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Genome: Mus Musculus | mRNA | miRBase 18 (Nov. 2011), ENSEMBL 65 (Dec. 2011) and RNA22v2.0
Description: List of transcripts that are targeted by all of the below miRNA identifiers simultaneously
miRNA's: mmu-miR-293-5p (MIMAT0004573)
Filtering By: Base pair min value: 12 | Folding energy max value (Kcal/mol): -12 | Min miRNA targets: 1 | Max p-value: .1


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Gene IDTranscript IDCommon Gene Name# of miRNA targets
for specified miRNAs
ChromosomeStrand DirectionTranscript Link to view miRNA target predictionsGene LinkDescription
ENSMUSG00000004364ENSMUST00000163119Cul311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cullin 3 [Source:MGI Symbol;Acc:MGI:1347360]
ENSMUSG00000004364ENSMUST00000164108Cul311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cullin 3 [Source:MGI Symbol;Acc:MGI:1347360]
ENSMUSG00000005674ENSMUST00000005817Tomm40l11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
translocase of outer mitochondrial membrane 40 homolog-like (yeast) [Source:MGI Symbol;Acc:MGI:3589112]
ENSMUSG00000005674ENSMUST00000111327Tomm40l11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
translocase of outer mitochondrial membrane 40 homolog-like (yeast) [Source:MGI Symbol;Acc:MGI:3589112]
ENSMUSG00000006005ENSMUST00000064506Tpr11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
translocated promoter region [Source:MGI Symbol;Acc:MGI:1922066]
ENSMUSG00000006005ENSMUST00000119161Tpr11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
translocated promoter region [Source:MGI Symbol;Acc:MGI:1922066]
ENSMUSG00000006010ENSMUST00000111913BC00333111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cDNA sequence BC003331 [Source:MGI Symbol;Acc:MGI:2385108]
ENSMUSG00000015222ENSMUST00000077355Mtap211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
ENSMUSG00000015222ENSMUST00000114012Mtap211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
ENSMUSG00000015222ENSMUST00000114015Mtap211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
ENSMUSG00000015222ENSMUST00000114017Mtap211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
ENSMUSG00000015222ENSMUST00000114018Mtap211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
ENSMUSG00000016481ENSMUST00000027918Cr1l11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
complement component (3b/4b) receptor 1-like [Source:MGI Symbol;Acc:MGI:88513]
ENSMUSG00000026034ENSMUST00000109114Clk111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
CDC-like kinase 1 [Source:MGI Symbol;Acc:MGI:107403]
ENSMUSG00000026072ENSMUST00000027241Il1r111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
interleukin 1 receptor, type I [Source:MGI Symbol;Acc:MGI:96545]
ENSMUSG00000026072ENSMUST00000114795Il1r111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
interleukin 1 receptor, type I [Source:MGI Symbol;Acc:MGI:96545]
ENSMUSG00000026103ENSMUST00000114510Gls11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
glutaminase [Source:MGI Symbol;Acc:MGI:95752]
ENSMUSG00000026149ENSMUST00000027331Tm4sf2011ReverseView as cDNA map |
View as Table
Internal |
Ensembl
transmembrane 4 L six family member 20 [Source:MGI Symbol;Acc:MGI:1913511]
ENSMUSG00000026156ENSMUST00000063663B3gat211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) [Source:MGI Symbol;Acc:MGI:2389490]
ENSMUSG00000026170ENSMUST00000027356Cyp27a111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cytochrome P450, family 27, subfamily a, polypeptide 1 [Source:MGI Symbol;Acc:MGI:88594]
ENSMUSG00000026219ENSMUST00000027421Trip1211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
thyroid hormone receptor interactor 12 [Source:MGI Symbol;Acc:MGI:1309481]
ENSMUSG00000026289ENSMUST00000027512Atg16l111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
autophagy-related 16-like 1 (yeast) [Source:MGI Symbol;Acc:MGI:1924290]
ENSMUSG00000026289ENSMUST00000113186Atg16l111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
autophagy-related 16-like 1 (yeast) [Source:MGI Symbol;Acc:MGI:1924290]
ENSMUSG00000026305ENSMUST00000068116Lrrfip111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
leucine rich repeat (in FLII) interacting protein 1 [Source:MGI Symbol;Acc:MGI:1342770]
