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Genome: Mus Musculus | mRNA | miRBase 18 (Nov. 2011), ENSEMBL 65 (Dec. 2011) and RNA22v2.0
Description: List of transcripts that are targeted by all of the below miRNA identifiers simultaneously
miRNA's: mmu-miR-137-3p (MIMAT0000149)
Filtering By: Base pair min value: 12 | Folding energy max value (Kcal/mol): -12 | Min miRNA targets: 1 | Max p-value: .1


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Gene IDTranscript IDCommon Gene Name# of miRNA targets
for specified miRNAs
ChromosomeStrand DirectionTranscript Link to view miRNA target predictionsGene LinkDescription
ENSMUSG00000001305ENSMUST00000001339Rrp1511ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ribosomal RNA processing 15 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1914473]
ENSMUSG00000015314ENSMUST00000171330Slamf611ForwardView as cDNA map |
View as Table
Internal |
Ensembl
SLAM family member 6 [Source:MGI Symbol;Acc:MGI:1353620]
ENSMUSG00000016179ENSMUST00000016323Camk1g11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
calcium/calmodulin-dependent protein kinase I gamma [Source:MGI Symbol;Acc:MGI:2388073]
ENSMUSG00000018199ENSMUST00000159879Trove211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
TROVE domain family, member 2 [Source:MGI Symbol;Acc:MGI:106652]
ENSMUSG00000026270ENSMUST00000117814Capn1011ForwardView as cDNA map |
View as Table
Internal |
Ensembl
calpain 10 [Source:MGI Symbol;Acc:MGI:1344392]
ENSMUSG00000026349ENSMUST00000027587Ccnt211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cyclin T2 [Source:MGI Symbol;Acc:MGI:1920199]
ENSMUSG00000026395ENSMUST00000027645Ptprc11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
protein tyrosine phosphatase, receptor type, C [Source:MGI Symbol;Acc:MGI:97810]
ENSMUSG00000026395ENSMUST00000081416Ptprc11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
protein tyrosine phosphatase, receptor type, C [Source:MGI Symbol;Acc:MGI:97810]
ENSMUSG00000026395ENSMUST00000112036Ptprc11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
protein tyrosine phosphatase, receptor type, C [Source:MGI Symbol;Acc:MGI:97810]
ENSMUSG00000026395ENSMUST00000112038Ptprc11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
protein tyrosine phosphatase, receptor type, C [Source:MGI Symbol;Acc:MGI:97810]
ENSMUSG00000026435ENSMUST00000027695Slc45a311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 45, member 3 [Source:MGI Symbol;Acc:MGI:1922082]
ENSMUSG00000026483ENSMUST00000148810Fam129a11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
family with sequence similarity 129, member A [Source:MGI Symbol;Acc:MGI:2137237]
ENSMUSG00000026491ENSMUST00000027768Ahctf111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
AT hook containing transcription factor 1 [Source:MGI Symbol;Acc:MGI:1915033]
ENSMUSG00000026491ENSMUST00000140489Ahctf111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
AT hook containing transcription factor 1 [Source:MGI Symbol;Acc:MGI:1915033]
ENSMUSG00000026576ENSMUST00000027863Atp1b111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ATPase, Na+/K+ transporting, beta 1 polypeptide [Source:MGI Symbol;Acc:MGI:88108]
ENSMUSG00000026626ENSMUST00000067976Ppp2r5a11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
protein phosphatase 2, regulatory subunit B (B56), alpha isoform [Source:MGI Symbol;Acc:MGI:2388479]
ENSMUSG00000026696ENSMUST00000050010Vamp411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
vesicle-associated membrane protein 4 [Source:MGI Symbol;Acc:MGI:1858730]
