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Genome: Mus Musculus | mRNA | miRBase 18 (Nov. 2011), ENSEMBL 65 (Dec. 2011) and RNA22v2.0
Description: List of transcripts that are targeted by all of the below miRNA identifiers simultaneously
miRNA's: mmu-miR-380-3p (MIMAT0000745)
Filtering By: Base pair min value: 12 | Folding energy max value (Kcal/mol): -12 | Min miRNA targets: 1 | Max p-value: .1


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Gene IDTranscript IDCommon Gene Name# of miRNA targets
for specified miRNAs
ChromosomeStrand DirectionTranscript Link to view miRNA target predictionsGene LinkDescription
ENSMUSG00000004364ENSMUST00000163119Cul311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cullin 3 [Source:MGI Symbol;Acc:MGI:1347360]
ENSMUSG00000004364ENSMUST00000164108Cul311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cullin 3 [Source:MGI Symbol;Acc:MGI:1347360]
ENSMUSG00000004707ENSMUST00000068878Ly911ReverseView as cDNA map |
View as Table
Internal |
Ensembl
lymphocyte antigen 9 [Source:MGI Symbol;Acc:MGI:96885]
ENSMUSG00000005338ENSMUST00000111220Cadm321ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cell adhesion molecule 3 [Source:MGI Symbol;Acc:MGI:2137858]
ENSMUSG00000005501ENSMUST00000113153Usp4011ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ubiquitin specific peptidase 40 [Source:MGI Symbol;Acc:MGI:2443184]
ENSMUSG00000005763ENSMUST00000161971Cd24711ForwardView as cDNA map |
View as Table
Internal |
Ensembl
CD247 antigen [Source:MGI Symbol;Acc:MGI:88334]
ENSMUSG00000006411ENSMUST00000006578Pvrl411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
poliovirus receptor-related 4 [Source:MGI Symbol;Acc:MGI:1918990]
ENSMUSG00000006411ENSMUST00000111286Pvrl411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
poliovirus receptor-related 4 [Source:MGI Symbol;Acc:MGI:1918990]
ENSMUSG00000006542ENSMUST00000081636Prkag311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
protein kinase, AMP-activated, gamma 3 non-catatlytic subunit [Source:MGI Symbol;Acc:MGI:1891343]
ENSMUSG00000006542ENSMUST00000160732Prkag311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
protein kinase, AMP-activated, gamma 3 non-catatlytic subunit [Source:MGI Symbol;Acc:MGI:1891343]
ENSMUSG00000007097ENSMUST00000085913Atp1a211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ATPase, Na+/K+ transporting, alpha 2 polypeptide [Source:MGI Symbol;Acc:MGI:88106]
ENSMUSG00000009905ENSMUST00000010049Kdsr11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
3-ketodihydrosphingosine reductase [Source:MGI Symbol;Acc:MGI:1918000]
ENSMUSG00000016493ENSMUST00000162650Cd4611ReverseView as cDNA map |
View as Table
Internal |
Ensembl
CD46 antigen, complement regulatory protein [Source:MGI Symbol;Acc:MGI:1203290]
ENSMUSG00000016918ENSMUST00000088585Sulf121ForwardView as cDNA map |
View as Table
Internal |
Ensembl
sulfatase 1 [Source:MGI Symbol;Acc:MGI:2138563]
ENSMUSG00000018199ENSMUST00000159879Trove211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
TROVE domain family, member 2 [Source:MGI Symbol;Acc:MGI:106652]
ENSMUSG00000022591ENSMUST00000023262Gm974721ForwardView as cDNA map |
View as Table
Internal |
Ensembl
predicted gene 9747 [Source:MGI Symbol;Acc:MGI:3710571]
ENSMUSG00000023150ENSMUST00000023918Ivns1abp11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
influenza virus NS1A binding protein [Source:MGI Symbol;Acc:MGI:2152389]
ENSMUSG00000023150ENSMUST00000097543Ivns1abp11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
