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Genome: Mus Musculus | mRNA | miRBase 18 (Nov. 2011), ENSEMBL 65 (Dec. 2011) and RNA22v2.0
Description: List of transcripts that are targeted by all of the below miRNA identifiers simultaneously
miRNA's: mmu-miR-154-3p (MIMAT0004537)
Filtering By: Base pair min value: 12 | Folding energy max value (Kcal/mol): -12 | Min miRNA targets: 1 | Max p-value: .1


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Gene IDTranscript IDCommon Gene Name# of miRNA targets
for specified miRNAs
ChromosomeStrand DirectionTranscript Link to view miRNA target predictionsGene LinkDescription
ENSMUSG00000004031ENSMUST00000004133Fam5b11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
family with sequence similarity 5, member B [Source:MGI Symbol;Acc:MGI:2443333]
ENSMUSG00000009907ENSMUST00000094646Vps4b11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
vacuolar protein sorting 4b (yeast) [Source:MGI Symbol;Acc:MGI:1100499]
ENSMUSG00000010311ENSMUST00000010455Optc11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
opticin [Source:MGI Symbol;Acc:MGI:2151113]
ENSMUSG00000010311ENSMUST00000124051Optc11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
opticin [Source:MGI Symbol;Acc:MGI:2151113]
ENSMUSG00000010311ENSMUST00000126123Optc11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
opticin [Source:MGI Symbol;Acc:MGI:2151113]
ENSMUSG00000015314ENSMUST00000171330Slamf611ForwardView as cDNA map |
View as Table
Internal |
Ensembl
SLAM family member 6 [Source:MGI Symbol;Acc:MGI:1353620]
ENSMUSG00000022591ENSMUST00000023262Gm974711ForwardView as cDNA map |
View as Table
Internal |
Ensembl
predicted gene 9747 [Source:MGI Symbol;Acc:MGI:3710571]
ENSMUSG00000025900ENSMUST00000027032Rp111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
retinitis pigmentosa 1 (human) [Source:MGI Symbol;Acc:MGI:1341105]
ENSMUSG00000025900ENSMUST00000115540Rp111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
retinitis pigmentosa 1 (human) [Source:MGI Symbol;Acc:MGI:1341105]
ENSMUSG00000025968ENSMUST00000168099Ndufs111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
NADH dehydrogenase (ubiquinone) Fe-S protein 1 [Source:MGI Symbol;Acc:MGI:2443241]
ENSMUSG00000025969ENSMUST00000027112Nrp211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neuropilin 2 [Source:MGI Symbol;Acc:MGI:1100492]
ENSMUSG00000025969ENSMUST00000063594Nrp211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neuropilin 2 [Source:MGI Symbol;Acc:MGI:1100492]
ENSMUSG00000025969ENSMUST00000075144Nrp211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neuropilin 2 [Source:MGI Symbol;Acc:MGI:1100492]
ENSMUSG00000025969ENSMUST00000102822Nrp211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neuropilin 2 [Source:MGI Symbol;Acc:MGI:1100492]
ENSMUSG00000025969ENSMUST00000114155Nrp211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neuropilin 2 [Source:MGI Symbol;Acc:MGI:1100492]
ENSMUSG00000025969ENSMUST00000114157Nrp211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neuropilin 2 [Source:MGI Symbol;Acc:MGI:1100492]
ENSMUSG00000025986ENSMUST00000027131Slc39a1011ReverseView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 39 (zinc transporter), member 10 [Source:MGI Symbol;Acc:MGI:1914515]
ENSMUSG00000026048ENSMUST00000027214Ercc511ForwardView as cDNA map |
View as Table
Internal |
Ensembl
excision repair cross-complementing rodent repair deficiency, complementation group 5 [Source:MGI Symbol;Acc:MGI:103582]
ENSMUSG00000026048ENSMUST00000166196Ercc511ForwardView as cDNA map |
View as Table
Internal |
Ensembl
excision repair cross-complementing rodent repair deficiency, complementation group 5 [Source:MGI Symbol;Acc:MGI:103582]
ENSMUSG00000026114ENSMUST00000027288Cnga311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cyclic nucleotide gated channel alpha 3 [Source:MGI Symbol;Acc:MGI:1341818]
ENSMUSG00000026134ENSMUST00000097795Prim211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
DNA primase, p58 subunit [Source:MGI Symbol;Acc:MGI:97758]
ENSMUSG00000026229ENSMUST00000027432Psmd111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 [Source:MGI Symbol;Acc:MGI:1917497]
ENSMUSG00000026246ENSMUST00000027455Alppl211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
alkaline phosphatase, placental-like 2 [Source:MGI Symbol;Acc:MGI:108009]
