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Genome: Mus Musculus | mRNA | miRBase 18 (Nov. 2011), ENSEMBL 65 (Dec. 2011) and RNA22v2.0
Description: List of transcripts that are targeted by all of the below miRNA identifiers simultaneously
miRNA's: mmu-miR-143-3p (MIMAT0000247)
Filtering By: Base pair min value: 12 | Folding energy max value (Kcal/mol): -12 | Min miRNA targets: 1 | Max p-value: .1


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Gene IDTranscript IDCommon Gene Name# of miRNA targets
for specified miRNAs
ChromosomeStrand DirectionTranscript Link to view miRNA target predictionsGene LinkDescription
ENSMUSG00000001138ENSMUST00000001166Cnnm321ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cyclin M3 [Source:MGI Symbol;Acc:MGI:2151055]
ENSMUSG00000001143ENSMUST00000115011Lman2l21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
lectin, mannose-binding 2-like [Source:MGI Symbol;Acc:MGI:2443010]
ENSMUSG00000001143ENSMUST00000125304Lman2l21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
lectin, mannose-binding 2-like [Source:MGI Symbol;Acc:MGI:2443010]
ENSMUSG00000003134ENSMUST00000054462Tbc1d811ReverseView as cDNA map |
View as Table
Internal |
Ensembl
TBC1 domain family, member 8 [Source:MGI Symbol;Acc:MGI:1927225]
ENSMUSG00000003458ENSMUST00000003550Ncstn21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
nicastrin [Source:MGI Symbol;Acc:MGI:1891700]
ENSMUSG00000004451ENSMUST00000004565Ralb11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
v-ral simian leukemia viral oncogene homolog B (ras related) [Source:MGI Symbol;Acc:MGI:1927244]
ENSMUSG00000004709ENSMUST00000004829Cd24411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
CD244 natural killer cell receptor 2B4 [Source:MGI Symbol;Acc:MGI:109294]
ENSMUSG00000004768ENSMUST00000088287Rab2311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
RAB23, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:99833]
ENSMUSG00000004768ENSMUST00000115174Rab2311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
RAB23, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:99833]
ENSMUSG00000004872ENSMUST00000004994Pax311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
paired box gene 3 [Source:MGI Symbol;Acc:MGI:97487]
ENSMUSG00000004872ENSMUST00000087086Pax311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
paired box gene 3 [Source:MGI Symbol;Acc:MGI:97487]
ENSMUSG00000004880ENSMUST00000005003Lbr11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
lamin B receptor [Source:MGI Symbol;Acc:MGI:2138281]
ENSMUSG00000005338ENSMUST00000111220Cadm331ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cell adhesion molecule 3 [Source:MGI Symbol;Acc:MGI:2137858]
ENSMUSG00000005501ENSMUST00000113153Usp4031ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ubiquitin specific peptidase 40 [Source:MGI Symbol;Acc:MGI:2443184]
ENSMUSG00000005674ENSMUST00000005817Tomm40l21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
translocase of outer mitochondrial membrane 40 homolog-like (yeast) [Source:MGI Symbol;Acc:MGI:3589112]
ENSMUSG00000005674ENSMUST00000111327Tomm40l21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
translocase of outer mitochondrial membrane 40 homolog-like (yeast) [Source:MGI Symbol;Acc:MGI:3589112]
ENSMUSG00000005886ENSMUST00000006037Ncoa221ReverseView as cDNA map |
View as Table
Internal |
Ensembl
nuclear receptor coactivator 2 [Source:MGI Symbol;Acc:MGI:1276533]
ENSMUSG00000005886ENSMUST00000068304Ncoa221ReverseView as cDNA map |
View as Table
Internal |
Ensembl
nuclear receptor coactivator 2 [Source:MGI Symbol;Acc:MGI:1276533]
ENSMUSG00000005886ENSMUST00000081713Ncoa221ReverseView as cDNA map |
View as Table
Internal |
Ensembl
nuclear receptor coactivator 2 [Source:MGI Symbol;Acc:MGI:1276533]
ENSMUSG00000006301ENSMUST00000016309Tmbim111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
transmembrane BAX inhibitor motif containing 1 [Source:MGI Symbol;Acc:MGI:1916910]
ENSMUSG00000006301ENSMUST00000113796Tmbim111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
transmembrane BAX inhibitor motif containing 1 [Source:MGI Symbol;Acc:MGI:1916910]
