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Genome: Mus Musculus | mRNA | miRBase 18 (Nov. 2011), ENSEMBL 65 (Dec. 2011) and RNA22v2.0
Description: List of transcripts that are targeted by all of the below miRNA identifiers simultaneously
miRNA's: mmu-let-7b-3p (MIMAT0004621)
Filtering By: Base pair min value: 12 | Folding energy max value (Kcal/mol): -12 | Min miRNA targets: 1 | Max p-value: .1


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Gene IDTranscript IDCommon Gene Name# of miRNA targets
for specified miRNAs
ChromosomeStrand DirectionTranscript Link to view miRNA target predictionsGene LinkDescription
ENSMUSG00000003458ENSMUST00000003550Ncstn11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
nicastrin [Source:MGI Symbol;Acc:MGI:1891700]
ENSMUSG00000004364ENSMUST00000163119Cul311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cullin 3 [Source:MGI Symbol;Acc:MGI:1347360]
ENSMUSG00000004872ENSMUST00000004994Pax311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
paired box gene 3 [Source:MGI Symbol;Acc:MGI:97487]
ENSMUSG00000004872ENSMUST00000087086Pax311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
paired box gene 3 [Source:MGI Symbol;Acc:MGI:97487]
ENSMUSG00000004880ENSMUST00000005003Lbr11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
lamin B receptor [Source:MGI Symbol;Acc:MGI:2138281]
ENSMUSG00000006301ENSMUST00000016309Tmbim111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
transmembrane BAX inhibitor motif containing 1 [Source:MGI Symbol;Acc:MGI:1916910]
ENSMUSG00000006301ENSMUST00000113796Tmbim121ReverseView as cDNA map |
View as Table
Internal |
Ensembl
transmembrane BAX inhibitor motif containing 1 [Source:MGI Symbol;Acc:MGI:1916910]
ENSMUSG00000009905ENSMUST00000010049Kdsr11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
3-ketodihydrosphingosine reductase [Source:MGI Symbol;Acc:MGI:1918000]
ENSMUSG00000009907ENSMUST00000094646Vps4b11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
vacuolar protein sorting 4b (yeast) [Source:MGI Symbol;Acc:MGI:1100499]
ENSMUSG00000012187ENSMUST00000012331Mogat111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
monoacylglycerol O-acyltransferase 1 [Source:MGI Symbol;Acc:MGI:1915643]
ENSMUSG00000012187ENSMUST00000113524Mogat111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
monoacylglycerol O-acyltransferase 1 [Source:MGI Symbol;Acc:MGI:1915643]
ENSMUSG00000015843ENSMUST00000015987Rxrg11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
retinoid X receptor gamma [Source:MGI Symbol;Acc:MGI:98216]
ENSMUSG00000015843ENSMUST00000111380Rxrg11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
retinoid X receptor gamma [Source:MGI Symbol;Acc:MGI:98216]
ENSMUSG00000015843ENSMUST00000111384Rxrg11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
retinoid X receptor gamma [Source:MGI Symbol;Acc:MGI:98216]
ENSMUSG00000015843ENSMUST00000111386Rxrg11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
retinoid X receptor gamma [Source:MGI Symbol;Acc:MGI:98216]
ENSMUSG00000016181ENSMUST00000085555Diexf11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
digestive organ expansion factor homolog (zebrafish) [Source:MGI Symbol;Acc:MGI:2138080]
ENSMUSG00000018199ENSMUST00000159879Trove211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
TROVE domain family, member 2 [Source:MGI Symbol;Acc:MGI:106652]
ENSMUSG00000019699ENSMUST00000111159Akt311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
thymoma viral proto-oncogene 3 [Source:MGI Symbol;Acc:MGI:1345147]
ENSMUSG00000019699ENSMUST00000111160Akt311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
thymoma viral proto-oncogene 3 [Source:MGI Symbol;Acc:MGI:1345147]
ENSMUSG00000025900ENSMUST00000027032Rp111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
retinitis pigmentosa 1 (human) [Source:MGI Symbol;Acc:MGI:1341105]
ENSMUSG00000025900ENSMUST00000115540Rp111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
retinitis pigmentosa 1 (human) [Source:MGI Symbol;Acc:MGI:1341105]
ENSMUSG00000025955ENSMUST00000069142Akr1cl11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
aldo-keto reductase family 1, member C-like [Source:MGI Symbol;Acc:MGI:1918111]
ENSMUSG00000025956ENSMUST00000053469Mettl21a11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
methyltransferase like 21A [Source:MGI Symbol;Acc:MGI:1914349]
ENSMUSG00000025956ENSMUST00000114079Mettl21a11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
methyltransferase like 21A [Source:MGI Symbol;Acc:MGI:1914349]
ENSMUSG00000025959ENSMUST00000114086Klf711ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Kruppel-like factor 7 (ubiquitous) [Source:MGI Symbol;Acc:MGI:1935151]
ENSMUSG00000025962ENSMUST00000027103Fastkd211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
FAST kinase domains 2 [Source:MGI Symbol;Acc:MGI:1922869]
