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Genome: Mus Musculus | mRNA | miRBase 18 (Nov. 2011), ENSEMBL 65 (Dec. 2011) and RNA22v2.0
Description: List of transcripts that are targeted by all of the below miRNA identifiers simultaneously
miRNA's: mmu-miR-216a-5p (MIMAT0000662)
Filtering By: Base pair min value: 12 | Folding energy max value (Kcal/mol): -12 | Min miRNA targets: 1 | Max p-value: .1


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Gene IDTranscript IDCommon Gene Name# of miRNA targets
for specified miRNAs
ChromosomeStrand DirectionTranscript Link to view miRNA target predictionsGene LinkDescription
ENSMUSG00000004364ENSMUST00000163119Cul311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cullin 3 [Source:MGI Symbol;Acc:MGI:1347360]
ENSMUSG00000004364ENSMUST00000164108Cul311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cullin 3 [Source:MGI Symbol;Acc:MGI:1347360]
ENSMUSG00000004768ENSMUST00000088287Rab2311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
RAB23, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:99833]
ENSMUSG00000004768ENSMUST00000115174Rab2321ForwardView as cDNA map |
View as Table
Internal |
Ensembl
RAB23, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:99833]
ENSMUSG00000005677ENSMUST00000005820Nr1i311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
nuclear receptor subfamily 1, group I, member 3 [Source:MGI Symbol;Acc:MGI:1346307]
ENSMUSG00000005677ENSMUST00000111328Nr1i311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
nuclear receptor subfamily 1, group I, member 3 [Source:MGI Symbol;Acc:MGI:1346307]
ENSMUSG00000006301ENSMUST00000113796Tmbim121ReverseView as cDNA map |
View as Table
Internal |
Ensembl
transmembrane BAX inhibitor motif containing 1 [Source:MGI Symbol;Acc:MGI:1916910]
ENSMUSG00000009418ENSMUST00000040599Nav111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
neuron navigator 1 [Source:MGI Symbol;Acc:MGI:2183683]
ENSMUSG00000010175ENSMUST00000010319Prox111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
prospero-related homeobox 1 [Source:MGI Symbol;Acc:MGI:97772]
ENSMUSG00000010311ENSMUST00000010455Optc11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
opticin [Source:MGI Symbol;Acc:MGI:2151113]
ENSMUSG00000010311ENSMUST00000124051Optc11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
opticin [Source:MGI Symbol;Acc:MGI:2151113]
ENSMUSG00000015484ENSMUST00000015628Fam163a21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
family with sequence similarity 163, member A [Source:MGI Symbol;Acc:MGI:3618859]
ENSMUSG00000015961ENSMUST00000016105Adss11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
adenylosuccinate synthetase, non muscle [Source:MGI Symbol;Acc:MGI:87948]
ENSMUSG00000016194ENSMUST00000016338Hsd11b111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
hydroxysteroid 11-beta dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:103562]
ENSMUSG00000016194ENSMUST00000160929Hsd11b111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
hydroxysteroid 11-beta dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:103562]
ENSMUSG00000016194ENSMUST00000161737Hsd11b111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
hydroxysteroid 11-beta dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:103562]
ENSMUSG00000020423ENSMUST00000020692Btg211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
B-cell translocation gene 2, anti-proliferative [Source:MGI Symbol;Acc:MGI:108384]
ENSMUSG00000025903ENSMUST00000027036Lypla111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
lysophospholipase 1 [Source:MGI Symbol;Acc:MGI:1344588]
ENSMUSG00000025909ENSMUST00000132064Sntg111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
syntrophin, gamma 1 [Source:MGI Symbol;Acc:MGI:1918346]
ENSMUSG00000025909ENSMUST00000140295Sntg111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
syntrophin, gamma 1 [Source:MGI Symbol;Acc:MGI:1918346]
ENSMUSG00000025938ENSMUST00000171848Slco5a111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier organic anion transporter family, member 5A1 [Source:MGI Symbol;Acc:MGI:2443431]
ENSMUSG00000025952ENSMUST00000027089Crygc11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
crystallin, gamma C [Source:MGI Symbol;Acc:MGI:88523]
ENSMUSG00000025952ENSMUST00000114064Crygc11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