ENSMUSG00000026696ENSMUST00000132158Vamp411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
vesicle-associated membrane protein 4 [Source:MGI Symbol;Acc:MGI:1858730]
ENSMUSG00000026709ENSMUST00000035430Dars211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
aspartyl-tRNA synthetase 2 (mitochondrial) [Source:MGI Symbol;Acc:MGI:2442510]
ENSMUSG00000027520ENSMUST00000029025Zdbf211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
zinc finger, DBF-type containing 2 [Source:MGI Symbol;Acc:MGI:1921134]
ENSMUSG00000027520ENSMUST00000114132Zdbf211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
zinc finger, DBF-type containing 2 [Source:MGI Symbol;Acc:MGI:1921134]
ENSMUSG00000033021ENSMUST00000037796Gmppa11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
GDP-mannose pyrophosphorylase A [Source:MGI Symbol;Acc:MGI:1916330]
ENSMUSG00000033021ENSMUST00000113584Gmppa11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
GDP-mannose pyrophosphorylase A [Source:MGI Symbol;Acc:MGI:1916330]
ENSMUSG00000033722ENSMUST00000035914BC03409011ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cDNA sequence BC034090 [Source:MGI Symbol;Acc:MGI:2672904]
ENSMUSG00000033849ENSMUST00000038252B3galt211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 [Source:MGI Symbol;Acc:MGI:1349461]
ENSMUSG00000033952ENSMUST00000053364Aspm21ForwardView as cDNA map |
View as Table
Internal |
Ensembl
asp (abnormal spindle)-like, microcephaly associated (Drosophila) [Source:MGI Symbol;Acc:MGI:1334448]
ENSMUSG00000033952ENSMUST00000097554Aspm11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
asp (abnormal spindle)-like, microcephaly associated (Drosophila) [Source:MGI Symbol;Acc:MGI:1334448]
ENSMUSG00000033964ENSMUST00000039867Zbtb4111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
zinc finger and BTB domain containing 41 homolog [Source:MGI Symbol;Acc:MGI:2444487]
ENSMUSG00000038702ENSMUST00000035462Dsel11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
dermatan sulfate epimerase-like [Source:MGI Symbol;Acc:MGI:2442948]
ENSMUSG00000038855ENSMUST00000070181Itpkb11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
inositol 1,4,5-trisphosphate 3-kinase B [Source:MGI Symbol;Acc:MGI:109235]
ENSMUSG00000038866ENSMUST00000118196Zcchc211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
zinc finger, CCHC domain containing 2 [Source:MGI Symbol;Acc:MGI:2444114]
ENSMUSG00000039783ENSMUST00000040250Kmo11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
kynurenine 3-monooxygenase (kynurenine 3-hydroxylase) [Source:MGI Symbol;Acc:MGI:2138151]
ENSMUSG00000039783ENSMUST00000097458Kmo11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
kynurenine 3-monooxygenase (kynurenine 3-hydroxylase) [Source:MGI Symbol;Acc:MGI:2138151]
ENSMUSG00000040297ENSMUST00000048377AI84810011ReverseView as cDNA map |
View as Table
Internal |
Ensembl
expressed sequence AI848100 [Source:MGI Symbol;Acc:MGI:2138346]
ENSMUSG00000040710ENSMUST00000043336St8sia411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 [Source:MGI Symbol;Acc:MGI:106018]
ENSMUSG00000040865ENSMUST00000097718Ino80d11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
INO80 complex subunit D [Source:MGI Symbol;Acc:MGI:3027003]
ENSMUSG00000040865ENSMUST00000165066Ino80d11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
INO80 complex subunit D [Source:MGI Symbol;Acc:MGI:3027003]
ENSMUSG00000040865ENSMUST00000172416Ino80d11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
INO80 complex subunit D [Source:MGI Symbol;Acc:MGI:3027003]
