Back to main page

Genome: Mus Musculus | mRNA | miRBase 18 (Nov. 2011), ENSEMBL 65 (Dec. 2011) and RNA22v2.0
Description: List of transcripts that are targeted by all of the below miRNA identifiers simultaneously
miRNA's: mmu-miR-30d-5p (MIMAT0000515)
Filtering By: Base pair min value: 12 | Folding energy max value (Kcal/mol): -12 | Min miRNA targets: 1 | Max p-value: .1


Please hold, your search is in progress...
TIP! If you show ALL results, you'll be able to dynamically sort by one or multiple columns (hold shift)
TIP! You can save this HTML file locally by going to File->Save As if you want to access it quickly later on


Gene IDTranscript IDCommon Gene Name# of miRNA targets
for specified miRNAs
ChromosomeStrand DirectionTranscript Link to view miRNA target predictionsGene LinkDescription
ENSMUSG00000004709ENSMUST00000004829Cd24411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
CD244 natural killer cell receptor 2B4 [Source:MGI Symbol;Acc:MGI:109294]
ENSMUSG00000004709ENSMUST00000163487Cd24411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
CD244 natural killer cell receptor 2B4 [Source:MGI Symbol;Acc:MGI:109294]
ENSMUSG00000005677ENSMUST00000005820Nr1i321ForwardView as cDNA map |
View as Table
Internal |
Ensembl
nuclear receptor subfamily 1, group I, member 3 [Source:MGI Symbol;Acc:MGI:1346307]
ENSMUSG00000005677ENSMUST00000111328Nr1i321ForwardView as cDNA map |
View as Table
Internal |
Ensembl
nuclear receptor subfamily 1, group I, member 3 [Source:MGI Symbol;Acc:MGI:1346307]
ENSMUSG00000005886ENSMUST00000006037Ncoa211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
nuclear receptor coactivator 2 [Source:MGI Symbol;Acc:MGI:1276533]
ENSMUSG00000005886ENSMUST00000068304Ncoa211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
nuclear receptor coactivator 2 [Source:MGI Symbol;Acc:MGI:1276533]
ENSMUSG00000005886ENSMUST00000081713Ncoa211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
nuclear receptor coactivator 2 [Source:MGI Symbol;Acc:MGI:1276533]
ENSMUSG00000006546ENSMUST00000006721Cryba211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
crystallin, beta A2 [Source:MGI Symbol;Acc:MGI:104336]
ENSMUSG00000009905ENSMUST00000010049Kdsr11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
3-ketodihydrosphingosine reductase [Source:MGI Symbol;Acc:MGI:1918000]
ENSMUSG00000015961ENSMUST00000016105Adss11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
adenylosuccinate synthetase, non muscle [Source:MGI Symbol;Acc:MGI:87948]
ENSMUSG00000025774ENSMUST00000026876Crisp411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cysteine-rich secretory protein 4 [Source:MGI Symbol;Acc:MGI:1925331]
ENSMUSG00000025774ENSMUST00000115340Crisp411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cysteine-rich secretory protein 4 [Source:MGI Symbol;Acc:MGI:1925331]
ENSMUSG00000025774ENSMUST00000115344Crisp411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cysteine-rich secretory protein 4 [Source:MGI Symbol;Acc:MGI:1925331]
ENSMUSG00000025900ENSMUST00000027032Rp111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
retinitis pigmentosa 1 (human) [Source:MGI Symbol;Acc:MGI:1341105]
ENSMUSG00000025911ENSMUST00000144177Adhfe111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
alcohol dehydrogenase, iron containing, 1 [Source:MGI Symbol;Acc:MGI:1923437]
ENSMUSG00000025962ENSMUST00000027103Fastkd211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
FAST kinase domains 2 [Source:MGI Symbol;Acc:MGI:1922869]
ENSMUSG00000026028ENSMUST00000027186Trak211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