ENSMUSG00000006403ENSMUST00000006570Adamts421ForwardView as cDNA map |
View as Table
Internal |
Ensembl
a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 4 [Source:MGI Symbol;Acc:MGI:1339949]
ENSMUSG00000006403ENSMUST00000111314Adamts411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 4 [Source:MGI Symbol;Acc:MGI:1339949]
ENSMUSG00000006403ENSMUST00000111315Adamts421ForwardView as cDNA map |
View as Table
Internal |
Ensembl
a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 4 [Source:MGI Symbol;Acc:MGI:1339949]
ENSMUSG00000006412ENSMUST00000135941Pfdn211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
prefoldin 2 [Source:MGI Symbol;Acc:MGI:1276111]
ENSMUSG00000006538ENSMUST00000006713Ihh21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Indian hedgehog [Source:MGI Symbol;Acc:MGI:96533]
ENSMUSG00000006538ENSMUST00000164097Ihh21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Indian hedgehog [Source:MGI Symbol;Acc:MGI:96533]
ENSMUSG00000006542ENSMUST00000081636Prkag321ReverseView as cDNA map |
View as Table
Internal |
Ensembl
protein kinase, AMP-activated, gamma 3 non-catatlytic subunit [Source:MGI Symbol;Acc:MGI:1891343]
ENSMUSG00000006542ENSMUST00000160732Prkag311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
protein kinase, AMP-activated, gamma 3 non-catatlytic subunit [Source:MGI Symbol;Acc:MGI:1891343]
ENSMUSG00000006546ENSMUST00000006721Cryba211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
crystallin, beta A2 [Source:MGI Symbol;Acc:MGI:104336]
ENSMUSG00000006576ENSMUST00000006751Slc4a311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 4 (anion exchanger), member 3 [Source:MGI Symbol;Acc:MGI:109350]
ENSMUSG00000006576ENSMUST00000027415Slc4a311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 4 (anion exchanger), member 3 [Source:MGI Symbol;Acc:MGI:109350]
ENSMUSG00000006576ENSMUST00000113545Slc4a311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 4 (anion exchanger), member 3 [Source:MGI Symbol;Acc:MGI:109350]
ENSMUSG00000006576ENSMUST00000124341Slc4a311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 4 (anion exchanger), member 3 [Source:MGI Symbol;Acc:MGI:109350]
ENSMUSG00000007097ENSMUST00000085913Atp1a231ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ATPase, Na+/K+ transporting, alpha 2 polypeptide [Source:MGI Symbol;Acc:MGI:88106]
ENSMUSG00000007107ENSMUST00000111243Atp1a411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ATPase, Na+/K+ transporting, alpha 4 polypeptide [Source:MGI Symbol;Acc:MGI:1351335]
ENSMUSG00000008475ENSMUST00000077755Arpc511ForwardView as cDNA map |
View as Table
Internal |
Ensembl
actin related protein 2/3 complex, subunit 5 [Source:MGI Symbol;Acc:MGI:1915021]
ENSMUSG00000008475ENSMUST00000097536Arpc511ForwardView as cDNA map |
View as Table
Internal |
Ensembl
actin related protein 2/3 complex, subunit 5 [Source:MGI Symbol;Acc:MGI:1915021]
ENSMUSG00000009418ENSMUST00000040599Nav121ReverseView as cDNA map |
View as Table
Internal |
Ensembl
neuron navigator 1 [Source:MGI Symbol;Acc:MGI:2183683]
ENSMUSG00000009905ENSMUST00000010049Kdsr21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
3-ketodihydrosphingosine reductase [Source:MGI Symbol;Acc:MGI:1918000]
ENSMUSG00000010175ENSMUST00000010319Prox121ReverseView as cDNA map |
View as Table
Internal |
Ensembl
prospero-related homeobox 1 [Source:MGI Symbol;Acc:MGI:97772]
ENSMUSG00000010290ENSMUST00000010434AI59747911ForwardView as cDNA map |
View as Table
Internal |
Ensembl
expressed sequence AI597479 [Source:MGI Symbol;Acc:MGI:2138299]
ENSMUSG00000010311ENSMUST00000010455Optc11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
opticin [Source:MGI Symbol;Acc:MGI:2151113]
ENSMUSG00000010311ENSMUST00000124051Optc11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
opticin [Source:MGI Symbol;Acc:MGI:2151113]
ENSMUSG00000010311ENSMUST00000126123Optc11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
opticin [Source:MGI Symbol;Acc:MGI:2151113]
ENSMUSG00000010311ENSMUST00000149380Optc11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
opticin [Source:MGI Symbol;Acc:MGI:2151113]
ENSMUSG00000010311ENSMUST00000153617Optc11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