ENSMUSG00000026305ENSMUST00000097649Lrrfip111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
leucine rich repeat (in FLII) interacting protein 1 [Source:MGI Symbol;Acc:MGI:1342770]
ENSMUSG00000026355ENSMUST00000027601Mcm611ReverseView as cDNA map |
View as Table
Internal |
Ensembl
minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1298227]
ENSMUSG00000026355ENSMUST00000164171Mcm611ReverseView as cDNA map |
View as Table
Internal |
Ensembl
minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1298227]
ENSMUSG00000026473ENSMUST00000086199Glul11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
glutamate-ammonia ligase (glutamine synthetase) [Source:MGI Symbol;Acc:MGI:95739]
ENSMUSG00000026496ENSMUST00000027777Parp111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
poly (ADP-ribose) polymerase family, member 1 [Source:MGI Symbol;Acc:MGI:1340806]
ENSMUSG00000026514ENSMUST00000027795Cnih311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cornichon homolog 3 (Drosophila) [Source:MGI Symbol;Acc:MGI:1920228]
ENSMUSG00000026565ENSMUST00000160260Pou2f111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
POU domain, class 2, transcription factor 1 [Source:MGI Symbol;Acc:MGI:101898]
ENSMUSG00000026567ENSMUST00000027852Adcy1011ForwardView as cDNA map |
View as Table
Internal |
Ensembl
adenylate cyclase 10 [Source:MGI Symbol;Acc:MGI:2660854]
ENSMUSG00000026616ENSMUST00000082321Cr211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
complement receptor 2 [Source:MGI Symbol;Acc:MGI:88489]
ENSMUSG00000026640ENSMUST00000027952Plxna211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
plexin A2 [Source:MGI Symbol;Acc:MGI:107684]
ENSMUSG00000026659ENSMUST00000027970Dusp1211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
dual specificity phosphatase 12 [Source:MGI Symbol;Acc:MGI:1890614]
ENSMUSG00000026659ENSMUST00000046476Dusp1211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
dual specificity phosphatase 12 [Source:MGI Symbol;Acc:MGI:1890614]
ENSMUSG00000026691ENSMUST00000028010Fmo311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
flavin containing monooxygenase 3 [Source:MGI Symbol;Acc:MGI:1100496]
ENSMUSG00000026700ENSMUST00000028024Tnfsf411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
tumor necrosis factor (ligand) superfamily, member 4 [Source:MGI Symbol;Acc:MGI:104511]
ENSMUSG00000032769ENSMUST00000041447Trpa111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
transient receptor potential cation channel, subfamily A, member 1 [Source:MGI Symbol;Acc:MGI:3522699]
ENSMUSG00000033569ENSMUST00000041838Bai311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
brain-specific angiogenesis inhibitor 3 [Source:MGI Symbol;Acc:MGI:2441837]
ENSMUSG00000033569ENSMUST00000135518Bai311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
brain-specific angiogenesis inhibitor 3 [Source:MGI Symbol;Acc:MGI:2441837]
ENSMUSG00000033569ENSMUST00000146592Bai311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
brain-specific angiogenesis inhibitor 3 [Source:MGI Symbol;Acc:MGI:2441837]
ENSMUSG00000033569ENSMUST00000151309Bai311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
brain-specific angiogenesis inhibitor 3 [Source:MGI Symbol;Acc:MGI:2441837]
ENSMUSG00000037375ENSMUST00000154755Hhat11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
hedgehog acyltransferase [Source:MGI Symbol;Acc:MGI:2444681]
ENSMUSG00000037503ENSMUST00000047534Fam168b11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
family with sequence similarity 168, member B [Source:MGI Symbol;Acc:MGI:2448487]
ENSMUSG00000038174ENSMUST00000161600Fam126b11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
family with sequence similarity 126, member B [Source:MGI Symbol;Acc:MGI:1098784]
ENSMUSG00000039783ENSMUST00000040250Kmo11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
kynurenine 3-monooxygenase (kynurenine 3-hydroxylase) [Source:MGI Symbol;Acc:MGI:2138151]
ENSMUSG00000039783ENSMUST00000097458Kmo11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
kynurenine 3-monooxygenase (kynurenine 3-hydroxylase) [Source:MGI Symbol;Acc:MGI:2138151]
ENSMUSG00000040423ENSMUST00000161609Rc3h111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
RING CCCH (C3H) domains 1 [Source:MGI Symbol;Acc:MGI:2685397]
ENSMUSG00000040596ENSMUST00000111411Pogk11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