ENSMUSG00000026335ENSMUST00000058762Pam11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
peptidylglycine alpha-amidating monooxygenase [Source:MGI Symbol;Acc:MGI:97475]
ENSMUSG00000026335ENSMUST00000097625Pam11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
peptidylglycine alpha-amidating monooxygenase [Source:MGI Symbol;Acc:MGI:97475]
ENSMUSG00000026335ENSMUST00000161567Pam11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
peptidylglycine alpha-amidating monooxygenase [Source:MGI Symbol;Acc:MGI:97475]
ENSMUSG00000026335ENSMUST00000164496Pam11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
peptidylglycine alpha-amidating monooxygenase [Source:MGI Symbol;Acc:MGI:97475]
ENSMUSG00000026335ENSMUST00000167040Pam11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
peptidylglycine alpha-amidating monooxygenase [Source:MGI Symbol;Acc:MGI:97475]
ENSMUSG00000026342ENSMUST00000027580Slc35f511ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 35, member F5 [Source:MGI Symbol;Acc:MGI:1921400]
ENSMUSG00000026380ENSMUST00000027629Tcfcp2l111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
transcription factor CP2-like 1 [Source:MGI Symbol;Acc:MGI:2444691]
ENSMUSG00000026413ENSMUST00000027667Pkp121ReverseView as cDNA map |
View as Table
Internal |
Ensembl
plakophilin 1 [Source:MGI Symbol;Acc:MGI:1328359]
ENSMUSG00000026413ENSMUST00000163260Pkp121ReverseView as cDNA map |
View as Table
Internal |
Ensembl
plakophilin 1 [Source:MGI Symbol;Acc:MGI:1328359]
ENSMUSG00000026436ENSMUST00000086556Elk411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
ELK4, member of ETS oncogene family [Source:MGI Symbol;Acc:MGI:102853]
ENSMUSG00000026452ENSMUST00000121990Syt211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
synaptotagmin II [Source:MGI Symbol;Acc:MGI:99666]
ENSMUSG00000026479ENSMUST00000027753Lamc211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
laminin, gamma 2 [Source:MGI Symbol;Acc:MGI:99913]
ENSMUSG00000026479ENSMUST00000043090Lamc211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
laminin, gamma 2 [Source:MGI Symbol;Acc:MGI:99913]
ENSMUSG00000026490ENSMUST00000097450Cdc42bpa11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
CDC42 binding protein kinase alpha [Source:MGI Symbol;Acc:MGI:2441841]
ENSMUSG00000026514ENSMUST00000027795Cnih311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cornichon homolog 3 (Drosophila) [Source:MGI Symbol;Acc:MGI:1920228]
ENSMUSG00000026514ENSMUST00000161880Cnih311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cornichon homolog 3 (Drosophila) [Source:MGI Symbol;Acc:MGI:1920228]
ENSMUSG00000026565ENSMUST00000160260Pou2f111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
POU domain, class 2, transcription factor 1 [Source:MGI Symbol;Acc:MGI:101898]
ENSMUSG00000026586ENSMUST00000027878Prrx111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
paired related homeobox 1 [Source:MGI Symbol;Acc:MGI:97712]
ENSMUSG00000026586ENSMUST00000075805Prrx111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
paired related homeobox 1 [Source:MGI Symbol;Acc:MGI:97712]
ENSMUSG00000026609ENSMUST00000027905Ush2a11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Usher syndrome 2A (autosomal recessive, mild) homolog (human) [Source:MGI Symbol;Acc:MGI:1341292]
ENSMUSG00000026609ENSMUST00000060479Ush2a11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Usher syndrome 2A (autosomal recessive, mild) homolog (human) [Source:MGI Symbol;Acc:MGI:1341292]
ENSMUSG00000026617ENSMUST00000027916Bpnt111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
bisphosphate 3'-nucleotidase 1 [Source:MGI Symbol;Acc:MGI:1338800]
ENSMUSG00000026687ENSMUST00000028004Aldh9a111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
aldehyde dehydrogenase 9, subfamily A1 [Source:MGI Symbol;Acc:MGI:1861622]
ENSMUSG00000026694ENSMUST00000172292Mettl1311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
methyltransferase like 13 [Source:MGI Symbol;Acc:MGI:1918699]
ENSMUSG00000033793ENSMUST00000044369Atp6v1h11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
ATPase, H+ transporting, lysosomal V1 subunit H [Source:MGI Symbol;Acc:MGI:1914864]
ENSMUSG00000034088ENSMUST00000170883Hdlbp11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
high density lipoprotein (HDL) binding protein [Source:MGI Symbol;Acc:MGI:99256]