opticin [Source:MGI Symbol;Acc:MGI:2151113]
ENSMUSG00000010453ENSMUST000001150184632411B12Rik11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA 4632411B12 gene [Source:MGI Symbol;Acc:MGI:1918055]
ENSMUSG00000010609ENSMUST00000010753Psen211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
presenilin 2 [Source:MGI Symbol;Acc:MGI:109284]
ENSMUSG00000010609ENSMUST00000111105Psen211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
presenilin 2 [Source:MGI Symbol;Acc:MGI:109284]
ENSMUSG00000010609ENSMUST00000111106Psen211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
presenilin 2 [Source:MGI Symbol;Acc:MGI:109284]
ENSMUSG00000010609ENSMUST00000111108Psen211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
presenilin 2 [Source:MGI Symbol;Acc:MGI:109284]
ENSMUSG00000013973ENSMUST00000064950Dedd11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
death effector domain-containing [Source:MGI Symbol;Acc:MGI:1333874]
ENSMUSG00000013973ENSMUST00000097467Dedd11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
death effector domain-containing [Source:MGI Symbol;Acc:MGI:1333874]
ENSMUSG00000013973ENSMUST00000111299Dedd21ForwardView as cDNA map |
View as Table
Internal |
Ensembl
death effector domain-containing [Source:MGI Symbol;Acc:MGI:1333874]
ENSMUSG00000013973ENSMUST00000111300Dedd21ForwardView as cDNA map |
View as Table
Internal |
Ensembl
death effector domain-containing [Source:MGI Symbol;Acc:MGI:1333874]
ENSMUSG00000014602ENSMUST00000086819Kif1a21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
kinesin family member 1A [Source:MGI Symbol;Acc:MGI:108391]
ENSMUSG00000014602ENSMUST00000112958Kif1a21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
kinesin family member 1A [Source:MGI Symbol;Acc:MGI:108391]
ENSMUSG00000014602ENSMUST00000168448Kif1a21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
kinesin family member 1A [Source:MGI Symbol;Acc:MGI:108391]
ENSMUSG00000014602ENSMUST00000171556Kif1a21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
kinesin family member 1A [Source:MGI Symbol;Acc:MGI:108391]
ENSMUSG00000014602ENSMUST00000171796Kif1a21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
kinesin family member 1A [Source:MGI Symbol;Acc:MGI:108391]
ENSMUSG00000015222ENSMUST00000024639Mtap211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
ENSMUSG00000015222ENSMUST00000077355Mtap211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
ENSMUSG00000015222ENSMUST00000114012Mtap211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
ENSMUSG00000015222ENSMUST00000114013Mtap221ForwardView as cDNA map |
View as Table
Internal |
Ensembl
microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
ENSMUSG00000015222ENSMUST00000114015Mtap211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
ENSMUSG00000015222ENSMUST00000114017Mtap211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
ENSMUSG00000015222ENSMUST00000114018Mtap211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
ENSMUSG00000015222ENSMUST00000123647Mtap211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
ENSMUSG00000015222ENSMUST00000171377Mtap211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
ENSMUSG00000015222ENSMUST00000173855Mtap221ForwardView as cDNA map |
View as Table
Internal |
Ensembl
microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
ENSMUSG00000015314ENSMUST00000171330Slamf611ForwardView as cDNA map |
View as Table
Internal |
Ensembl
SLAM family member 6 [Source:MGI Symbol;Acc:MGI:1353620]
ENSMUSG00000015355ENSMUST00000068584Cd4811ForwardView as cDNA map |
View as Table
Internal |
Ensembl
CD48 antigen [Source:MGI Symbol;Acc:MGI:88339]
ENSMUSG00000015484ENSMUST00000015628Fam163a11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
family with sequence similarity 163, member A [Source:MGI Symbol;Acc:MGI:3618859]
ENSMUSG00000015829ENSMUST00000040797Tnr31ForwardView as cDNA map |
View as Table
Internal |
Ensembl
tenascin R [Source:MGI Symbol;Acc:MGI:99516]
ENSMUSG00000016179ENSMUST00000016323Camk1g11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
calcium/calmodulin-dependent protein kinase I gamma [Source:MGI Symbol;Acc:MGI:2388073]
