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Genome: Mus Musculus | mRNA | miRBase 18 (Nov. 2011), ENSEMBL 65 (Dec. 2011) and RNA22v2.0
Description: List of transcripts that are targeted by all of the below miRNA identifiers simultaneously
miRNA's: mmu-miR-410-3p (MIMAT0001091)
Filtering By: Base pair min value: 12 | Folding energy max value (Kcal/mol): -12 | Min miRNA targets: 1 | Max p-value: .1


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Gene IDTranscript IDCommon Gene Name# of miRNA targets
for specified miRNAs
ChromosomeStrand DirectionTranscript Link to view miRNA target predictionsGene LinkDescription
ENSMUSG00000001143ENSMUST00000115011Lman2l11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
lectin, mannose-binding 2-like [Source:MGI Symbol;Acc:MGI:2443010]
ENSMUSG00000001143ENSMUST00000125304Lman2l11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
lectin, mannose-binding 2-like [Source:MGI Symbol;Acc:MGI:2443010]
ENSMUSG00000003135ENSMUST00000003219D1Bwg0212e11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
DNA segment, Chr 1, Brigham & Women's Genetics 0212 expressed [Source:MGI Symbol;Acc:MGI:106580]
ENSMUSG00000003135ENSMUST00000161515D1Bwg0212e11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
DNA segment, Chr 1, Brigham & Women's Genetics 0212 expressed [Source:MGI Symbol;Acc:MGI:106580]
ENSMUSG00000006299ENSMUST00000006462Aamp11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
angio-associated migratory protein [Source:MGI Symbol;Acc:MGI:107809]
ENSMUSG00000009418ENSMUST00000040599Nav111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
neuron navigator 1 [Source:MGI Symbol;Acc:MGI:2183683]
ENSMUSG00000009905ENSMUST00000010049Kdsr11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
3-ketodihydrosphingosine reductase [Source:MGI Symbol;Acc:MGI:1918000]
ENSMUSG00000019699ENSMUST00000111159Akt311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
thymoma viral proto-oncogene 3 [Source:MGI Symbol;Acc:MGI:1345147]
ENSMUSG00000019699ENSMUST00000111160Akt311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
thymoma viral proto-oncogene 3 [Source:MGI Symbol;Acc:MGI:1345147]
ENSMUSG00000025774ENSMUST00000026876Crisp411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cysteine-rich secretory protein 4 [Source:MGI Symbol;Acc:MGI:1925331]
ENSMUSG00000025774ENSMUST00000115340Crisp411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cysteine-rich secretory protein 4 [Source:MGI Symbol;Acc:MGI:1925331]
ENSMUSG00000025935ENSMUST00000027068Tram111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
translocating chain-associating membrane protein 1 [Source:MGI Symbol;Acc:MGI:1919515]
ENSMUSG00000025971ENSMUST000000271149430016H08Rik11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA 9430016H08 gene [Source:MGI Symbol;Acc:MGI:1915365]
ENSMUSG00000026070ENSMUST00000097771Il18r111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
interleukin 18 receptor 1 [Source:MGI Symbol;Acc:MGI:105383]
ENSMUSG00000026070ENSMUST00000108044Il18r121ForwardView as cDNA map |
View as Table
Internal |
Ensembl
interleukin 18 receptor 1 [Source:MGI Symbol;Acc:MGI:105383]
ENSMUSG00000026080ENSMUST00000027249Chst1011ReverseView as cDNA map |
View as Table
Internal |
Ensembl
carbohydrate sulfotransferase 10 [Source:MGI Symbol;Acc:MGI:2138283]
ENSMUSG00000026103ENSMUST00000114510Gls11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
glutaminase [Source:MGI Symbol;Acc:MGI:95752]
ENSMUSG00000026174ENSMUST00000087215Rqcd111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
rcd1 (required for cell differentiation) homolog 1 (S. pombe) [Source:MGI Symbol;Acc:MGI:1928902]
ENSMUSG00000026196ENSMUST00000027393Bard111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
BRCA1 associated RING domain 1 [Source:MGI Symbol;Acc:MGI:1328361]
ENSMUSG00000026251ENSMUST00000073252Chrnd11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cholinergic receptor, nicotinic, delta polypeptide [Source:MGI Symbol;Acc:MGI:87893]
ENSMUSG00000026315ENSMUST00000000514Serpinb821ForwardView as cDNA map |
View as Table
Internal |
Ensembl
serine (or cysteine) peptidase inhibitor, clade B, member 8 [Source:MGI Symbol;Acc:MGI:894657]
ENSMUSG00000026315ENSMUST00000112706Serpinb821ForwardView as cDNA map |
View as Table
Internal |
