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Genome: Mus Musculus | mRNA | miRBase 18 (Nov. 2011), ENSEMBL 65 (Dec. 2011) and RNA22v2.0
Description: List of transcripts that are targeted by all of the below miRNA identifiers simultaneously
miRNA's: mmu-miR-216b-5p (MIMAT0003729)
Filtering By: Base pair min value: 12 | Folding energy max value (Kcal/mol): -12 | Min miRNA targets: 1 | Max p-value: .1


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Gene IDTranscript IDCommon Gene Name# of miRNA targets
for specified miRNAs
ChromosomeStrand DirectionTranscript Link to view miRNA target predictionsGene LinkDescription
ENSMUSG00000004707ENSMUST00000068878Ly911ReverseView as cDNA map |
View as Table
Internal |
Ensembl
lymphocyte antigen 9 [Source:MGI Symbol;Acc:MGI:96885]
ENSMUSG00000006005ENSMUST00000064506Tpr11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
translocated promoter region [Source:MGI Symbol;Acc:MGI:1922066]
ENSMUSG00000006005ENSMUST00000119161Tpr11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
translocated promoter region [Source:MGI Symbol;Acc:MGI:1922066]
ENSMUSG00000006411ENSMUST00000006578Pvrl411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
poliovirus receptor-related 4 [Source:MGI Symbol;Acc:MGI:1918990]
ENSMUSG00000006411ENSMUST00000111286Pvrl411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
poliovirus receptor-related 4 [Source:MGI Symbol;Acc:MGI:1918990]
ENSMUSG00000007107ENSMUST00000111243Atp1a411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ATPase, Na+/K+ transporting, alpha 4 polypeptide [Source:MGI Symbol;Acc:MGI:1351335]
ENSMUSG00000015316ENSMUST00000015460Slamf111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
signaling lymphocytic activation molecule family member 1 [Source:MGI Symbol;Acc:MGI:1351314]
ENSMUSG00000015484ENSMUST00000015628Fam163a21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
family with sequence similarity 163, member A [Source:MGI Symbol;Acc:MGI:3618859]
ENSMUSG00000016194ENSMUST00000016338Hsd11b111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
hydroxysteroid 11-beta dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:103562]
ENSMUSG00000025902ENSMUST00000027035Sox1711ReverseView as cDNA map |
View as Table
Internal |
Ensembl
SRY-box containing gene 17 [Source:MGI Symbol;Acc:MGI:107543]
ENSMUSG00000025903ENSMUST00000027036Lypla111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
lysophospholipase 1 [Source:MGI Symbol;Acc:MGI:1344588]
ENSMUSG00000025907ENSMUST00000027040Rb1cc111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
RB1-inducible coiled-coil 1 [Source:MGI Symbol;Acc:MGI:1341850]
ENSMUSG00000025909ENSMUST00000132064Sntg111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
syntrophin, gamma 1 [Source:MGI Symbol;Acc:MGI:1918346]
ENSMUSG00000025909ENSMUST00000140295Sntg111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
syntrophin, gamma 1 [Source:MGI Symbol;Acc:MGI:1918346]
ENSMUSG00000025938ENSMUST00000171848Slco5a111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier organic anion transporter family, member 5A1 [Source:MGI Symbol;Acc:MGI:2443431]
ENSMUSG00000025959ENSMUST00000114086Klf711ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Kruppel-like factor 7 (ubiquitous) [Source:MGI Symbol;Acc:MGI:1935151]
ENSMUSG00000025962ENSMUST00000027103Fastkd211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
FAST kinase domains 2 [Source:MGI Symbol;Acc:MGI:1922869]
ENSMUSG00000025969ENSMUST00000027112Nrp211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neuropilin 2 [Source:MGI Symbol;Acc:MGI:1100492]
ENSMUSG00000025969ENSMUST00000063594Nrp211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neuropilin 2 [Source:MGI Symbol;Acc:MGI:1100492]
ENSMUSG00000025969ENSMUST00000075144Nrp211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neuropilin 2 [Source:MGI Symbol;Acc:MGI:1100492]
ENSMUSG00000025969ENSMUST00000102822Nrp211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neuropilin 2 [Source:MGI Symbol;Acc:MGI:1100492]
ENSMUSG00000025969ENSMUST00000114155Nrp211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neuropilin 2 [Source:MGI Symbol;Acc:MGI:1100492]
ENSMUSG00000025969ENSMUST00000114157Nrp211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neuropilin 2 [Source:MGI Symbol;Acc:MGI:1100492]