influenza virus NS1A binding protein [Source:MGI Symbol;Acc:MGI:2152389]
ENSMUSG00000025900ENSMUST00000027032Rp111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
retinitis pigmentosa 1 (human) [Source:MGI Symbol;Acc:MGI:1341105]
ENSMUSG00000025900ENSMUST00000115540Rp111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
retinitis pigmentosa 1 (human) [Source:MGI Symbol;Acc:MGI:1341105]
ENSMUSG00000025905ENSMUST00000027038Oprk111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
opioid receptor, kappa 1 [Source:MGI Symbol;Acc:MGI:97439]
ENSMUSG00000025905ENSMUST00000160339Oprk111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
opioid receptor, kappa 1 [Source:MGI Symbol;Acc:MGI:97439]
ENSMUSG00000025905ENSMUST00000160777Oprk121ForwardView as cDNA map |
View as Table
Internal |
Ensembl
opioid receptor, kappa 1 [Source:MGI Symbol;Acc:MGI:97439]
ENSMUSG00000025912ENSMUST00000088658Mybl111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
myeloblastosis oncogene-like 1 [Source:MGI Symbol;Acc:MGI:99925]
ENSMUSG00000025917ENSMUST00000027050Cops511ReverseView as cDNA map |
View as Table
Internal |
Ensembl
COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana) [Source:MGI Symbol;Acc:MGI:1349415]
ENSMUSG00000025929ENSMUST00000027061Il17a11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
interleukin 17A [Source:MGI Symbol;Acc:MGI:107364]
ENSMUSG00000025931ENSMUST00000068880Paqr821ForwardView as cDNA map |
View as Table
Internal |
Ensembl
progestin and adipoQ receptor family member VIII [Source:MGI Symbol;Acc:MGI:1921479]
ENSMUSG00000025931ENSMUST00000167119Paqr811ForwardView as cDNA map |
View as Table
Internal |
Ensembl
progestin and adipoQ receptor family member VIII [Source:MGI Symbol;Acc:MGI:1921479]
ENSMUSG00000025931ENSMUST00000172139Paqr811ForwardView as cDNA map |
View as Table
Internal |
Ensembl
progestin and adipoQ receptor family member VIII [Source:MGI Symbol;Acc:MGI:1921479]
ENSMUSG00000025932ENSMUST00000027066Eya111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
eyes absent 1 homolog (Drosophila) [Source:MGI Symbol;Acc:MGI:109344]
ENSMUSG00000025932ENSMUST00000080664Eya111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
eyes absent 1 homolog (Drosophila) [Source:MGI Symbol;Acc:MGI:109344]
ENSMUSG00000025956ENSMUST00000053469Mettl21a11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
methyltransferase like 21A [Source:MGI Symbol;Acc:MGI:1914349]
ENSMUSG00000025956ENSMUST00000114079Mettl21a11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
methyltransferase like 21A [Source:MGI Symbol;Acc:MGI:1914349]
ENSMUSG00000025958ENSMUST00000049932Creb111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cAMP responsive element binding protein 1 [Source:MGI Symbol;Acc:MGI:88494]
ENSMUSG00000025958ENSMUST00000087366Creb111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cAMP responsive element binding protein 1 [Source:MGI Symbol;Acc:MGI:88494]
ENSMUSG00000025958ENSMUST00000171164Creb111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cAMP responsive element binding protein 1 [Source:MGI Symbol;Acc:MGI:88494]
ENSMUSG00000025959ENSMUST00000114086Klf711ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Kruppel-like factor 7 (ubiquitous) [Source:MGI Symbol;Acc:MGI:1935151]
ENSMUSG00000025995ENSMUST00000027139Wdr7511ForwardView as cDNA map |
View as Table
Internal |
Ensembl
WD repeat domain 75 [Source:MGI Symbol;Acc:MGI:1920924]
ENSMUSG00000025995ENSMUST00000169703Wdr7511ForwardView as cDNA map |