Ensembl
serine (or cysteine) peptidase inhibitor, clade B, member 8 [Source:MGI Symbol;Acc:MGI:894657]
ENSMUSG00000026361ENSMUST00000018337Cdc7311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2384876]
ENSMUSG00000026380ENSMUST00000027629Tcfcp2l111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
transcription factor CP2-like 1 [Source:MGI Symbol;Acc:MGI:2444691]
ENSMUSG00000026395ENSMUST00000027645Ptprc11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
protein tyrosine phosphatase, receptor type, C [Source:MGI Symbol;Acc:MGI:97810]
ENSMUSG00000026395ENSMUST00000081416Ptprc11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
protein tyrosine phosphatase, receptor type, C [Source:MGI Symbol;Acc:MGI:97810]
ENSMUSG00000026395ENSMUST00000112036Ptprc11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
protein tyrosine phosphatase, receptor type, C [Source:MGI Symbol;Acc:MGI:97810]
ENSMUSG00000026395ENSMUST00000112038Ptprc11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
protein tyrosine phosphatase, receptor type, C [Source:MGI Symbol;Acc:MGI:97810]
ENSMUSG00000026399ENSMUST00000027650Cd5511ReverseView as cDNA map |
View as Table
Internal |
Ensembl
CD55 antigen [Source:MGI Symbol;Acc:MGI:104850]
ENSMUSG00000026409ENSMUST00000050406Pfkfb211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 [Source:MGI Symbol;Acc:MGI:107815]
ENSMUSG00000026409ENSMUST00000066863Pfkfb211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 [Source:MGI Symbol;Acc:MGI:107815]
ENSMUSG00000026409ENSMUST00000169659Pfkfb211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 [Source:MGI Symbol;Acc:MGI:107815]
ENSMUSG00000026523ENSMUST00000097457Wdr6411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
WD repeat domain 64 [Source:MGI Symbol;Acc:MGI:1923070]
ENSMUSG00000026523ENSMUST00000171939Wdr6411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
WD repeat domain 64 [Source:MGI Symbol;Acc:MGI:1923070]
ENSMUSG00000026532ENSMUST00000027817Spna111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
spectrin alpha 1 [Source:MGI Symbol;Acc:MGI:98385]
ENSMUSG00000026594ENSMUST00000063199Ralgps211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ral GEF with PH domain and SH3 binding motif 2 [Source:MGI Symbol;Acc:MGI:1925505]
ENSMUSG00000026594ENSMUST00000165172Ralgps211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ral GEF with PH domain and SH3 binding motif 2 [Source:MGI Symbol;Acc:MGI:1925505]
ENSMUSG00000026594ENSMUST00000171292Ralgps211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ral GEF with PH domain and SH3 binding motif 2 [Source:MGI Symbol;Acc:MGI:1925505]
ENSMUSG00000026600ENSMUST00000051396Soat111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
sterol O-acyltransferase 1 [Source:MGI Symbol;Acc:MGI:104665]
ENSMUSG00000026609ENSMUST00000027905Ush2a11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Usher syndrome 2A (autosomal recessive, mild) homolog (human) [Source:MGI Symbol;Acc:MGI:1341292]
ENSMUSG00000026609ENSMUST00000060479Ush2a11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Usher syndrome 2A (autosomal recessive, mild) homolog (human) [Source:MGI Symbol;Acc:MGI:1341292]
ENSMUSG00000026614ENSMUST00000061093Slc30a1011ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 30, member 10 [Source:MGI Symbol;Acc:MGI:2685058]
ENSMUSG00000026638ENSMUST00000076521Irf611ForwardView as cDNA map |
View as Table
Internal |
Ensembl
interferon regulatory factor 6 [Source:MGI Symbol;Acc:MGI:1859211]
ENSMUSG00000026640ENSMUST00000027952Plxna211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
plexin A2 [Source:MGI Symbol;Acc:MGI:107684]
ENSMUSG00000026697ENSMUST00000028020Myoc11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
myocilin [Source:MGI Symbol;Acc:MGI:1202864]
ENSMUSG00000028354ENSMUST00000030039Fmn211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
formin 2 [Source:MGI Symbol;Acc:MGI:1859252]
ENSMUSG00000028354ENSMUST00000165284Fmn211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
formin 2 [Source:MGI Symbol;Acc:MGI:1859252]
ENSMUSG00000037470ENSMUST00000046875Uggt111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
UDP-glucose glycoprotein glucosyltransferase 1 [Source:MGI Symbol;Acc:MGI:2443162]
ENSMUSG00000037503ENSMUST00000047534Fam168b11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