ENSMUSG00000037470ENSMUST00000046875Uggt111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
UDP-glucose glycoprotein glucosyltransferase 1 [Source:MGI Symbol;Acc:MGI:2443162]
ENSMUSG00000037860ENSMUST00000147604Aim211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
absent in melanoma 2 [Source:MGI Symbol;Acc:MGI:2686159]
ENSMUSG00000037860ENSMUST00000166137Aim211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
absent in melanoma 2 [Source:MGI Symbol;Acc:MGI:2686159]
ENSMUSG00000038473ENSMUST00000160456Nos1ap11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
nitric oxide synthase 1 (neuronal) adaptor protein [Source:MGI Symbol;Acc:MGI:1917979]
ENSMUSG00000039748ENSMUST00000039725Exo111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
exonuclease 1 [Source:MGI Symbol;Acc:MGI:1349427]
ENSMUSG00000040612ENSMUST00000038620Ildr211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
immunoglobulin-like domain containing receptor 2 [Source:MGI Symbol;Acc:MGI:1196370]
ENSMUSG00000040612ENSMUST00000111416Ildr211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
immunoglobulin-like domain containing receptor 2 [Source:MGI Symbol;Acc:MGI:1196370]
ENSMUSG00000040612ENSMUST00000168893Ildr211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
immunoglobulin-like domain containing receptor 2 [Source:MGI Symbol;Acc:MGI:1196370]
ENSMUSG00000041945ENSMUST00000039672Mfsd911ReverseView as cDNA map |
View as Table
Internal |
Ensembl
major facilitator superfamily domain containing 9 [Source:MGI Symbol;Acc:MGI:2443548]
ENSMUSG00000042197ENSMUST00000019861Zfp45111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
zinc finger protein 451 [Source:MGI Symbol;Acc:MGI:2137896]
ENSMUSG00000042197ENSMUST00000115167Zfp45111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
zinc finger protein 451 [Source:MGI Symbol;Acc:MGI:2137896]
ENSMUSG00000042554ENSMUST00000128128Zp3r11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
zona pellucida 3 receptor [Source:MGI Symbol;Acc:MGI:104965]
ENSMUSG00000042554ENSMUST00000142416Zp3r11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
zona pellucida 3 receptor [Source:MGI Symbol;Acc:MGI:104965]
ENSMUSG00000051480ENSMUST00000054333A130050O07Rik11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA A130050O07 gene [Source:MGI Symbol;Acc:MGI:2443458]
ENSMUSG00000051951ENSMUST00000070533Xkr411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
X Kell blood group precursor related family member 4 [Source:MGI Symbol;Acc:MGI:3528744]
ENSMUSG00000053024ENSMUST00000086521Cntn211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
contactin 2 [Source:MGI Symbol;Acc:MGI:104518]
ENSMUSG00000055067ENSMUST00000128302Smyd311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
SET and MYND domain containing 3 [Source:MGI Symbol;Acc:MGI:1916976]
ENSMUSG00000055322ENSMUST00000169786Tns111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
tensin 1 [Source:MGI Symbol;Acc:MGI:104552]
ENSMUSG00000055322ENSMUST00000171899Tns111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
tensin 1 [Source:MGI Symbol;Acc:MGI:104552]
ENSMUSG00000055866ENSMUST00000069620Per211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
period homolog 2 (Drosophila) [Source:MGI Symbol;Acc:MGI:1195265]
ENSMUSG00000055980ENSMUST00000069799Irs111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
insulin receptor substrate 1 [Source:MGI Symbol;Acc:MGI:99454]
ENSMUSG00000056268ENSMUST00000071518Dennd1b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
DENN/MADD domain containing 1B [Source:MGI Symbol;Acc:MGI:2447812]
ENSMUSG00000056268ENSMUST00000171336Dennd1b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
DENN/MADD domain containing 1B [Source:MGI Symbol;Acc:MGI:2447812]
ENSMUSG00000057363ENSMUST00000126008Uxs111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
UDP-glucuronate decarboxylase 1 [Source:MGI Symbol;Acc:MGI:1915133]
ENSMUSG00000058248ENSMUST00000078470Kcnh111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
potassium voltage-gated channel, subfamily H (eag-related), member 1 [Source:MGI Symbol;Acc:MGI:1341721]
ENSMUSG00000058248ENSMUST00000110844Kcnh111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
potassium voltage-gated channel, subfamily H (eag-related), member 1 [Source:MGI Symbol;Acc:MGI:1341721]