View as Table
Internal |
Ensembl
WD repeat domain 75 [Source:MGI Symbol;Acc:MGI:1920924]
ENSMUSG00000025997ENSMUST00000027146Ikzf221ReverseView as cDNA map |
View as Table
Internal |
Ensembl
IKAROS family zinc finger 2 [Source:MGI Symbol;Acc:MGI:1342541]
ENSMUSG00000026000ENSMUST00000027149Lancl121ReverseView as cDNA map |
View as Table
Internal |
Ensembl
LanC (bacterial lantibiotic synthetase component C)-like 1 [Source:MGI Symbol;Acc:MGI:1336997]
ENSMUSG00000026000ENSMUST00000113979Lancl121ReverseView as cDNA map |
View as Table
Internal |
Ensembl
LanC (bacterial lantibiotic synthetase component C)-like 1 [Source:MGI Symbol;Acc:MGI:1336997]
ENSMUSG00000026018ENSMUST00000027172Ica1l21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
islet cell autoantigen 1-like [Source:MGI Symbol;Acc:MGI:1917625]
ENSMUSG00000026019ENSMUST00000027173Wdr1211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
WD repeat domain 12 [Source:MGI Symbol;Acc:MGI:1927241]
ENSMUSG00000026019ENSMUST00000117438Wdr1211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
WD repeat domain 12 [Source:MGI Symbol;Acc:MGI:1927241]
ENSMUSG00000026019ENSMUST00000122038Wdr1211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
WD repeat domain 12 [Source:MGI Symbol;Acc:MGI:1927241]
ENSMUSG00000026039ENSMUST00000027202Sgol211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
shugoshin-like 2 (S. pombe) [Source:MGI Symbol;Acc:MGI:1098767]
ENSMUSG00000026065ENSMUST00000027233Slc9a411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 9 (sodium/hydrogen exchanger), member 4 [Source:MGI Symbol;Acc:MGI:105074]
ENSMUSG00000026110ENSMUST00000042161Mgat4a11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
mannoside acetylglucosaminyltransferase 4, isoenzyme A [Source:MGI Symbol;Acc:MGI:2662992]
ENSMUSG00000026110ENSMUST00000151952Mgat4a11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
mannoside acetylglucosaminyltransferase 4, isoenzyme A [Source:MGI Symbol;Acc:MGI:2662992]
ENSMUSG00000026112ENSMUST000000272866330578E17Rik21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA 6330578E17 gene [Source:MGI Symbol;Acc:MGI:1923428]
ENSMUSG00000026113ENSMUST00000168546Inpp4a11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
inositol polyphosphate-4-phosphatase, type I [Source:MGI Symbol;Acc:MGI:1931123]
ENSMUSG00000026131ENSMUST00000097785Dst21ForwardView as cDNA map |
View as Table
Internal |
Ensembl
dystonin [Source:MGI Symbol;Acc:MGI:104627]
ENSMUSG00000026131ENSMUST00000097786Dst21ForwardView as cDNA map |
View as Table
Internal |
Ensembl
dystonin [Source:MGI Symbol;Acc:MGI:104627]
ENSMUSG00000026155ENSMUST00000027339Smap111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
stromal membrane-associated protein 1 [Source:MGI Symbol;Acc:MGI:2138261]
ENSMUSG00000026159ENSMUST00000113444Agfg111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
ArfGAP with FG repeats 1 [Source:MGI Symbol;Acc:MGI:1333754]
ENSMUSG00000026174ENSMUST00000087215Rqcd111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
rcd1 (required for cell differentiation) homolog 1 (S. pombe) [Source:MGI Symbol;Acc:MGI:1928902]
ENSMUSG00000026175ENSMUST00000027366Vil121ForwardView as cDNA map |
View as Table
Internal |
Ensembl
villin 1 [Source:MGI Symbol;Acc:MGI:98930]
ENSMUSG00000026196ENSMUST00000027393Bard121ReverseView as cDNA map |
View as Table
Internal |
Ensembl
BRCA1 associated RING domain 1 [Source:MGI Symbol;Acc:MGI:1328361]