crystallin, gamma C [Source:MGI Symbol;Acc:MGI:88523]
ENSMUSG00000025958ENSMUST00000049932Creb111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cAMP responsive element binding protein 1 [Source:MGI Symbol;Acc:MGI:88494]
ENSMUSG00000025958ENSMUST00000087366Creb111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cAMP responsive element binding protein 1 [Source:MGI Symbol;Acc:MGI:88494]
ENSMUSG00000025958ENSMUST00000171164Creb111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cAMP responsive element binding protein 1 [Source:MGI Symbol;Acc:MGI:88494]
ENSMUSG00000025979ENSMUST00000162364Mob411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
MOB family member 4, phocein [Source:MGI Symbol;Acc:MGI:104899]
ENSMUSG00000025982ENSMUST00000027127Sf3b111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
splicing factor 3b, subunit 1 [Source:MGI Symbol;Acc:MGI:1932339]
ENSMUSG00000025983ENSMUST00000027128Ccdc15011ForwardView as cDNA map |
View as Table
Internal |
Ensembl
coiled-coil domain containing 150 [Source:MGI Symbol;Acc:MGI:1925266]
ENSMUSG00000025986ENSMUST00000027131Slc39a1011ReverseView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 39 (zinc transporter), member 10 [Source:MGI Symbol;Acc:MGI:1914515]
ENSMUSG00000025991ENSMUST00000027144Cps111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
carbamoyl-phosphate synthetase 1 [Source:MGI Symbol;Acc:MGI:891996]
ENSMUSG00000026028ENSMUST00000027186Trak231ReverseView as cDNA map |
View as Table
Internal |
Ensembl
trafficking protein, kinesin binding 2 [Source:MGI Symbol;Acc:MGI:1918077]
ENSMUSG00000026036ENSMUST00000087521Nif3l111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Ngg1 interacting factor 3-like 1 (S. pombe) [Source:MGI Symbol;Acc:MGI:1929485]
ENSMUSG00000026036ENSMUST00000171597Nif3l111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Ngg1 interacting factor 3-like 1 (S. pombe) [Source:MGI Symbol;Acc:MGI:1929485]
ENSMUSG00000026039ENSMUST00000027202Sgol211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
shugoshin-like 2 (S. pombe) [Source:MGI Symbol;Acc:MGI:1098767]
ENSMUSG00000026062ENSMUST00000027231Slc9a211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 9 (sodium/hydrogen exchanger), member 2 [Source:MGI Symbol;Acc:MGI:105075]
ENSMUSG00000026065ENSMUST00000027233Slc9a411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 9 (sodium/hydrogen exchanger), member 4 [Source:MGI Symbol;Acc:MGI:105074]
ENSMUSG00000026072ENSMUST00000027241Il1r111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
interleukin 1 receptor, type I [Source:MGI Symbol;Acc:MGI:96545]
ENSMUSG00000026072ENSMUST00000114795Il1r111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
interleukin 1 receptor, type I [Source:MGI Symbol;Acc:MGI:96545]
ENSMUSG00000026077ENSMUST00000056815Npas211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neuronal PAS domain protein 2 [Source:MGI Symbol;Acc:MGI:109232]
ENSMUSG00000026083ENSMUST00000027252Eif5b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
eukaryotic translation initiation factor 5B [Source:MGI Symbol;Acc:MGI:2441772]
ENSMUSG00000026096ENSMUST00000027265Osgepl111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
O-sialoglycoprotein endopeptidase-like 1 [Source:MGI Symbol;Acc:MGI:1919335]
ENSMUSG00000026096ENSMUST00000114484Osgepl111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
O-sialoglycoprotein endopeptidase-like 1 [Source:MGI Symbol;Acc:MGI:1919335]
ENSMUSG00000026098ENSMUST00000027267Pms111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
postmeiotic segregation increased 1 (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1202302]
ENSMUSG00000026107ENSMUST00000027279Obfc2a11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
oligonucleotide/oligosaccharide-binding fold containing 2A [Source:MGI Symbol;Acc:MGI:1923258]
ENSMUSG00000026131ENSMUST00000097785Dst31ForwardView as cDNA map |
View as Table
Internal |
Ensembl
dystonin [Source:MGI Symbol;Acc:MGI:104627]
ENSMUSG00000026131ENSMUST00000097786Dst21ForwardView as cDNA map |
View as Table
Internal |
Ensembl
dystonin [Source:MGI Symbol;Acc:MGI:104627]
ENSMUSG00000026147ENSMUST00000088349Col9a111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
collagen, type IX, alpha 1 [Source:MGI Symbol;Acc:MGI:88465]
