017545]
FBgn0017545FBtr0089176RpS3A14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ribosomal protein S3A [Source:FlyBase gene name;Acc:FBgn0017545]
FBgn0017545FBtr0089177RpS3A14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ribosomal protein S3A [Source:FlyBase gene name;Acc:FBgn0017545]
FBgn0017545FBtr0308295RpS3A14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ribosomal protein S3A [Source:FlyBase gene name;Acc:FBgn0017545]
FBgn0017545FBtr0308296RpS3A14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ribosomal protein S3A [Source:FlyBase gene name;Acc:FBgn0017545]
FBgn0024728FBtr0089090Slip114ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Slip1 [Source:FlyBase gene name;Acc:FBgn0024728]
FBgn0024913FBtr0089209Actbeta14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Activin-beta [Source:FlyBase gene name;Acc:FBgn0024913]
FBgn0025726FBtr0089245unc-1334ReverseView as cDNA map |
View as Table
Internal |
Ensembl
unc-13 [Source:FlyBase gene name;Acc:FBgn0025726]
FBgn0025726FBtr0089246unc-1334ReverseView as cDNA map |
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Internal |
Ensembl
unc-13 [Source:FlyBase gene name;Acc:FBgn0025726]
FBgn0025726FBtr0089247unc-1334ReverseView as cDNA map |
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Internal |
Ensembl
unc-13 [Source:FlyBase gene name;Acc:FBgn0025726]
FBgn0025740FBtr0089179plexB24ReverseView as cDNA map |
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Internal |
Ensembl
plexin B [Source:FlyBase gene name;Acc:FBgn0025740]
FBgn0025740FBtr0308297plexB24ReverseView as cDNA map |
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Internal |
Ensembl
plexin B [Source:FlyBase gene name;Acc:FBgn0025740]
FBgn0026262FBtr0089110bip214ReverseView as cDNA map |
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Internal |
Ensembl
bip2 [Source:FlyBase gene name;Acc:FBgn0026262]
FBgn0026869FBtr0089106Thd134ReverseView as cDNA map |
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Internal |
Ensembl
Thd1 [Source:FlyBase gene name;Acc:FBgn0026869]
FBgn0039900FBtr0089134Syt714ReverseView as cDNA map |
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Internal |
Ensembl
Syt7 [Source:FlyBase gene name;Acc:FBgn0039900]
FBgn0039900FBtr0089137Syt714ReverseView as cDNA map |
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Internal |
Ensembl
Syt7 [Source:FlyBase gene name;Acc:FBgn0039900]
FBgn0039900FBtr0089138Syt714ReverseView as cDNA map |
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Internal |
Ensembl
Syt7 [Source:FlyBase gene name;Acc:FBgn0039900]
FBgn0039900FBtr0089139Syt714ReverseView as cDNA map |
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Internal |
Ensembl
Syt7 [Source:FlyBase gene name;Acc:FBgn0039900]
FBgn0039900FBtr0100397Syt714ReverseView as cDNA map |
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Internal |
Ensembl
Syt7 [Source:FlyBase gene name;Acc:FBgn0039900]
FBgn0039900FBtr0114475Syt714ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Syt7 [Source:FlyBase gene name;Acc:FBgn0039900]
FBgn0039900FBtr0305658Syt714ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Syt7 [Source:FlyBase gene name;Acc:FBgn0039900]
FBgn0039900FBtr0305659Syt714ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Syt7 [Source:FlyBase gene name;Acc:FBgn0039900]
FBgn0039900FBtr0305660Syt714ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Syt7 [Source:FlyBase gene name;Acc:FBgn0039900]
FBgn0039902FBtr0089132CG217724ReverseView as cDNA map |
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Internal |
Ensembl
FBgn0039902FBtr0089133CG217724ReverseView as cDNA map |
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Internal |
Ensembl
FBgn0039902FBtr0114519CG217724ReverseView as cDNA map |
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Internal |
Ensembl
FBgn0039904FBtr0089124Hcf14ForwardView as cDNA map |
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Internal |
Ensembl
Host cell factor [Source:FlyBase gene name;Acc:FBgn0039904]
FBgn0039904FBtr0089125Hcf14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Host cell factor [Source:FlyBase gene name;Acc:FBgn0039904]
FBgn0039904FBtr0089126Hcf24ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Host cell factor [Source:FlyBase gene name;Acc:FBgn0039904]
FBgn0039904FBtr0089127Hcf24ForwardView as cDNA map |
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Internal |
Ensembl
Host cell factor [Source:FlyBase gene name;Acc:FBgn0039904]
FBgn0039904FBtr0307379Hcf24ForwardView as cDNA map |
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Internal |
Ensembl
Host cell factor [Source:FlyBase gene name;Acc:FBgn0039904]
FBgn0039908FBtr0300343Asator14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Asator [Source:FlyBase gene name;Acc:FBgn0039908]
FBgn0039911FBtr0089079CG190914ForwardView as cDNA map |
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Internal |
Ensembl
FBgn0039915FBtr0089971CG173214ForwardView as cDNA map |
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Internal |
Ensembl
FBgn0039915FBtr0089972CG173214ForwardView as cDNA map |
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Internal |
Ensembl
FBgn0039925FBtr0089196Kif3C14ForwardView as cDNA map |
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Internal |
Ensembl
Kif3C [Source:FlyBase gene name;Acc:FBgn0039925]
FBgn0039936FBtr0300882CG1114824ReverseView as cDNA map |
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Internal |
Ensembl
FBgn0039936FBtr0300883CG1114824ReverseView as cDNA map |