pogo transposable element with KRAB domain [Source:MGI Symbol;Acc:MGI:1918842]
ENSMUSG00000040596ENSMUST00000128861Pogk11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
pogo transposable element with KRAB domain [Source:MGI Symbol;Acc:MGI:1918842]
ENSMUSG00000040596ENSMUST00000131487Pogk11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
pogo transposable element with KRAB domain [Source:MGI Symbol;Acc:MGI:1918842]
ENSMUSG00000040596ENSMUST00000169324Pogk11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
pogo transposable element with KRAB domain [Source:MGI Symbol;Acc:MGI:1918842]
ENSMUSG00000040710ENSMUST00000043336St8sia411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 [Source:MGI Symbol;Acc:MGI:106018]
ENSMUSG00000041303ENSMUST00000041638Gtf3c311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
general transcription factor IIIC, polypeptide 3 [Source:MGI Symbol;Acc:MGI:2138383]
ENSMUSG00000041406ENSMUST00000045876BC05532411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cDNA sequence BC055324 [Source:MGI Symbol;Acc:MGI:3590554]
ENSMUSG00000041406ENSMUST00000097493BC05532411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cDNA sequence BC055324 [Source:MGI Symbol;Acc:MGI:3590554]
ENSMUSG00000041670ENSMUST00000081544Rims111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
regulating synaptic membrane exocytosis 1 [Source:MGI Symbol;Acc:MGI:2152971]
ENSMUSG00000041670ENSMUST00000097809Rims111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
regulating synaptic membrane exocytosis 1 [Source:MGI Symbol;Acc:MGI:2152971]
ENSMUSG00000041670ENSMUST00000097810Rims111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
regulating synaptic membrane exocytosis 1 [Source:MGI Symbol;Acc:MGI:2152971]
ENSMUSG00000041670ENSMUST00000097811Rims111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
regulating synaptic membrane exocytosis 1 [Source:MGI Symbol;Acc:MGI:2152971]
ENSMUSG00000041670ENSMUST00000115273Rims111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
regulating synaptic membrane exocytosis 1 [Source:MGI Symbol;Acc:MGI:2152971]
ENSMUSG00000042197ENSMUST00000019861Zfp45111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
zinc finger protein 451 [Source:MGI Symbol;Acc:MGI:2137896]
ENSMUSG00000042197ENSMUST00000115167Zfp45111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
zinc finger protein 451 [Source:MGI Symbol;Acc:MGI:2137896]
ENSMUSG00000042772ENSMUST00000073441Smg711ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans) [Source:MGI Symbol;Acc:MGI:2682334]
ENSMUSG00000042772ENSMUST00000111836Smg711ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans) [Source:MGI Symbol;Acc:MGI:2682334]
ENSMUSG00000042772ENSMUST00000164030Smg711ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Smg-7 homolog, nonsense mediated mRNA decay factor (C. elegans) [Source:MGI Symbol;Acc:MGI:2682334]
ENSMUSG00000042793ENSMUST00000044828Lgr611ReverseView as cDNA map |
View as Table
Internal |
Ensembl
leucine-rich repeat-containing G protein-coupled receptor 6 [Source:MGI Symbol;Acc:MGI:2441805]
ENSMUSG00000046643ENSMUST00000057548Olfr21811ForwardView as cDNA map |
View as Table
Internal |
Ensembl
olfactory receptor 218 [Source:MGI Symbol;Acc:MGI:3030052]
ENSMUSG00000048000ENSMUST00000027475Gigyf211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
GRB10 interacting GYF protein 2 [Source:MGI Symbol;Acc:MGI:2138584]
ENSMUSG00000048000ENSMUST00000172794Gigyf211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
GRB10 interacting GYF protein 2 [Source:MGI Symbol;Acc:MGI:2138584]
ENSMUSG00000048000ENSMUST00000174501Gigyf211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
GRB10 interacting GYF protein 2 [Source:MGI Symbol;Acc:MGI:2138584]
ENSMUSG00000049881ENSMUST000000615372810025M15Rik11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA 2810025M15 gene [Source:MGI Symbol;Acc:MGI:1917203]
ENSMUSG00000050229ENSMUST00000052455Pigm11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
phosphatidylinositol glycan anchor biosynthesis, class M [Source:MGI Symbol;Acc:MGI:1914806]
ENSMUSG00000050777ENSMUST00000056089Tmem3711ReverseView as cDNA map |
View as Table
Internal |
Ensembl
transmembrane protein 37 [Source:MGI Symbol;Acc:MGI:2157899]