ENSMUSG00000026172ENSMUST00000027358Bcs1l11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
BCS1-like (yeast) [Source:MGI Symbol;Acc:MGI:1914071]
ENSMUSG00000026172ENSMUST00000113732Bcs1l11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
BCS1-like (yeast) [Source:MGI Symbol;Acc:MGI:1914071]
ENSMUSG00000026172ENSMUST00000113733Bcs1l11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
BCS1-like (yeast) [Source:MGI Symbol;Acc:MGI:1914071]
ENSMUSG00000026173ENSMUST00000027362Plcd411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
phospholipase C, delta 4 [Source:MGI Symbol;Acc:MGI:107469]
ENSMUSG00000026173ENSMUST00000113749Plcd411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
phospholipase C, delta 4 [Source:MGI Symbol;Acc:MGI:107469]
ENSMUSG00000026192ENSMUST00000027384Atic11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase [Source:MGI Symbol;Acc:MGI:1351352]
ENSMUSG00000026196ENSMUST00000027393Bard111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
BRCA1 associated RING domain 1 [Source:MGI Symbol;Acc:MGI:1328361]
ENSMUSG00000026208ENSMUST00000027409Des11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
desmin [Source:MGI Symbol;Acc:MGI:94885]
ENSMUSG00000026219ENSMUST00000027421Trip1211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
thyroid hormone receptor interactor 12 [Source:MGI Symbol;Acc:MGI:1309481]
ENSMUSG00000026234ENSMUST00000027438Ncl21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
nucleolin [Source:MGI Symbol;Acc:MGI:97286]
ENSMUSG00000026249ENSMUST00000027467Serpine211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
serine (or cysteine) peptidase inhibitor, clade E, member 2 [Source:MGI Symbol;Acc:MGI:101780]
ENSMUSG00000026273ENSMUST00000027492Mterfd211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
MTERF domain containing 2 [Source:MGI Symbol;Acc:MGI:1918355]
ENSMUSG00000026275ENSMUST00000027494Ppp1r711ForwardView as cDNA map |
View as Table
Internal |
Ensembl
protein phosphatase 1, regulatory (inhibitor) subunit 7 [Source:MGI Symbol;Acc:MGI:1913635]
ENSMUSG00000026276ENSMUST00000027495Sept221ForwardView as cDNA map |
View as Table
Internal |
Ensembl
septin 2 [Source:MGI Symbol;Acc:MGI:97298]
ENSMUSG00000026276ENSMUST00000168776Sept211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
septin 2 [Source:MGI Symbol;Acc:MGI:97298]
ENSMUSG00000026289ENSMUST00000027512Atg16l121ForwardView as cDNA map |
View as Table
Internal |
Ensembl
autophagy-related 16-like 1 (yeast) [Source:MGI Symbol;Acc:MGI:1924290]
ENSMUSG00000026289ENSMUST00000113186Atg16l121ForwardView as cDNA map |
View as Table
Internal |
Ensembl
autophagy-related 16-like 1 (yeast) [Source:MGI Symbol;Acc:MGI:1924290]
ENSMUSG00000026305ENSMUST00000097649Lrrfip111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
leucine rich repeat (in FLII) interacting protein 1 [Source:MGI Symbol;Acc:MGI:1342770]
ENSMUSG00000026311ENSMUST00000027538Asb111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
ankyrin repeat and SOCS box-containing 1 [Source:MGI Symbol;Acc:MGI:1929735]
ENSMUSG00000026311ENSMUST00000163232Asb111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
ankyrin repeat and SOCS box-containing 1 [Source:MGI Symbol;Acc:MGI:1929735]
ENSMUSG00000026311ENSMUST00000164117Asb111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
ankyrin repeat and SOCS box-containing 1 [Source:MGI Symbol;Acc:MGI:1929735]
ENSMUSG00000026312ENSMUST00000027542Cdh711ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cadherin 7, type 2 [Source:MGI Symbol;Acc:MGI:2442792]
ENSMUSG00000026312ENSMUST00000112701Cdh711ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cadherin 7, type 2 [Source:MGI Symbol;Acc:MGI:2442792]
ENSMUSG00000026312ENSMUST00000172005Cdh711ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cadherin 7, type 2 [Source:MGI Symbol;Acc:MGI:2442792]
ENSMUSG00000026361ENSMUST00000018337Cdc7311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2384876]
ENSMUSG00000026383ENSMUST00000052404Epb4.1l511ReverseView as cDNA map |
View as Table
Internal |
Ensembl
erythrocyte protein band 4.1-like 5 [Source:MGI Symbol;Acc:MGI:103006]
ENSMUSG00000026383ENSMUST00000163147Epb4.1l511ReverseView as cDNA map |
View as Table
Internal |
Ensembl
erythrocyte protein band 4.1-like 5 [Source:MGI Symbol;Acc:MGI:103006]
ENSMUSG00000026390ENSMUST00000027639Marco11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