ENSMUSG00000041483ENSMUST00000047734Zfp28111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
zinc finger protein 281 [Source:MGI Symbol;Acc:MGI:3029290]
ENSMUSG00000041483ENSMUST00000112046Zfp28111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
zinc finger protein 281 [Source:MGI Symbol;Acc:MGI:3029290]
ENSMUSG00000042510ENSMUST00000039323AA98686011ForwardView as cDNA map |
View as Table
Internal |
Ensembl
expressed sequence AA986860 [Source:MGI Symbol;Acc:MGI:2138143]
ENSMUSG00000046994ENSMUST00000061334Mars211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
methionine-tRNA synthetase 2 (mitochondrial) [Source:MGI Symbol;Acc:MGI:2444136]
ENSMUSG00000050840ENSMUST00000062528Cdh2011ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cadherin 20 [Source:MGI Symbol;Acc:MGI:1346069]
ENSMUSG00000055322ENSMUST00000068832Tns111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
tensin 1 [Source:MGI Symbol;Acc:MGI:104552]
ENSMUSG00000056128ENSMUST00000070048Gm999111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
predicted gene 9991 [Source:MGI Symbol;Acc:MGI:3643217]
ENSMUSG00000059149ENSMUST00000086547Mfsd411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
major facilitator superfamily domain containing 4 [Source:MGI Symbol;Acc:MGI:2442786]
ENSMUSG00000059371ENSMUST00000080831Olfr42711ForwardView as cDNA map |
View as Table
Internal |
Ensembl
olfactory receptor 427 [Source:MGI Symbol;Acc:MGI:3030261]
ENSMUSG00000060568ENSMUST00000074640Fam78b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
family with sequence similarity 78, member B [Source:MGI Symbol;Acc:MGI:2443050]
ENSMUSG00000060568ENSMUST00000126198Fam78b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
family with sequence similarity 78, member B [Source:MGI Symbol;Acc:MGI:2443050]
ENSMUSG00000060568ENSMUST00000156025Fam78b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
family with sequence similarity 78, member B [Source:MGI Symbol;Acc:MGI:2443050]
ENSMUSG00000060568ENSMUST00000165874Fam78b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
family with sequence similarity 78, member B [Source:MGI Symbol;Acc:MGI:2443050]
ENSMUSG00000061616ENSMUST00000081274Olfr1211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
olfactory receptor 12 [Source:MGI Symbol;Acc:MGI:107863]
ENSMUSG00000070644ENSMUST00000135222Etnk211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
ethanolamine kinase 2 [Source:MGI Symbol;Acc:MGI:2443760]
ENSMUSG00000073602ENSMUST00000086694Serpinb3b11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 3B [Source:MGI Symbol;Acc:MGI:2683293]
ENSMUSG00000073602ENSMUST00000166100Serpinb3b11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 3B [Source:MGI Symbol;Acc:MGI:2683293]
ENSMUSG00000000305ENSMUST00000000314Cdh412ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cadherin 4 [Source:MGI Symbol;Acc:MGI:99218]
ENSMUSG00000000305ENSMUST00000108911Cdh412ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cadherin 4 [Source:MGI Symbol;Acc:MGI:99218]
ENSMUSG00000017817ENSMUST00000017961Jph212ReverseView as cDNA map |
View as Table
Internal |
Ensembl
junctophilin 2 [Source:MGI Symbol;Acc:MGI:1891496]
ENSMUSG00000017817ENSMUST00000109425Jph212ReverseView as cDNA map |
View as Table
Internal |
Ensembl
junctophilin 2 [Source:MGI Symbol;Acc:MGI:1891496]
ENSMUSG00000023216ENSMUST00000102490Epb4.212ReverseView as cDNA map |
View as Table
Internal |
Ensembl
erythrocyte protein band 4.2 [Source:MGI Symbol;Acc:MGI:95402]
ENSMUSG00000025314ENSMUST00000026352Ptprj12ReverseView as cDNA map |
View as Table
Internal |
Ensembl