family with sequence similarity 168, member B [Source:MGI Symbol;Acc:MGI:2448487]
ENSMUSG00000037509ENSMUST00000047664Arhgef411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Rho guanine nucleotide exchange factor (GEF) 4 [Source:MGI Symbol;Acc:MGI:2442507]
ENSMUSG00000037568ENSMUST00000047409Vash211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
vasohibin 2 [Source:MGI Symbol;Acc:MGI:2444826]
ENSMUSG00000037995ENSMUST00000052629Igsf911ForwardView as cDNA map |
View as Table
Internal |
Ensembl
immunoglobulin superfamily, member 9 [Source:MGI Symbol;Acc:MGI:2135283]
ENSMUSG00000037995ENSMUST00000111235Igsf911ForwardView as cDNA map |
View as Table
Internal |
Ensembl
immunoglobulin superfamily, member 9 [Source:MGI Symbol;Acc:MGI:2135283]
ENSMUSG00000038174ENSMUST00000161600Fam126b11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
family with sequence similarity 126, member B [Source:MGI Symbol;Acc:MGI:1098784]
ENSMUSG00000038733ENSMUST00000111053Wdr2611ReverseView as cDNA map |
View as Table
Internal |
Ensembl
WD repeat domain 26 [Source:MGI Symbol;Acc:MGI:1923825]
ENSMUSG00000038733ENSMUST00000162819Wdr2611ReverseView as cDNA map |
View as Table
Internal |
Ensembl
WD repeat domain 26 [Source:MGI Symbol;Acc:MGI:1923825]
ENSMUSG00000040710ENSMUST00000043336St8sia411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 [Source:MGI Symbol;Acc:MGI:106018]
ENSMUSG00000040865ENSMUST00000097718Ino80d11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
INO80 complex subunit D [Source:MGI Symbol;Acc:MGI:3027003]
ENSMUSG00000040865ENSMUST00000165066Ino80d11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
INO80 complex subunit D [Source:MGI Symbol;Acc:MGI:3027003]
ENSMUSG00000040865ENSMUST00000172416Ino80d11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
INO80 complex subunit D [Source:MGI Symbol;Acc:MGI:3027003]
ENSMUSG00000040918ENSMUST00000044021Slc19a211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 19 (thiamine transporter), member 2 [Source:MGI Symbol;Acc:MGI:1928761]
ENSMUSG00000040918ENSMUST00000159230Slc19a211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 19 (thiamine transporter), member 2 [Source:MGI Symbol;Acc:MGI:1928761]
ENSMUSG00000041945ENSMUST00000039672Mfsd911ReverseView as cDNA map |
View as Table
Internal |
Ensembl
major facilitator superfamily domain containing 9 [Source:MGI Symbol;Acc:MGI:2443548]
ENSMUSG00000042197ENSMUST00000044455Zfp45121ReverseView as cDNA map |
View as Table
Internal |
Ensembl
zinc finger protein 451 [Source:MGI Symbol;Acc:MGI:2137896]
ENSMUSG00000042215ENSMUST00000044691Bag211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
BCL2-associated athanogene 2 [Source:MGI Symbol;Acc:MGI:1891254]
ENSMUSG00000042772ENSMUST00000073441Smg711ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans) [Source:MGI Symbol;Acc:MGI:2682334]
ENSMUSG00000042772ENSMUST00000111836Smg711ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans) [Source:MGI Symbol;Acc:MGI:2682334]
ENSMUSG00000042772ENSMUST00000164030Smg711ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans) [Source:MGI Symbol;Acc:MGI:2682334]
ENSMUSG00000050565ENSMUST00000060404Tor1aip211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
torsin A interacting protein 2 [Source:MGI Symbol;Acc:MGI:3582695]
ENSMUSG00000050565ENSMUST00000111757Tor1aip211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
torsin A interacting protein 2 [Source:MGI Symbol;Acc:MGI:3582695]
ENSMUSG00000052331ENSMUST00000044359Ankrd4411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ankyrin repeat domain 44 [Source:MGI Symbol;Acc:MGI:3045243]
ENSMUSG00000052534ENSMUST00000170399Pbx111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
pre B-cell leukemia transcription factor 1 [Source:MGI Symbol;Acc:MGI:97495]
ENSMUSG00000053024ENSMUST00000086521Cntn211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
contactin 2 [Source:MGI Symbol;Acc:MGI:104518]
ENSMUSG00000053963ENSMUST000001365216330403A02Rik11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA 6330403A02 gene [Source:MGI Symbol;Acc:MGI:2138735]
ENSMUSG00000055067ENSMUST00000128302Smyd311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
SET and MYND domain containing 3 [Source:MGI Symbol;Acc:MGI:1916976]