ENSMUSG00000025983ENSMUST00000027128Ccdc15011ForwardView as cDNA map |
View as Table
Internal |
Ensembl
coiled-coil domain containing 150 [Source:MGI Symbol;Acc:MGI:1925266]
ENSMUSG00000026064ENSMUST00000027232Ptp4a111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
protein tyrosine phosphatase 4a1 [Source:MGI Symbol;Acc:MGI:1277096]
ENSMUSG00000026080ENSMUST00000027249Chst1011ReverseView as cDNA map |
View as Table
Internal |
Ensembl
carbohydrate sulfotransferase 10 [Source:MGI Symbol;Acc:MGI:2138283]
ENSMUSG00000026131ENSMUST00000097785Dst31ForwardView as cDNA map |
View as Table
Internal |
Ensembl
dystonin [Source:MGI Symbol;Acc:MGI:104627]
ENSMUSG00000026131ENSMUST00000097786Dst31ForwardView as cDNA map |
View as Table
Internal |
Ensembl
dystonin [Source:MGI Symbol;Acc:MGI:104627]
ENSMUSG00000026204ENSMUST00000027404Ptprn11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
protein tyrosine phosphatase, receptor type, N [Source:MGI Symbol;Acc:MGI:102765]
ENSMUSG00000026204ENSMUST00000164451Ptprn11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
protein tyrosine phosphatase, receptor type, N [Source:MGI Symbol;Acc:MGI:102765]
ENSMUSG00000026229ENSMUST00000027432Psmd111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 [Source:MGI Symbol;Acc:MGI:1917497]
ENSMUSG00000026238ENSMUST00000045897Ptma11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
ENSMUSG00000026245ENSMUST00000068333Farsb11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
phenylalanyl-tRNA synthetase, beta subunit [Source:MGI Symbol;Acc:MGI:1346035]
ENSMUSG00000026245ENSMUST00000170217Farsb11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
phenylalanyl-tRNA synthetase, beta subunit [Source:MGI Symbol;Acc:MGI:1346035]
ENSMUSG00000026272ENSMUST00000027491Agxt11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
alanine-glyoxylate aminotransferase [Source:MGI Symbol;Acc:MGI:1329033]
ENSMUSG00000026273ENSMUST00000027492Mterfd211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
MTERF domain containing 2 [Source:MGI Symbol;Acc:MGI:1918355]
ENSMUSG00000026275ENSMUST00000027494Ppp1r711ForwardView as cDNA map |
View as Table
Internal |
Ensembl
protein phosphatase 1, regulatory (inhibitor) subunit 7 [Source:MGI Symbol;Acc:MGI:1913635]
ENSMUSG00000026277ENSMUST00000027498Stk2511ReverseView as cDNA map |
View as Table
Internal |
Ensembl
serine/threonine kinase 25 (yeast) [Source:MGI Symbol;Acc:MGI:1891699]
ENSMUSG00000026289ENSMUST00000027512Atg16l111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
autophagy-related 16-like 1 (yeast) [Source:MGI Symbol;Acc:MGI:1924290]
ENSMUSG00000026289ENSMUST00000113186Atg16l111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
autophagy-related 16-like 1 (yeast) [Source:MGI Symbol;Acc:MGI:1924290]
ENSMUSG00000026339ENSMUST00000036025Ccdc9321ForwardView as cDNA map |
View as Table
Internal |
Ensembl
coiled-coil domain containing 93 [Source:MGI Symbol;Acc:MGI:1918079]
ENSMUSG00000026353ENSMUST00000027592Ubxn411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
UBX domain protein 4 [Source:MGI Symbol;Acc:MGI:1915062]
ENSMUSG00000026357ENSMUST00000027603Rgs1811ReverseView as cDNA map |
View as Table
Internal |
Ensembl
regulator of G-protein signaling 18 [Source:MGI Symbol;Acc:MGI:1927498]
ENSMUSG00000026365ENSMUST00000066859Cfh11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
complement component factor h [Source:MGI Symbol;Acc:MGI:88385]
ENSMUSG00000026365ENSMUST00000111976Cfh11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
complement component factor h [Source:MGI Symbol;Acc:MGI:88385]
ENSMUSG00000026365ENSMUST00000111977Cfh11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
complement component factor h [Source:MGI Symbol;Acc:MGI:88385]
ENSMUSG00000026387ENSMUST00000097613Sctr11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
secretin receptor [Source:MGI Symbol;Acc:MGI:2441720]
ENSMUSG00000026414ENSMUST00000112086Tnnt211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
troponin T2, cardiac [Source:MGI Symbol;Acc:MGI:104597]
ENSMUSG00000026414ENSMUST00000112087Tnnt211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
troponin T2, cardiac [Source:MGI Symbol;Acc:MGI:104597]
ENSMUSG00000026432ENSMUST00000027690Avpr1b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
arginine vasopressin receptor 1B [Source:MGI Symbol;Acc:MGI:1347010]