ENSMUSG00000026204ENSMUST00000027404Ptprn11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
protein tyrosine phosphatase, receptor type, N [Source:MGI Symbol;Acc:MGI:102765]
ENSMUSG00000026204ENSMUST00000164451Ptprn11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
protein tyrosine phosphatase, receptor type, N [Source:MGI Symbol;Acc:MGI:102765]
ENSMUSG00000026238ENSMUST00000045897Ptma11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
ENSMUSG00000026240ENSMUST00000027446Cops7b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
COP9 (constitutive photomorphogenic) homolog, subunit 7b (Arabidopsis thaliana) [Source:MGI Symbol;Acc:MGI:1349388]
ENSMUSG00000026240ENSMUST00000121534Cops7b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
COP9 (constitutive photomorphogenic) homolog, subunit 7b (Arabidopsis thaliana) [Source:MGI Symbol;Acc:MGI:1349388]
ENSMUSG00000026246ENSMUST00000027455Alppl221ReverseView as cDNA map |
View as Table
Internal |
Ensembl
alkaline phosphatase, placental-like 2 [Source:MGI Symbol;Acc:MGI:108009]
ENSMUSG00000026273ENSMUST00000027492Mterfd211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
MTERF domain containing 2 [Source:MGI Symbol;Acc:MGI:1918355]
ENSMUSG00000026274ENSMUST00000027493Pask11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
PAS domain containing serine/threonine kinase [Source:MGI Symbol;Acc:MGI:2155936]
ENSMUSG00000026288ENSMUST00000042275Inpp5d21ForwardView as cDNA map |
View as Table
Internal |
Ensembl
inositol polyphosphate-5-phosphatase D [Source:MGI Symbol;Acc:MGI:107357]
ENSMUSG00000026288ENSMUST00000072999Inpp5d11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
inositol polyphosphate-5-phosphatase D [Source:MGI Symbol;Acc:MGI:107357]
ENSMUSG00000026288ENSMUST00000168783Inpp5d11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
inositol polyphosphate-5-phosphatase D [Source:MGI Symbol;Acc:MGI:107357]
ENSMUSG00000026288ENSMUST00000169754Inpp5d21ForwardView as cDNA map |
View as Table
Internal |
Ensembl
inositol polyphosphate-5-phosphatase D [Source:MGI Symbol;Acc:MGI:107357]
ENSMUSG00000026288ENSMUST00000170300Inpp5d11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
inositol polyphosphate-5-phosphatase D [Source:MGI Symbol;Acc:MGI:107357]
ENSMUSG00000026312ENSMUST00000027542Cdh731ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cadherin 7, type 2 [Source:MGI Symbol;Acc:MGI:2442792]
ENSMUSG00000026312ENSMUST00000086681Cdh711ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cadherin 7, type 2 [Source:MGI Symbol;Acc:MGI:2442792]
ENSMUSG00000026312ENSMUST00000112701Cdh731ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cadherin 7, type 2 [Source:MGI Symbol;Acc:MGI:2442792]
ENSMUSG00000026312ENSMUST00000172005Cdh731ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cadherin 7, type 2 [Source:MGI Symbol;Acc:MGI:2442792]
ENSMUSG00000026321ENSMUST00000027559Tnfrsf11a11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
tumor necrosis factor receptor superfamily, member 11a [Source:MGI Symbol;Acc:MGI:1314891]
ENSMUSG00000026356ENSMUST00000064309Dars11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
aspartyl-tRNA synthetase [Source:MGI Symbol;Acc:MGI:2442544]
ENSMUSG00000026357ENSMUST00000027603Rgs1811ReverseView as cDNA map |
View as Table
Internal |
Ensembl
regulator of G-protein signaling 18 [Source:MGI Symbol;Acc:MGI:1927498]
ENSMUSG00000026365ENSMUST00000066859Cfh11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
complement component factor h [Source:MGI Symbol;Acc:MGI:88385]