ENSMUSG00000055866ENSMUST00000069620Per211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
period homolog 2 (Drosophila) [Source:MGI Symbol;Acc:MGI:1195265]
ENSMUSG00000056708ENSMUST00000055322Ier511ReverseView as cDNA map |
View as Table
Internal |
Ensembl
immediate early response 5 [Source:MGI Symbol;Acc:MGI:1337072]
ENSMUSG00000057363ENSMUST00000126008Uxs111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
UDP-glucuronate decarboxylase 1 [Source:MGI Symbol;Acc:MGI:1915133]
ENSMUSG00000057464ENSMUST00000071521Olfr141511ReverseView as cDNA map |
View as Table
Internal |
Ensembl
olfactory receptor 1415 [Source:MGI Symbol;Acc:MGI:3031249]
ENSMUSG00000063681ENSMUST00000131586Crb111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
crumbs homolog 1 (Drosophila) [Source:MGI Symbol;Acc:MGI:2136343]
ENSMUSG00000067653ENSMUST00000045120Ankrd2311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ankyrin repeat domain 23 [Source:MGI Symbol;Acc:MGI:1925571]
ENSMUSG00000067653ENSMUST00000054665Ankrd2311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ankyrin repeat domain 23 [Source:MGI Symbol;Acc:MGI:1925571]
ENSMUSG00000070695ENSMUST00000043725Cntnap5a11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
contactin associated protein-like 5A [Source:MGI Symbol;Acc:MGI:3643623]
ENSMUSG00000073664ENSMUST00000035569Nbeal111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neurobeachin like 1 [Source:MGI Symbol;Acc:MGI:2444343]
ENSMUSG00000073664ENSMUST00000160834Nbeal121ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neurobeachin like 1 [Source:MGI Symbol;Acc:MGI:2444343]
ENSMUSG00000078284ENSMUST00000105081Cdc7311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2384876]
ENSMUSG00000079144ENSMUST00000069054A130010J15Rik11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA A130010J15 gene [Source:MGI Symbol;Acc:MGI:2441776]
ENSMUSG00000079144ENSMUST00000110831A130010J15Rik11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA A130010J15 gene [Source:MGI Symbol;Acc:MGI:2441776]
ENSMUSG00000079144ENSMUST00000160822A130010J15Rik11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA A130010J15 gene [Source:MGI Symbol;Acc:MGI:2441776]
ENSMUSG00000079144ENSMUST00000161235A130010J15Rik11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA A130010J15 gene [Source:MGI Symbol;Acc:MGI:2441776]
ENSMUSG00000001823ENSMUST00000001878Hoxd1212ForwardView as cDNA map |
View as Table
Internal |
Ensembl
homeobox D12 [Source:MGI Symbol;Acc:MGI:96204]
ENSMUSG00000001998ENSMUST00000002063Ap4e112ForwardView as cDNA map |
View as Table
Internal |
Ensembl
adaptor-related protein complex AP-4, epsilon 1 [Source:MGI Symbol;Acc:MGI:1336993]
ENSMUSG00000004105ENSMUST00000004208Angptl212ForwardView as cDNA map |
View as Table
Internal |
Ensembl
angiopoietin-like 2 [Source:MGI Symbol;Acc:MGI:1347002]
ENSMUSG00000004113ENSMUST00000070864Cacna1b12ReverseView as cDNA map |
View as Table
Internal |
Ensembl
calcium channel, voltage-dependent, N type, alpha 1B subunit [Source:MGI Symbol;Acc:MGI:88296]
ENSMUSG00000004113ENSMUST00000102939Cacna1b12ReverseView as cDNA map |
View as Table
Internal |
Ensembl
calcium channel, voltage-dependent, N type, alpha 1B subunit [Source:MGI Symbol;Acc:MGI:88296]
ENSMUSG00000005506ENSMUST00000068747Celf112ForwardView as cDNA map |
View as Table
Internal |
Ensembl
CUGBP, Elav-like family member 1 [Source:MGI Symbol;Acc:MGI:1342295]
ENSMUSG00000005506ENSMUST00000111452Celf112ForwardView as cDNA map |
View as Table
Internal |
Ensembl
CUGBP, Elav-like family member 1 [Source:MGI Symbol;Acc:MGI:1342295]
ENSMUSG00000014355ENSMUST00000014499Anapc112ReverseView as cDNA map |
View as Table
Internal |
Ensembl
anaphase promoting complex subunit 1 [Source:MGI Symbol;Acc:MGI:103097]
ENSMUSG00000015488ENSMUST000001140065930434B04Rik12ForwardView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA 5930434B04 gene [Source:MGI Symbol;Acc:MGI:1924317]
ENSMUSG00000015488ENSMUST000001140075930434B04Rik42ForwardView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA 5930434B04 gene [Source:MGI Symbol;Acc:MGI:1924317]
Please email us for questions and/or suggestions
GUI created by the Computational Medicine Center at the Sidney Kimmel Medical College of Thomas Jefferson University
We gratefully acknowledge support of this work by the William M. Keck Foundation