protein tyrosine phosphatase, receptor type, J [Source:MGI Symbol;Acc:MGI:104574]
ENSMUSG00000025314ENSMUST00000111493Ptprj12ReverseView as cDNA map |
View as Table
Internal |
Ensembl
protein tyrosine phosphatase, receptor type, J [Source:MGI Symbol;Acc:MGI:104574]
ENSMUSG00000025314ENSMUST00000111495Ptprj12ReverseView as cDNA map |
View as Table
Internal |
Ensembl
protein tyrosine phosphatase, receptor type, J [Source:MGI Symbol;Acc:MGI:104574]
ENSMUSG00000025314ENSMUST00000169760Ptprj12ReverseView as cDNA map |
View as Table
Internal |
Ensembl
protein tyrosine phosphatase, receptor type, J [Source:MGI Symbol;Acc:MGI:104574]
ENSMUSG00000025716ENSMUST00000044749Myo3a12ForwardView as cDNA map |
View as Table
Internal |
Ensembl
myosin IIIA [Source:MGI Symbol;Acc:MGI:2183924]
ENSMUSG00000025716ENSMUST00000138863Myo3a12ForwardView as cDNA map |
View as Table
Internal |
Ensembl
myosin IIIA [Source:MGI Symbol;Acc:MGI:2183924]
ENSMUSG00000025816ENSMUST00000026925Sec61a212ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Sec61, alpha subunit 2 (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1931071]
ENSMUSG00000025816ENSMUST00000102981Sec61a212ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Sec61, alpha subunit 2 (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1931071]
ENSMUSG00000026768ENSMUST00000028106Itga812ReverseView as cDNA map |
View as Table
Internal |
Ensembl
integrin alpha 8 [Source:MGI Symbol;Acc:MGI:109442]
ENSMUSG00000026840ENSMUST00000028187Lamc312ForwardView as cDNA map |
View as Table
Internal |
Ensembl
laminin gamma 3 [Source:MGI Symbol;Acc:MGI:1344394]
ENSMUSG00000026860ENSMUST00000100215Sh3glb212ReverseView as cDNA map |
View as Table
Internal |
Ensembl
SH3-domain GRB2-like endophilin B2 [Source:MGI Symbol;Acc:MGI:2385131]
ENSMUSG00000026860ENSMUST00000113620Sh3glb212ReverseView as cDNA map |
View as Table
Internal |
Ensembl
SH3-domain GRB2-like endophilin B2 [Source:MGI Symbol;Acc:MGI:2385131]
ENSMUSG00000026860ENSMUST00000113621Sh3glb212ReverseView as cDNA map |
View as Table
Internal |
Ensembl
SH3-domain GRB2-like endophilin B2 [Source:MGI Symbol;Acc:MGI:2385131]
ENSMUSG00000026873ENSMUST00000028232Phf1912ReverseView as cDNA map |
View as Table
Internal |
Ensembl
PHD finger protein 19 [Source:MGI Symbol;Acc:MGI:1921266]
ENSMUSG00000026874ENSMUST00000028233Hc12ReverseView as cDNA map |
View as Table
Internal |
Ensembl
hemolytic complement [Source:MGI Symbol;Acc:MGI:96031]
ENSMUSG00000026875ENSMUST00000172159Traf112ReverseView as cDNA map |
View as Table
Internal |
Ensembl
TNF receptor-associated factor 1 [Source:MGI Symbol;Acc:MGI:101836]
ENSMUSG00000026893ENSMUST00000028257Gca12ForwardView as cDNA map |
View as Table
Internal |
Ensembl
grancalcin [Source:MGI Symbol;Acc:MGI:1918521]
ENSMUSG00000026944ENSMUST00000095124Abca212ForwardView as cDNA map |
View as Table
Internal |
Ensembl
ATP-binding cassette, sub-family A (ABC1), member 2 [Source:MGI Symbol;Acc:MGI:99606]
ENSMUSG00000026944ENSMUST00000102919Abca212ForwardView as cDNA map |
View as Table
Internal |
Ensembl
ATP-binding cassette, sub-family A (ABC1), member 2 [Source:MGI Symbol;Acc:MGI:99606]
ENSMUSG00000026944ENSMUST00000114269Abca212ForwardView as cDNA map |
View as Table
Internal |
Ensembl
ATP-binding cassette, sub-family A (ABC1), member 2 [Source:MGI Symbol;Acc:MGI:99606]
ENSMUSG00000027010ENSMUST00000151937Slc25a1212ReverseView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 25 (mitochondrial carrier, Aralar), member 12 [Source:MGI Symbol;Acc:MGI:1926080]
ENSMUSG00000027014ENSMUST00000065889Cwc2212ReverseView as cDNA map |