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Internal |
Ensembl
FBgn0039936FBtr0300884CG1114824ReverseView as cDNA map |
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Ensembl
FBgn0039936FBtr0300885CG1114824ReverseView as cDNA map |
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Ensembl
FBgn0039936FBtr0300886CG1114824ReverseView as cDNA map |
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Internal |
Ensembl
FBgn0039937FBtr0089251fd102C24ReverseView as cDNA map |
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Internal |
Ensembl
forkhead domain 102C [Source:FlyBase gene name;Acc:FBgn0039937]
FBgn0040037FBtr0299529JYalpha14ForwardView as cDNA map |
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Internal |
Ensembl
JYalpha [Source:FlyBase gene name;Acc:FBgn0040037]
FBgn0040324FBtr0089075Ephrin14ForwardView as cDNA map |
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Internal |
Ensembl
Ephrin [Source:FlyBase gene name;Acc:FBgn0040324]
FBgn0040324FBtr0089076Ephrin14ForwardView as cDNA map |
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Internal |
Ensembl
Ephrin [Source:FlyBase gene name;Acc:FBgn0040324]
FBgn0040324FBtr0089077Ephrin14ForwardView as cDNA map |
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Internal |
Ensembl
Ephrin [Source:FlyBase gene name;Acc:FBgn0040324]
FBgn0040324FBtr0089078Ephrin14ForwardView as cDNA map |
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Internal |
Ensembl
Ephrin [Source:FlyBase gene name;Acc:FBgn0040324]
FBgn0051992FBtr0089096gw24ReverseView as cDNA map |
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Internal |
Ensembl
gawky [Source:FlyBase gene name;Acc:FBgn0051992]
FBgn0051992FBtr0089097gw14ReverseView as cDNA map |
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Internal |
Ensembl
gawky [Source:FlyBase gene name;Acc:FBgn0051992]
FBgn0051992FBtr0089098gw14ReverseView as cDNA map |
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Internal |
Ensembl
gawky [Source:FlyBase gene name;Acc:FBgn0051992]
FBgn0051992FBtr0089099gw14ReverseView as cDNA map |
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Internal |
Ensembl
gawky [Source:FlyBase gene name;Acc:FBgn0051992]
FBgn0051992FBtr0089100gw14ReverseView as cDNA map |
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Internal |
Ensembl
gawky [Source:FlyBase gene name;Acc:FBgn0051992]
FBgn0051992FBtr0089101gw14ReverseView as cDNA map |
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Internal |
Ensembl
gawky [Source:FlyBase gene name;Acc:FBgn0051992]
FBgn0051992FBtr0100165gw14ReverseView as cDNA map |
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Internal |
Ensembl
gawky [Source:FlyBase gene name;Acc:FBgn0051992]
FBgn0051992FBtr0100166gw14ReverseView as cDNA map |
View as Table
Internal |
Ensembl
gawky [Source:FlyBase gene name;Acc:FBgn0051992]
FBgn0051998FBtr0089145CG3199824ReverseView as cDNA map |
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Internal |
Ensembl
FBgn0051998FBtr0308249CG3199824ReverseView as cDNA map |
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Internal |
Ensembl
FBgn0052000FBtr0089445CG3200014ForwardView as cDNA map |
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Internal |
Ensembl
FBgn0052000FBtr0089446CG3200014ForwardView as cDNA map |
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Internal |
Ensembl
FBgn0052000FBtr0089447CG3200014ForwardView as cDNA map |
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Internal |
Ensembl
FBgn0052000FBtr0089448CG3200014ForwardView as cDNA map |
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Internal |
Ensembl
FBgn0052000FBtr0089449CG3200014ForwardView as cDNA map |
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Internal |
Ensembl
FBgn0052000FBtr0089450CG3200014ForwardView as cDNA map |
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Internal |
Ensembl
FBgn0052000FBtr0089451CG3200014ForwardView as cDNA map |
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Internal |
Ensembl
FBgn0052000FBtr0113417CG3200014ForwardView as cDNA map |
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Internal |
Ensembl
FBgn0052006FBtr0089170CG3200614ForwardView as cDNA map |
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Internal |
Ensembl
FBgn0052016FBtr0089229CG3201614ReverseView as cDNA map |
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Internal |
Ensembl
FBgn0052016FBtr0089230CG3201614ReverseView as cDNA map |
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Internal |
Ensembl
FBgn0052016FBtr0089231CG3201614ReverseView as cDNA map |
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Ensembl
FBgn0052016FBtr0089232CG3201614ReverseView as cDNA map |
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Internal |
Ensembl
FBgn0052016FBtr0089233CG3201614ReverseView as cDNA map |
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Internal |
Ensembl
FBgn0052016FBtr0089234CG3201614ReverseView as cDNA map |
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Internal |
Ensembl
FBgn0085432FBtr0089156pan14ForwardView as cDNA map |
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Internal |
Ensembl
pangolin [Source:FlyBase gene name;Acc:FBgn0085432]
FBgn0085432FBtr0089157pan14ForwardView as cDNA map |
View as Table
Internal |
Ensembl
pangolin [Source:FlyBase gene name;Acc:FBgn0085432]
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GUI created by the Computational Medicine Center at the Sidney Kimmel Medical College of Thomas Jefferson University
We gratefully acknowledge support of this work by the William M. Keck Foundation