ENSMUSG00000062169ENSMUST00000134115Cnih411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cornichon homolog 4 (Drosophila) [Source:MGI Symbol;Acc:MGI:1925828]
ENSMUSG00000063681ENSMUST00000059825Crb111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
crumbs homolog 1 (Drosophila) [Source:MGI Symbol;Acc:MGI:2136343]
ENSMUSG00000063681ENSMUST00000131586Crb111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
crumbs homolog 1 (Drosophila) [Source:MGI Symbol;Acc:MGI:2136343]
ENSMUSG00000063681ENSMUST00000145244Crb111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
crumbs homolog 1 (Drosophila) [Source:MGI Symbol;Acc:MGI:2136343]
ENSMUSG00000070034ENSMUST00000093508Sp11011ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Sp110 nuclear body protein [Source:MGI Symbol;Acc:MGI:1923364]
ENSMUSG00000070738ENSMUST00000027517Dgkd11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
diacylglycerol kinase, delta [Source:MGI Symbol;Acc:MGI:2138334]
ENSMUSG00000073557ENSMUST00000045665Ppp1r12b11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
protein phosphatase 1, regulatory (inhibitor) subunit 12B [Source:MGI Symbol;Acc:MGI:1916417]
ENSMUSG00000073557ENSMUST00000086444Ppp1r12b11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
protein phosphatase 1, regulatory (inhibitor) subunit 12B [Source:MGI Symbol;Acc:MGI:1916417]
ENSMUSG00000073557ENSMUST00000168381Ppp1r12b11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
protein phosphatase 1, regulatory (inhibitor) subunit 12B [Source:MGI Symbol;Acc:MGI:1916417]
ENSMUSG00000073678ENSMUST00000097739Pgap111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
post-GPI attachment to proteins 1 [Source:MGI Symbol;Acc:MGI:2443342]
ENSMUSG00000000194ENSMUST00000056433Gpr10712ForwardView as cDNA map |
View as Table
Internal |
Ensembl
G protein-coupled receptor 107 [Source:MGI Symbol;Acc:MGI:2139054]
ENSMUSG00000001855ENSMUST00000065398Nup21412ForwardView as cDNA map |
View as Table
Internal |
Ensembl
nucleoporin 214 [Source:MGI Symbol;Acc:MGI:1095411]
ENSMUSG00000001855ENSMUST00000138012Nup21412ForwardView as cDNA map |
View as Table
Internal |
Ensembl
nucleoporin 214 [Source:MGI Symbol;Acc:MGI:1095411]
ENSMUSG00000001855ENSMUST00000168996Nup21412ForwardView as cDNA map |
View as Table
Internal |
Ensembl
nucleoporin 214 [Source:MGI Symbol;Acc:MGI:1095411]
ENSMUSG00000002107ENSMUST00000114924Celf212ReverseView as cDNA map |
View as Table
Internal |
Ensembl
CUGBP, Elav-like family member 2 [Source:MGI Symbol;Acc:MGI:1338822]
ENSMUSG00000002458ENSMUST00000002532Rgs1912ReverseView as cDNA map |
View as Table
Internal |
Ensembl
regulator of G-protein signaling 19 [Source:MGI Symbol;Acc:MGI:1915153]
ENSMUSG00000002458ENSMUST00000108769Rgs1912ReverseView as cDNA map |
View as Table
Internal |
Ensembl
regulator of G-protein signaling 19 [Source:MGI Symbol;Acc:MGI:1915153]
ENSMUSG00000002458ENSMUST00000108771Rgs1912ReverseView as cDNA map |
View as Table
Internal |
Ensembl
regulator of G-protein signaling 19 [Source:MGI Symbol;Acc:MGI:1915153]
ENSMUSG00000002458ENSMUST00000108772Rgs1912ReverseView as cDNA map |
View as Table
Internal |
Ensembl
regulator of G-protein signaling 19 [Source:MGI Symbol;Acc:MGI:1915153]
ENSMUSG00000002458ENSMUST00000108776Rgs1912ReverseView as cDNA map |
View as Table
Internal |
Ensembl
regulator of G-protein signaling 19 [Source:MGI Symbol;Acc:MGI:1915153]
ENSMUSG00000002458ENSMUST00000108778Rgs1912ReverseView as cDNA map |
View as Table
Internal |
Ensembl
regulator of G-protein signaling 19 [Source:MGI Symbol;Acc:MGI:1915153]
ENSMUSG00000002458ENSMUST00000144476Rgs1912ReverseView as cDNA map |
View as Table
Internal |
Ensembl
regulator of G-protein signaling 19 [Source:MGI Symbol;Acc:MGI:1915153]
ENSMUSG00000002458ENSMUST00000165416Rgs1912ReverseView as cDNA map |
View as Table
Internal |
Ensembl
regulator of G-protein signaling 19 [Source:MGI Symbol;Acc:MGI:1915153]
ENSMUSG00000003662ENSMUST00000003759Ciao112ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cytosolic iron-sulfur protein assembly 1 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1346998]
ENSMUSG00000004085ENSMUST00000090824B230120H23Rik12ForwardView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA B230120H23 gene [Source:MGI Symbol;Acc:MGI:2443258]
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We gratefully acknowledge support of this work by the William M. Keck Foundation