View as Table
Internal |
Ensembl
CWC22 spliceosome-associated protein homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2136773]
ENSMUSG00000027014ENSMUST00000111818Cwc2212ReverseView as cDNA map |
View as Table
Internal |
Ensembl
CWC22 spliceosome-associated protein homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2136773]
ENSMUSG00000027014ENSMUST00000111819Cwc2212ReverseView as cDNA map |
View as Table
Internal |
Ensembl
CWC22 spliceosome-associated protein homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2136773]
ENSMUSG00000027014ENSMUST00000111821Cwc2212ReverseView as cDNA map |
View as Table
Internal |
Ensembl
CWC22 spliceosome-associated protein homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2136773]
ENSMUSG00000027014ENSMUST00000111824Cwc2212ReverseView as cDNA map |
View as Table
Internal |
Ensembl
CWC22 spliceosome-associated protein homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2136773]
ENSMUSG00000027035ENSMUST00000028426Lass612ForwardView as cDNA map |
View as Table
Internal |
Ensembl
LAG1 homolog, ceramide synthase 6 [Source:MGI Symbol;Acc:MGI:2442564]
ENSMUSG00000027087ENSMUST00000028499Itgav12ForwardView as cDNA map |
View as Table
Internal |
Ensembl
integrin alpha V [Source:MGI Symbol;Acc:MGI:96608]
ENSMUSG00000027087ENSMUST00000111740Itgav12ForwardView as cDNA map |
View as Table
Internal |
Ensembl
integrin alpha V [Source:MGI Symbol;Acc:MGI:96608]
ENSMUSG00000027130ENSMUST00000110991Slc12a612ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 12, member 6 [Source:MGI Symbol;Acc:MGI:2135960]
ENSMUSG00000027173ENSMUST00000028595Depdc712ReverseView as cDNA map |
View as Table
Internal |
Ensembl
DEP domain containing 7 [Source:MGI Symbol;Acc:MGI:2139258]
ENSMUSG00000027177ENSMUST00000028600Hipk312ReverseView as cDNA map |
View as Table
Internal |
Ensembl
homeodomain interacting protein kinase 3 [Source:MGI Symbol;Acc:MGI:1314882]
ENSMUSG00000027201ENSMUST00000067780Myef212ReverseView as cDNA map |
View as Table
Internal |
Ensembl
myelin basic protein expression factor 2, repressor [Source:MGI Symbol;Acc:MGI:104592]
ENSMUSG00000027201ENSMUST00000110501Myef222ReverseView as cDNA map |
View as Table
Internal |
Ensembl
myelin basic protein expression factor 2, repressor [Source:MGI Symbol;Acc:MGI:104592]
ENSMUSG00000027201ENSMUST00000137091Myef212ReverseView as cDNA map |
View as Table
Internal |
Ensembl
myelin basic protein expression factor 2, repressor [Source:MGI Symbol;Acc:MGI:104592]
ENSMUSG00000027201ENSMUST00000142718Myef212ReverseView as cDNA map |
View as Table
Internal |
Ensembl
myelin basic protein expression factor 2, repressor [Source:MGI Symbol;Acc:MGI:104592]
ENSMUSG00000027201ENSMUST00000147105Myef212ReverseView as cDNA map |
View as Table
Internal |
Ensembl
myelin basic protein expression factor 2, repressor [Source:MGI Symbol;Acc:MGI:104592]
ENSMUSG00000027201ENSMUST00000152367Myef222ReverseView as cDNA map |
View as Table
Internal |
Ensembl
myelin basic protein expression factor 2, repressor [Source:MGI Symbol;Acc:MGI:104592]
ENSMUSG00000027236ENSMUST00000028668Eif3j12ForwardView as cDNA map |
View as Table
Internal |
Ensembl
eukaryotic translation initiation factor 3, subunit J [Source:MGI Symbol;Acc:MGI:1925905]
ENSMUSG00000027245ENSMUST000001106122310003F16Rik12ForwardView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA 2310003F16 gene [Source:MGI Symbol;Acc:MGI:1914943]
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We gratefully acknowledge support of this work by the William M. Keck Foundation