trafficking protein, kinesin binding 2 [Source:MGI Symbol;Acc:MGI:1918077]
ENSMUSG00000026031ENSMUST00000114313Cflar11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
CASP8 and FADD-like apoptosis regulator [Source:MGI Symbol;Acc:MGI:1336166]
ENSMUSG00000026035ENSMUST00000081677Ppil311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
peptidylprolyl isomerase (cyclophilin)-like 3 [Source:MGI Symbol;Acc:MGI:1917475]
ENSMUSG00000026035ENSMUST00000114348Ppil311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
peptidylprolyl isomerase (cyclophilin)-like 3 [Source:MGI Symbol;Acc:MGI:1917475]
ENSMUSG00000026035ENSMUST00000117069Ppil311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
peptidylprolyl isomerase (cyclophilin)-like 3 [Source:MGI Symbol;Acc:MGI:1917475]
ENSMUSG00000026069ENSMUST00000053043Il1rl111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
interleukin 1 receptor-like 1 [Source:MGI Symbol;Acc:MGI:98427]
ENSMUSG00000026069ENSMUST00000097772Il1rl111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
interleukin 1 receptor-like 1 [Source:MGI Symbol;Acc:MGI:98427]
ENSMUSG00000026082ENSMUST00000027251Rev111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
REV1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1929074]
ENSMUSG00000026131ENSMUST00000097785Dst11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
dystonin [Source:MGI Symbol;Acc:MGI:104627]
ENSMUSG00000026131ENSMUST00000097786Dst11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
dystonin [Source:MGI Symbol;Acc:MGI:104627]
ENSMUSG00000026142ENSMUST00000027322Rhbdd111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
rhomboid domain containing 1 [Source:MGI Symbol;Acc:MGI:1924117]
ENSMUSG00000026142ENSMUST00000165975Rhbdd111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
rhomboid domain containing 1 [Source:MGI Symbol;Acc:MGI:1924117]
ENSMUSG00000026158ENSMUST00000027343Ogfrl111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
opioid growth factor receptor-like 1 [Source:MGI Symbol;Acc:MGI:1917405]
ENSMUSG00000026240ENSMUST00000027446Cops7b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
COP9 (constitutive photomorphogenic) homolog, subunit 7b (Arabidopsis thaliana) [Source:MGI Symbol;Acc:MGI:1349388]
ENSMUSG00000026240ENSMUST00000121534Cops7b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
COP9 (constitutive photomorphogenic) homolog, subunit 7b (Arabidopsis thaliana) [Source:MGI Symbol;Acc:MGI:1349388]
ENSMUSG00000026251ENSMUST00000073252Chrnd11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cholinergic receptor, nicotinic, delta polypeptide [Source:MGI Symbol;Acc:MGI:87893]
ENSMUSG00000026308ENSMUST00000027533Klhl3011ForwardView as cDNA map |
View as Table
Internal |
Ensembl
kelch-like 30 (Drosophila) [Source:MGI Symbol;Acc:MGI:1918038]
ENSMUSG00000026368ENSMUST00000027615F13b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
coagulation factor XIII, beta subunit [Source:MGI Symbol;Acc:MGI:88379]
ENSMUSG00000026374ENSMUST00000027623Tsn11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
translin [Source:MGI Symbol;Acc:MGI:109263]
ENSMUSG00000026383ENSMUST00000052404Epb4.1l511ReverseView as cDNA map |
View as Table
Internal |
Ensembl
erythrocyte protein band 4.1-like 5 [Source:MGI Symbol;Acc:MGI:103006]
ENSMUSG00000026383ENSMUST00000163147Epb4.1l511ReverseView as cDNA map |
View as Table
Internal |
Ensembl
erythrocyte protein band 4.1-like 5 [Source:MGI Symbol;Acc:MGI:103006]
ENSMUSG00000026393ENSMUST00000027642Nek711ReverseView as cDNA map |
View as Table
Internal |
Ensembl