ENSMUSG00000026365ENSMUST00000111976Cfh11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
complement component factor h [Source:MGI Symbol;Acc:MGI:88385]
ENSMUSG00000026365ENSMUST00000111977Cfh11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
complement component factor h [Source:MGI Symbol;Acc:MGI:88385]
ENSMUSG00000026380ENSMUST00000027629Tcfcp2l111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
transcription factor CP2-like 1 [Source:MGI Symbol;Acc:MGI:2444691]
ENSMUSG00000026387ENSMUST00000097613Sctr11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
secretin receptor [Source:MGI Symbol;Acc:MGI:2441720]
ENSMUSG00000026390ENSMUST00000027639Marco11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
macrophage receptor with collagenous structure [Source:MGI Symbol;Acc:MGI:1309998]
ENSMUSG00000026393ENSMUST00000027642Nek711ReverseView as cDNA map |
View as Table
Internal |
Ensembl
NIMA (never in mitosis gene a)-related expressed kinase 7 [Source:MGI Symbol;Acc:MGI:1890645]
ENSMUSG00000026399ENSMUST00000027650Cd5511ReverseView as cDNA map |
View as Table
Internal |
Ensembl
CD55 antigen [Source:MGI Symbol;Acc:MGI:104850]
ENSMUSG00000026404ENSMUST00000027655Ddx5911ForwardView as cDNA map |
View as Table
Internal |
Ensembl
DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 [Source:MGI Symbol;Acc:MGI:1915247]
ENSMUSG00000026407ENSMUST00000112068Cacna1s11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
calcium channel, voltage-dependent, L type, alpha 1S subunit [Source:MGI Symbol;Acc:MGI:88294]
ENSMUSG00000026452ENSMUST00000121990Syt221ForwardView as cDNA map |
View as Table
Internal |
Ensembl
synaptotagmin II [Source:MGI Symbol;Acc:MGI:99666]
ENSMUSG00000026483ENSMUST00000148810Fam129a11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
family with sequence similarity 129, member A [Source:MGI Symbol;Acc:MGI:2137237]
ENSMUSG00000026484ENSMUST00000076110Rnf211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ring finger protein 2 [Source:MGI Symbol;Acc:MGI:1101759]
ENSMUSG00000026490ENSMUST00000097450Cdc42bpa11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
CDC42 binding protein kinase alpha [Source:MGI Symbol;Acc:MGI:2441841]
ENSMUSG00000026510ENSMUST00000117245Trp53bp211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
transformation related protein 53 binding protein 2 [Source:MGI Symbol;Acc:MGI:2138319]
ENSMUSG00000026519ENSMUST00000027800Tmem63a11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
transmembrane protein 63a [Source:MGI Symbol;Acc:MGI:2384789]
ENSMUSG00000026519ENSMUST00000161523Tmem63a11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
transmembrane protein 63a [Source:MGI Symbol;Acc:MGI:2384789]
ENSMUSG00000026519ENSMUST00000163894Tmem63a11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
transmembrane protein 63a [Source:MGI Symbol;Acc:MGI:2384789]
ENSMUSG00000026554ENSMUST00000074144Dcaf811ForwardView as cDNA map |
View as Table
Internal |
Ensembl
DDB1 and CUL4 associated factor 8 [Source:MGI Symbol;Acc:MGI:91860]
ENSMUSG00000026560ENSMUST00000027843Fmo911ReverseView as cDNA map |
View as Table
Internal |
Ensembl
flavin containing monooxygenase 9 [Source:MGI Symbol;Acc:MGI:3606068]
ENSMUSG00000026560ENSMUST00000148677Fmo911ReverseView as cDNA map |
View as Table
Internal |
Ensembl
flavin containing monooxygenase 9 [Source:MGI Symbol;Acc:MGI:3606068]
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We gratefully acknowledge support of this work by the William M. Keck Foundation