ENSMUSG00000026434ENSMUST00000062264Nucks121ForwardView as cDNA map |
View as Table
Internal |
Ensembl
nuclear casein kinase and cyclin-dependent kinase substrate 1 [Source:MGI Symbol;Acc:MGI:1934811]
ENSMUSG00000026439ENSMUST00000027700Rbbp511ForwardView as cDNA map |
View as Table
Internal |
Ensembl
retinoblastoma binding protein 5 [Source:MGI Symbol;Acc:MGI:1918367]
ENSMUSG00000026469ENSMUST00000027741Xpr111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
xenotropic and polytropic retrovirus receptor 1 [Source:MGI Symbol;Acc:MGI:97932]
ENSMUSG00000026484ENSMUST00000076110Rnf211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ring finger protein 2 [Source:MGI Symbol;Acc:MGI:1101759]
ENSMUSG00000026490ENSMUST00000111116Cdc42bpa11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
CDC42 binding protein kinase alpha [Source:MGI Symbol;Acc:MGI:2441841]
ENSMUSG00000026491ENSMUST00000140489Ahctf111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
AT hook containing transcription factor 1 [Source:MGI Symbol;Acc:MGI:1915033]
ENSMUSG00000026509ENSMUST00000068505Capn211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
calpain 2 [Source:MGI Symbol;Acc:MGI:88264]
ENSMUSG00000026542ENSMUST00000027824Apcs11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
serum amyloid P-component [Source:MGI Symbol;Acc:MGI:98229]
ENSMUSG00000026565ENSMUST00000160260Pou2f121ReverseView as cDNA map |
View as Table
Internal |
Ensembl
POU domain, class 2, transcription factor 1 [Source:MGI Symbol;Acc:MGI:101898]
ENSMUSG00000026586ENSMUST00000174397Prrx111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
paired related homeobox 1 [Source:MGI Symbol;Acc:MGI:97712]
ENSMUSG00000026609ENSMUST00000027905Ush2a11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Usher syndrome 2A (autosomal recessive, mild) homolog (human) [Source:MGI Symbol;Acc:MGI:1341292]
ENSMUSG00000026609ENSMUST00000060479Ush2a11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Usher syndrome 2A (autosomal recessive, mild) homolog (human) [Source:MGI Symbol;Acc:MGI:1341292]
ENSMUSG00000026617ENSMUST00000027916Bpnt111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
bisphosphate 3'-nucleotidase 1 [Source:MGI Symbol;Acc:MGI:1338800]
ENSMUSG00000026640ENSMUST00000027952Plxna211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
plexin A2 [Source:MGI Symbol;Acc:MGI:107684]
ENSMUSG00000026674ENSMUST00000170800Ddr211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
discoidin domain receptor family, member 2 [Source:MGI Symbol;Acc:MGI:1345277]
ENSMUSG00000026705ENSMUST00000117467Klhl2011ReverseView as cDNA map |
View as Table
Internal |
Ensembl
kelch-like 20 (Drosophila) [Source:MGI Symbol;Acc:MGI:2444855]
ENSMUSG00000026721ENSMUST00000028049Rabgap1l21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
RAB GTPase activating protein 1-like [Source:MGI Symbol;Acc:MGI:1352507]
ENSMUSG00000026725ENSMUST00000039178Tnn11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
tenascin N [Source:MGI Symbol;Acc:MGI:2665790]
ENSMUSG00000027520ENSMUST00000029025Zdbf211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
zinc finger, DBF-type containing 2 [Source:MGI Symbol;Acc:MGI:1921134]
ENSMUSG00000027520ENSMUST00000114132Zdbf211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
zinc finger, DBF-type containing 2 [Source:MGI Symbol;Acc:MGI:1921134]
ENSMUSG00000033740ENSMUST00000043578St1811ForwardView as cDNA map |
View as Table
Internal |
Ensembl
suppression of tumorigenicity 18 [Source:MGI Symbol;Acc:MGI:2446700]
ENSMUSG00000033740ENSMUST00000131494St1811ForwardView as cDNA map |
View as Table
Internal |
Ensembl
suppression of tumorigenicity 18 [Source:MGI Symbol;Acc:MGI:2446700]
ENSMUSG00000033740ENSMUST00000140079St1811ForwardView as cDNA map |
View as Table
Internal |
Ensembl
suppression of tumorigenicity 18 [Source:MGI Symbol;Acc:MGI:2446700]
ENSMUSG00000033740ENSMUST00000150761St1811ForwardView as cDNA map |
View as Table
Internal |
Ensembl
suppression of tumorigenicity 18 [Source:MGI Symbol;Acc:MGI:2446700]
ENSMUSG00000033740ENSMUST00000163727St1811ForwardView as cDNA map |
View as Table
Internal |
Ensembl
suppression of tumorigenicity 18 [Source:MGI Symbol;Acc:MGI:2446700]
ENSMUSG00000036707ENSMUST00000082149Cab3911ForwardView as cDNA map |
View as Table
Internal |
Ensembl
calcium binding protein 39 [Source:MGI Symbol;Acc:MGI:107438]