NIMA (never in mitosis gene a)-related expressed kinase 7 [Source:MGI Symbol;Acc:MGI:1890645]
ENSMUSG00000026401ENSMUST00000027654Daf211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
decay accelerating factor 2 [Source:MGI Symbol;Acc:MGI:104849]
ENSMUSG00000026401ENSMUST00000112488Daf211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
decay accelerating factor 2 [Source:MGI Symbol;Acc:MGI:104849]
ENSMUSG00000026401ENSMUST00000119432Daf211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
decay accelerating factor 2 [Source:MGI Symbol;Acc:MGI:104849]
ENSMUSG00000026442ENSMUST00000043189Nfasc11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
neurofascin [Source:MGI Symbol;Acc:MGI:104753]
ENSMUSG00000026442ENSMUST00000094569Nfasc11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
neurofascin [Source:MGI Symbol;Acc:MGI:104753]
ENSMUSG00000026468ENSMUST00000027740Lhx411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
LIM homeobox protein 4 [Source:MGI Symbol;Acc:MGI:101776]
ENSMUSG00000026502ENSMUST00000027783Pppde111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
PPPDE peptidase domain containing 1 [Source:MGI Symbol;Acc:MGI:1926075]
ENSMUSG00000026516ENSMUST00000027797Nvl11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
nuclear VCP-like [Source:MGI Symbol;Acc:MGI:1914709]
ENSMUSG00000026523ENSMUST00000097457Wdr6411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
WD repeat domain 64 [Source:MGI Symbol;Acc:MGI:1923070]
ENSMUSG00000026523ENSMUST00000171939Wdr6411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
WD repeat domain 64 [Source:MGI Symbol;Acc:MGI:1923070]
ENSMUSG00000026554ENSMUST00000074144Dcaf811ForwardView as cDNA map |
View as Table
Internal |
Ensembl
DDB1 and CUL4 associated factor 8 [Source:MGI Symbol;Acc:MGI:91860]
ENSMUSG00000026565ENSMUST00000160260Pou2f111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
POU domain, class 2, transcription factor 1 [Source:MGI Symbol;Acc:MGI:101898]
ENSMUSG00000026566ENSMUST00000111435Mpzl111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
myelin protein zero-like 1 [Source:MGI Symbol;Acc:MGI:1915731]
ENSMUSG00000026596ENSMUST00000166172Abl211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
v-abl Abelson murine leukemia viral oncogene homolog 2 (arg, Abelson-related gene) [Source:MGI Symbol;Acc:MGI:87860]
ENSMUSG00000026620ENSMUST00000027929Mark111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
MAP/microtubule affinity-regulating kinase 1 [Source:MGI Symbol;Acc:MGI:2664902]
ENSMUSG00000026623ENSMUST00000110855Lpgat111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
lysophosphatidylglycerol acyltransferase 1 [Source:MGI Symbol;Acc:MGI:2446186]
ENSMUSG00000026623ENSMUST00000110856Lpgat111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
lysophosphatidylglycerol acyltransferase 1 [Source:MGI Symbol;Acc:MGI:2446186]
ENSMUSG00000026673ENSMUST00000027984Sh2d1b111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
SH2 domain protein 1B1 [Source:MGI Symbol;Acc:MGI:1349420]
ENSMUSG00000026678ENSMUST00000027997Rgs511ForwardView as cDNA map |
View as Table
Internal |
Ensembl
regulator of G-protein signaling 5 [Source:MGI Symbol;Acc:MGI:1098434]
ENSMUSG00000026687ENSMUST00000028004Aldh9a111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
aldehyde dehydrogenase 9, subfamily A1 [Source:MGI Symbol;Acc:MGI:1861622]
ENSMUSG00000026725ENSMUST00000039178Tnn11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
tenascin N [Source:MGI Symbol;Acc:MGI:2665790]
ENSMUSG00000033021ENSMUST00000037796Gmppa11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