ENSMUSG00000052477ENSMUST00000064341C130026I21Rik11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA C130026I21 gene [Source:MGI Symbol;Acc:MGI:3612702]
ENSMUSG00000052477ENSMUST00000093506C130026I21Rik11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA C130026I21 gene [Source:MGI Symbol;Acc:MGI:3612702]
ENSMUSG00000052748ENSMUST000000647711200016B10Rik11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA 1200016B10 gene [Source:MGI Symbol;Acc:MGI:1914125]
ENSMUSG00000052748ENSMUST000000862791200016B10Rik11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA 1200016B10 gene [Source:MGI Symbol;Acc:MGI:1914125]
ENSMUSG00000052748ENSMUST000001118831200016B10Rik11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA 1200016B10 gene [Source:MGI Symbol;Acc:MGI:1914125]
ENSMUSG00000053024ENSMUST00000086521Cntn211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
contactin 2 [Source:MGI Symbol;Acc:MGI:104518]
ENSMUSG00000053963ENSMUST000001365216330403A02Rik11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA 6330403A02 gene [Source:MGI Symbol;Acc:MGI:2138735]
ENSMUSG00000054770ENSMUST00000114410Kctd1821ReverseView as cDNA map |
View as Table
Internal |
Ensembl
potassium channel tetramerisation domain containing 18 [Source:MGI Symbol;Acc:MGI:3603813]
ENSMUSG00000054770ENSMUST00000161608Kctd1821ReverseView as cDNA map |
View as Table
Internal |
Ensembl
potassium channel tetramerisation domain containing 18 [Source:MGI Symbol;Acc:MGI:3603813]
ENSMUSG00000054770ENSMUST00000163061Kctd1821ReverseView as cDNA map |
View as Table
Internal |
Ensembl
potassium channel tetramerisation domain containing 18 [Source:MGI Symbol;Acc:MGI:3603813]
ENSMUSG00000054770ENSMUST00000165606Kctd1821ReverseView as cDNA map |
View as Table
Internal |
Ensembl
potassium channel tetramerisation domain containing 18 [Source:MGI Symbol;Acc:MGI:3603813]
ENSMUSG00000055322ENSMUST00000050681Tns111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
tensin 1 [Source:MGI Symbol;Acc:MGI:104552]
ENSMUSG00000055322ENSMUST00000169786Tns121ReverseView as cDNA map |
View as Table
Internal |
Ensembl
tensin 1 [Source:MGI Symbol;Acc:MGI:104552]
ENSMUSG00000055322ENSMUST00000171899Tns121ReverseView as cDNA map |
View as Table
Internal |
Ensembl
tensin 1 [Source:MGI Symbol;Acc:MGI:104552]
ENSMUSG00000056268ENSMUST00000071518Dennd1b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
DENN/MADD domain containing 1B [Source:MGI Symbol;Acc:MGI:2447812]
ENSMUSG00000056268ENSMUST00000171336Dennd1b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
DENN/MADD domain containing 1B [Source:MGI Symbol;Acc:MGI:2447812]
ENSMUSG00000056870ENSMUST00000074525Gulp111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
GULP, engulfment adaptor PTB domain containing 1 [Source:MGI Symbol;Acc:MGI:1920407]
ENSMUSG00000058248ENSMUST00000078470Kcnh111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
potassium voltage-gated channel, subfamily H (eag-related), member 1 [Source:MGI Symbol;Acc:MGI:1341721]
ENSMUSG00000058248ENSMUST00000110844Kcnh111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
potassium voltage-gated channel, subfamily H (eag-related), member 1 [Source:MGI Symbol;Acc:MGI:1341721]
ENSMUSG00000063681ENSMUST00000131586Crb111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
crumbs homolog 1 (Drosophila) [Source:MGI Symbol;Acc:MGI:2136343]
ENSMUSG00000064302ENSMUST00000049404Clasp111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
CLIP associating protein 1 [Source:MGI Symbol;Acc:MGI:1923957]
ENSMUSG00000064302ENSMUST00000070989Clasp111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
CLIP associating protein 1 [Source:MGI Symbol;Acc:MGI:1923957]
ENSMUSG00000064302ENSMUST00000165223Clasp111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
CLIP associating protein 1 [Source:MGI Symbol;Acc:MGI:1923957]
ENSMUSG00000066755ENSMUST00000086084Tnfsf1811ForwardView as cDNA map |
View as Table
Internal |
Ensembl
tumor necrosis factor (ligand) superfamily, member 18 [Source:MGI Symbol;Acc:MGI:2673064]
ENSMUSG00000067780ENSMUST00000088476Pi1511ForwardView as cDNA map |
View as Table
Internal |
Ensembl
peptidase inhibitor 15 [Source:MGI Symbol;Acc:MGI:1934659]
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We gratefully acknowledge support of this work by the William M. Keck Foundation