macrophage receptor with collagenous structure [Source:MGI Symbol;Acc:MGI:1309998]
ENSMUSG00000026398ENSMUST00000027649Nr5a211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
nuclear receptor subfamily 5, group A, member 2 [Source:MGI Symbol;Acc:MGI:1346834]
ENSMUSG00000026409ENSMUST00000050406Pfkfb211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 [Source:MGI Symbol;Acc:MGI:107815]
ENSMUSG00000026425ENSMUST00000097588Srgap221ReverseView as cDNA map |
View as Table
Internal |
Ensembl
SLIT-ROBO Rho GTPase activating protein 2 [Source:MGI Symbol;Acc:MGI:109605]
ENSMUSG00000026434ENSMUST00000062264Nucks121ForwardView as cDNA map |
View as Table
Internal |
Ensembl
nuclear casein kinase and cyclin-dependent kinase substrate 1 [Source:MGI Symbol;Acc:MGI:1934811]
ENSMUSG00000026435ENSMUST00000027695Slc45a311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 45, member 3 [Source:MGI Symbol;Acc:MGI:1922082]
ENSMUSG00000026437ENSMUST00000027697Cdk1811ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cyclin-dependent kinase 18 [Source:MGI Symbol;Acc:MGI:97518]
ENSMUSG00000026443ENSMUST00000027706Lrrn221ForwardView as cDNA map |
View as Table
Internal |
Ensembl
leucine rich repeat protein 2, neuronal [Source:MGI Symbol;Acc:MGI:106037]
ENSMUSG00000026457ENSMUST00000027727Adipor111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
adiponectin receptor 1 [Source:MGI Symbol;Acc:MGI:1919924]
ENSMUSG00000026457ENSMUST00000112237Adipor111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
adiponectin receptor 1 [Source:MGI Symbol;Acc:MGI:1919924]
ENSMUSG00000026459ENSMUST00000027730Myog11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
myogenin [Source:MGI Symbol;Acc:MGI:97276]
ENSMUSG00000026469ENSMUST00000027741Xpr111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
xenotropic and polytropic retrovirus receptor 1 [Source:MGI Symbol;Acc:MGI:97932]
ENSMUSG00000026484ENSMUST00000076110Rnf211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ring finger protein 2 [Source:MGI Symbol;Acc:MGI:1101759]
ENSMUSG00000026502ENSMUST00000027783Pppde111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
PPPDE peptidase domain containing 1 [Source:MGI Symbol;Acc:MGI:1926075]
ENSMUSG00000026502ENSMUST00000161075Pppde111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
PPPDE peptidase domain containing 1 [Source:MGI Symbol;Acc:MGI:1926075]
ENSMUSG00000026510ENSMUST00000117245Trp53bp211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
transformation related protein 53 binding protein 2 [Source:MGI Symbol;Acc:MGI:2138319]
ENSMUSG00000026516ENSMUST00000027797Nvl11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
nuclear VCP-like [Source:MGI Symbol;Acc:MGI:1914709]
ENSMUSG00000026523ENSMUST00000097457Wdr6411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
WD repeat domain 64 [Source:MGI Symbol;Acc:MGI:1923070]
ENSMUSG00000026523ENSMUST00000171939Wdr6411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
WD repeat domain 64 [Source:MGI Symbol;Acc:MGI:1923070]
ENSMUSG00000026546ENSMUST00000085894Ccdc1911ForwardView as cDNA map |
View as Table
Internal |
Ensembl
coiled-coil domain containing 19 [Source:MGI Symbol;Acc:MGI:1919120]
ENSMUSG00000026553ENSMUST00000027833Copa11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
coatomer protein complex subunit alpha [Source:MGI Symbol;Acc:MGI:1334462]
ENSMUSG00000026553ENSMUST00000074152Copa11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
coatomer protein complex subunit alpha [Source:MGI Symbol;Acc:MGI:1334462]
ENSMUSG00000026553ENSMUST00000135192Copa11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
coatomer protein complex subunit alpha [Source:MGI Symbol;Acc:MGI:1334462]
ENSMUSG00000026553ENSMUST00000172129Copa11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
coatomer protein complex subunit alpha [Source:MGI Symbol;Acc:MGI:1334462]
ENSMUSG00000026556ENSMUST00000027837Vangl211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
vang-like 2 (van gogh, Drosophila) [Source:MGI Symbol;Acc:MGI:2135272]
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GUI created by the Computational Medicine Center at the Sidney Kimmel Medical College of Thomas Jefferson University
We gratefully acknowledge support of this work by the William M. Keck Foundation