GDP-mannose pyrophosphorylase A [Source:MGI Symbol;Acc:MGI:1916330]
ENSMUSG00000033021ENSMUST00000113584Gmppa11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
GDP-mannose pyrophosphorylase A [Source:MGI Symbol;Acc:MGI:1916330]
ENSMUSG00000033124ENSMUST00000040689Atg9a11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
autophagy-related 9A (yeast) [Source:MGI Symbol;Acc:MGI:2138446]
ENSMUSG00000033849ENSMUST00000038252B3galt211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 [Source:MGI Symbol;Acc:MGI:1349461]
ENSMUSG00000034292ENSMUST00000047242Traf3ip111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
TRAF3 interacting protein 1 [Source:MGI Symbol;Acc:MGI:1921269]
ENSMUSG00000038174ENSMUST00000038372Fam126b11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
family with sequence similarity 126, member B [Source:MGI Symbol;Acc:MGI:1098784]
ENSMUSG00000038174ENSMUST00000161600Fam126b11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
family with sequence similarity 126, member B [Source:MGI Symbol;Acc:MGI:1098784]
ENSMUSG00000038305ENSMUST00000041978Spats2l11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
spermatogenesis associated, serine-rich 2-like [Source:MGI Symbol;Acc:MGI:1914448]
ENSMUSG00000038305ENSMUST00000167085Spats2l11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
spermatogenesis associated, serine-rich 2-like [Source:MGI Symbol;Acc:MGI:1914448]
ENSMUSG00000038702ENSMUST00000035462Dsel11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
dermatan sulfate epimerase-like [Source:MGI Symbol;Acc:MGI:2442948]
ENSMUSG00000039318ENSMUST00000069652Rab3gap211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
RAB3 GTPase activating protein subunit 2 [Source:MGI Symbol;Acc:MGI:1916043]
ENSMUSG00000040113ENSMUST00000159679Mettl11b11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
methyltransferase like 11B [Source:MGI Symbol;Acc:MGI:2685053]
ENSMUSG00000040297ENSMUST00000048377AI84810021ReverseView as cDNA map |
View as Table
Internal |
Ensembl
expressed sequence AI848100 [Source:MGI Symbol;Acc:MGI:2138346]
ENSMUSG00000040596ENSMUST00000111411Pogk21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
pogo transposable element with KRAB domain [Source:MGI Symbol;Acc:MGI:1918842]
ENSMUSG00000040596ENSMUST00000128861Pogk11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
pogo transposable element with KRAB domain [Source:MGI Symbol;Acc:MGI:1918842]
ENSMUSG00000040596ENSMUST00000131487Pogk21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
pogo transposable element with KRAB domain [Source:MGI Symbol;Acc:MGI:1918842]
ENSMUSG00000040596ENSMUST00000169324Pogk21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
pogo transposable element with KRAB domain [Source:MGI Symbol;Acc:MGI:1918842]
ENSMUSG00000040612ENSMUST00000038620Ildr211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
immunoglobulin-like domain containing receptor 2 [Source:MGI Symbol;Acc:MGI:1196370]
ENSMUSG00000040612ENSMUST00000111416Ildr211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
immunoglobulin-like domain containing receptor 2 [Source:MGI Symbol;Acc:MGI:1196370]
ENSMUSG00000040612ENSMUST00000168893Ildr211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
immunoglobulin-like domain containing receptor 2 [Source:MGI Symbol;Acc:MGI:1196370]
ENSMUSG00000041303ENSMUST00000041638Gtf3c311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
general transcription factor IIIC, polypeptide 3 [Source:MGI Symbol;Acc:MGI:2138383]
ENSMUSG00000041426ENSMUST00000044478Hibch11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