ENSMUSG00000036707ENSMUST00000097666Cab3911ForwardView as cDNA map |
View as Table
Internal |
Ensembl
calcium binding protein 39 [Source:MGI Symbol;Acc:MGI:107438]
ENSMUSG00000036707ENSMUST00000113360Cab3911ForwardView as cDNA map |
View as Table
Internal |
Ensembl
calcium binding protein 39 [Source:MGI Symbol;Acc:MGI:107438]
ENSMUSG00000037509ENSMUST00000159747Arhgef411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Rho guanine nucleotide exchange factor (GEF) 4 [Source:MGI Symbol;Acc:MGI:2442507]
ENSMUSG00000038174ENSMUST00000161600Fam126b11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
family with sequence similarity 126, member B [Source:MGI Symbol;Acc:MGI:1098784]
ENSMUSG00000038209ENSMUST00000043094Itln111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
intelectin 1 (galactofuranose binding) [Source:MGI Symbol;Acc:MGI:1333831]
ENSMUSG00000038305ENSMUST00000041978Spats2l11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
spermatogenesis associated, serine-rich 2-like [Source:MGI Symbol;Acc:MGI:1914448]
ENSMUSG00000038305ENSMUST00000167085Spats2l11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
spermatogenesis associated, serine-rich 2-like [Source:MGI Symbol;Acc:MGI:1914448]
ENSMUSG00000038349ENSMUST00000097735Plcl111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
phospholipase C-like 1 [Source:MGI Symbol;Acc:MGI:3036262]
ENSMUSG00000038608ENSMUST00000057520Dock1011ReverseView as cDNA map |
View as Table
Internal |
Ensembl
dedicator of cytokinesis 10 [Source:MGI Symbol;Acc:MGI:2146320]
ENSMUSG00000039342ENSMUST00000053499Ankar11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ankyrin and armadillo repeat containing [Source:MGI Symbol;Acc:MGI:2442559]
ENSMUSG00000040423ENSMUST00000161609Rc3h111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
RING CCCH (C3H) domains 1 [Source:MGI Symbol;Acc:MGI:2685397]
ENSMUSG00000040485ENSMUST00000036643Lrrc5211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
leucine rich repeat containing 52 [Source:MGI Symbol;Acc:MGI:1924118]
ENSMUSG00000040612ENSMUST00000038620Ildr211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
immunoglobulin-like domain containing receptor 2 [Source:MGI Symbol;Acc:MGI:1196370]
ENSMUSG00000040612ENSMUST00000111416Ildr211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
immunoglobulin-like domain containing receptor 2 [Source:MGI Symbol;Acc:MGI:1196370]
ENSMUSG00000040612ENSMUST00000168893Ildr211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
immunoglobulin-like domain containing receptor 2 [Source:MGI Symbol;Acc:MGI:1196370]
ENSMUSG00000041040ENSMUST00000036540Fam117b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
family with sequence similarity 117, member B [Source:MGI Symbol;Acc:MGI:1920000]
ENSMUSG00000041684ENSMUST00000114709Bivm11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
basic, immunoglobulin-like variable motif containing [Source:MGI Symbol;Acc:MGI:2179809]
ENSMUSG00000041763ENSMUST00000087933Tpp211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
tripeptidyl peptidase II [Source:MGI Symbol;Acc:MGI:102724]
ENSMUSG00000043282ENSMUST00000055314Gm553111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
predicted gene 5531 [Source:MGI Symbol;Acc:MGI:3646829]
ENSMUSG00000044340ENSMUST00000061047Phlpp111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
PH domain and leucine rich repeat protein phosphatase 1 [Source:MGI Symbol;Acc:MGI:2138327]
ENSMUSG00000045336ENSMUST00000062085Hsfy211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
heat shock transcription factor, Y linked 2 [Source:MGI Symbol;Acc:MGI:1918316]
ENSMUSG00000048096ENSMUST00000059352Lmod111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
leiomodin 1 (smooth muscle) [Source:MGI Symbol;Acc:MGI:2135671]
ENSMUSG00000048960ENSMUST00000027056Prex211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 [Source:MGI Symbol;Acc:MGI:1923385]
ENSMUSG00000049439ENSMUST00000060608Cyp20a111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cytochrome P450, family 20, subfamily A, polypeptide 1 [Source:MGI Symbol;Acc:MGI:1925201]
Please email us for questions and/or suggestions
GUI created by the Computational Medicine Center at the Sidney Kimmel Medical College of Thomas Jefferson University
We gratefully acknowledge support of this work by the William M. Keck Foundation