ENSMUSG00000016181ENSMUST00000085555Diexf11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
digestive organ expansion factor homolog (zebrafish) [Source:MGI Symbol;Acc:MGI:2138080]
ENSMUSG00000016262ENSMUST00000155579Sertad411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
SERTA domain containing 4 [Source:MGI Symbol;Acc:MGI:2443496]
ENSMUSG00000016481ENSMUST00000027918Cr1l11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
complement component (3b/4b) receptor 1-like [Source:MGI Symbol;Acc:MGI:88513]
ENSMUSG00000016918ENSMUST00000088585Sulf121ForwardView as cDNA map |
View as Table
Internal |
Ensembl
sulfatase 1 [Source:MGI Symbol;Acc:MGI:2138563]
ENSMUSG00000019230ENSMUST00000112026Lhx911ReverseView as cDNA map |
View as Table
Internal |
Ensembl
LIM homeobox protein 9 [Source:MGI Symbol;Acc:MGI:1316721]
ENSMUSG00000019699ENSMUST00000111159Akt311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
thymoma viral proto-oncogene 3 [Source:MGI Symbol;Acc:MGI:1345147]
ENSMUSG00000022591ENSMUST00000023262Gm974711ForwardView as cDNA map |
View as Table
Internal |
Ensembl
predicted gene 9747 [Source:MGI Symbol;Acc:MGI:3710571]
ENSMUSG00000025774ENSMUST00000026876Crisp421ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cysteine-rich secretory protein 4 [Source:MGI Symbol;Acc:MGI:1925331]
ENSMUSG00000025774ENSMUST00000115340Crisp411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cysteine-rich secretory protein 4 [Source:MGI Symbol;Acc:MGI:1925331]
ENSMUSG00000025774ENSMUST00000115344Crisp411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cysteine-rich secretory protein 4 [Source:MGI Symbol;Acc:MGI:1925331]
ENSMUSG00000025900ENSMUST00000027032Rp111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
retinitis pigmentosa 1 (human) [Source:MGI Symbol;Acc:MGI:1341105]
ENSMUSG00000025900ENSMUST00000115540Rp111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
retinitis pigmentosa 1 (human) [Source:MGI Symbol;Acc:MGI:1341105]
ENSMUSG00000025905ENSMUST00000160777Oprk111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
opioid receptor, kappa 1 [Source:MGI Symbol;Acc:MGI:97439]
ENSMUSG00000025907ENSMUST00000027040Rb1cc111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
RB1-inducible coiled-coil 1 [Source:MGI Symbol;Acc:MGI:1341850]
ENSMUSG00000025911ENSMUST00000144177Adhfe121ForwardView as cDNA map |
View as Table
Internal |
Ensembl
alcohol dehydrogenase, iron containing, 1 [Source:MGI Symbol;Acc:MGI:1923437]
ENSMUSG00000025938ENSMUST00000171848Slco5a121ReverseView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier organic anion transporter family, member 5A1 [Source:MGI Symbol;Acc:MGI:2443431]
ENSMUSG00000025940ENSMUST00000065373Tmem7011ForwardView as cDNA map |
View as Table
Internal |
Ensembl
transmembrane protein 70 [Source:MGI Symbol;Acc:MGI:1915068]
ENSMUSG00000025949ENSMUST00000097707Pikfyve11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
phosphoinositide kinase, FYVE finger containing [Source:MGI Symbol;Acc:MGI:1335106]
ENSMUSG00000025958ENSMUST00000049932Creb121ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cAMP responsive element binding protein 1 [Source:MGI Symbol;Acc:MGI:88494]
ENSMUSG00000025958ENSMUST00000087366Creb121ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cAMP responsive element binding protein 1 [Source:MGI Symbol;Acc:MGI:88494]
ENSMUSG00000025958ENSMUST00000171164Creb121ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cAMP responsive element binding protein 1 [Source:MGI Symbol;Acc:MGI:88494]
ENSMUSG00000025959ENSMUST00000114086Klf711ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Kruppel-like factor 7 (ubiquitous) [Source:MGI Symbol;Acc:MGI:1935151]
ENSMUSG00000025961ENSMUST000000271024933402D24Rik21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA 4933402D24 gene [Source:MGI Symbol;Acc:MGI:1921676]
ENSMUSG00000025962ENSMUST00000027103Fastkd211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
FAST kinase domains 2 [Source:MGI Symbol;Acc:MGI:1922869]
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We gratefully acknowledge support of this work by the William M. Keck Foundation