3-hydroxyisobutyryl-Coenzyme A hydrolase [Source:MGI Symbol;Acc:MGI:1923792]
ENSMUSG00000041684ENSMUST00000114709Bivm11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
basic, immunoglobulin-like variable motif containing [Source:MGI Symbol;Acc:MGI:2179809]
ENSMUSG00000041757ENSMUST00000038295Plekha611ForwardView as cDNA map |
View as Table
Internal |
Ensembl
pleckstrin homology domain containing, family A member 6 [Source:MGI Symbol;Acc:MGI:2388662]
ENSMUSG00000041757ENSMUST00000086504Plekha611ForwardView as cDNA map |
View as Table
Internal |
Ensembl
pleckstrin homology domain containing, family A member 6 [Source:MGI Symbol;Acc:MGI:2388662]
ENSMUSG00000042501ENSMUST00000035577Cpa611ReverseView as cDNA map |
View as Table
Internal |
Ensembl
carboxypeptidase A6 [Source:MGI Symbol;Acc:MGI:3045348]
ENSMUSG00000047330ENSMUST00000057262Kcne411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
potassium voltage-gated channel, Isk-related subfamily, gene 4 [Source:MGI Symbol;Acc:MGI:1891125]
ENSMUSG00000047330ENSMUST00000113517Kcne411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
potassium voltage-gated channel, Isk-related subfamily, gene 4 [Source:MGI Symbol;Acc:MGI:1891125]
ENSMUSG00000055013ENSMUST00000027521Agap111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 [Source:MGI Symbol;Acc:MGI:2653690]
ENSMUSG00000055567ENSMUST00000061620Unc8011ForwardView as cDNA map |
View as Table
Internal |
Ensembl
unc-80 homolog (C. elegans) [Source:MGI Symbol;Acc:MGI:2652882]
ENSMUSG00000058665ENSMUST00000079721En111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
engrailed 1 [Source:MGI Symbol;Acc:MGI:95389]
ENSMUSG00000062169ENSMUST00000134115Cnih411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cornichon homolog 4 (Drosophila) [Source:MGI Symbol;Acc:MGI:1925828]
ENSMUSG00000067028ENSMUST00000086738Cntnap5b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
contactin associated protein-like 5B [Source:MGI Symbol;Acc:MGI:3664583]
ENSMUSG00000070695ENSMUST00000043725Cntnap5a11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
contactin associated protein-like 5A [Source:MGI Symbol;Acc:MGI:3643623]
ENSMUSG00000070695ENSMUST00000094621Cntnap5a11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
contactin associated protein-like 5A [Source:MGI Symbol;Acc:MGI:3643623]
ENSMUSG00000073616ENSMUST00000112999Myeov211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
myeloma overexpressed 2 [Source:MGI Symbol;Acc:MGI:1914165]
ENSMUSG00000079588ENSMUST00000114765Tmem18211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
transmembrane protein 182 [Source:MGI Symbol;Acc:MGI:1923725]
ENSMUSG00000091017ENSMUST00000171798Fam71a11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
family with sequence similarity 71, member A [Source:MGI Symbol;Acc:MGI:3588202]
ENSMUSG00000002546ENSMUST00000100194Golga212ForwardView as cDNA map |
View as Table
Internal |
Ensembl
golgi autoantigen, golgin subfamily a, 2 [Source:MGI Symbol;Acc:MGI:2139395]
ENSMUSG00000002546ENSMUST00000113377Golga212ForwardView as cDNA map |
View as Table
Internal |
Ensembl
golgi autoantigen, golgin subfamily a, 2 [Source:MGI Symbol;Acc:MGI:2139395]
ENSMUSG00000002546ENSMUST00000113386Golga212ForwardView as cDNA map |
View as Table
Internal |
Ensembl
golgi autoantigen, golgin subfamily a, 2 [Source:MGI Symbol;Acc:MGI:2139395]
Please email us for questions and/or suggestions
GUI created by the Computational Medicine Center at the Sidney Kimmel Medical College of Thomas Jefferson University
We gratefully acknowledge support of this work by the William M. Keck Foundation