ENSMUSG00000025969ENSMUST00000027112Nrp211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neuropilin 2 [Source:MGI Symbol;Acc:MGI:1100492]
ENSMUSG00000025969ENSMUST00000114155Nrp211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neuropilin 2 [Source:MGI Symbol;Acc:MGI:1100492]
ENSMUSG00000025980ENSMUST00000027123Hspd111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
heat shock protein 1 (chaperonin) [Source:MGI Symbol;Acc:MGI:96242]
ENSMUSG00000025991ENSMUST00000027144Cps111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
carbamoyl-phosphate synthetase 1 [Source:MGI Symbol;Acc:MGI:891996]
ENSMUSG00000026043ENSMUST00000087883Col3a111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
ENSMUSG00000026043ENSMUST00000172410Col3a111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
collagen, type III, alpha 1 [Source:MGI Symbol;Acc:MGI:88453]
ENSMUSG00000026048ENSMUST00000027214Ercc511ForwardView as cDNA map |
View as Table
Internal |
Ensembl
excision repair cross-complementing rodent repair deficiency, complementation group 5 [Source:MGI Symbol;Acc:MGI:103582]
ENSMUSG00000026048ENSMUST00000166196Ercc511ForwardView as cDNA map |
View as Table
Internal |
Ensembl
excision repair cross-complementing rodent repair deficiency, complementation group 5 [Source:MGI Symbol;Acc:MGI:103582]
ENSMUSG00000026077ENSMUST00000056815Npas211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neuronal PAS domain protein 2 [Source:MGI Symbol;Acc:MGI:109232]
ENSMUSG00000026100ENSMUST00000027269Mstn11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
myostatin [Source:MGI Symbol;Acc:MGI:95691]
ENSMUSG00000026114ENSMUST00000027288Cnga311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cyclic nucleotide gated channel alpha 3 [Source:MGI Symbol;Acc:MGI:1341818]
ENSMUSG00000026171ENSMUST00000027357Rnf2511ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ring finger protein 25 [Source:MGI Symbol;Acc:MGI:1890215]
ENSMUSG00000026198ENSMUST00000027396Abcb611ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ATP-binding cassette, sub-family B (MDR/TAP), member 6 [Source:MGI Symbol;Acc:MGI:1921354]
ENSMUSG00000026209ENSMUST00000171858Dnpep11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
aspartyl aminopeptidase [Source:MGI Symbol;Acc:MGI:1278328]
ENSMUSG00000026224ENSMUST000000274264933407L21Rik11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA 4933407L21 gene [Source:MGI Symbol;Acc:MGI:1918391]
ENSMUSG00000026234ENSMUST00000027438Ncl11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
nucleolin [Source:MGI Symbol;Acc:MGI:97286]
ENSMUSG00000026240ENSMUST00000027446Cops7b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
COP9 (constitutive photomorphogenic) homolog, subunit 7b (Arabidopsis thaliana) [Source:MGI Symbol;Acc:MGI:1349388]
ENSMUSG00000026240ENSMUST00000121534Cops7b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
COP9 (constitutive photomorphogenic) homolog, subunit 7b (Arabidopsis thaliana) [Source:MGI Symbol;Acc:MGI:1349388]
ENSMUSG00000026245ENSMUST00000068333Farsb11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
phenylalanyl-tRNA synthetase, beta subunit [Source:MGI Symbol;Acc:MGI:1346035]
ENSMUSG00000026260ENSMUST00000027478Ndufa1011ReverseView as cDNA map |
View as Table
Internal |
Ensembl
NADH dehydrogenase (ubiquinone) 1 alpha subcomplex 10 [Source:MGI Symbol;Acc:MGI:1914523]
ENSMUSG00000026275ENSMUST00000027494Ppp1r711ForwardView as cDNA map |
View as Table
Internal |
Ensembl
protein phosphatase 1, regulatory (inhibitor) subunit 7 [Source:MGI Symbol;Acc:MGI:1913635]
ENSMUSG00000026289ENSMUST00000027512Atg16l111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
autophagy-related 16-like 1 (yeast) [Source:MGI Symbol;Acc:MGI:1924290]
ENSMUSG00000026289ENSMUST00000113186Atg16l111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
autophagy-related 16-like 1 (yeast) [Source:MGI Symbol;Acc:MGI:1924290]
ENSMUSG00000026305ENSMUST00000097649Lrrfip111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
leucine rich repeat (in FLII) interacting protein 1 [Source:MGI Symbol;Acc:MGI:1342770]
ENSMUSG00000026313ENSMUST00000008995Hdac411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
histone deacetylase 4 [Source:MGI Symbol;Acc:MGI:3036234]
ENSMUSG00000026333ENSMUST00000112844Gin111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
gypsy retrotransposon integrase 1 [Source:MGI Symbol;Acc:MGI:2182036]
ENSMUSG00000026341ENSMUST00000027579Actr311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ARP3 actin-related protein 3 homolog (yeast) [Source:MGI Symbol;Acc:MGI:1921367]
ENSMUSG00000026361ENSMUST00000018337Cdc7311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2384876]
ENSMUSG00000026374ENSMUST00000027623Tsn11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
translin [Source:MGI Symbol;Acc:MGI:109263]
ENSMUSG00000026380ENSMUST00000027629Tcfcp2l111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
transcription factor CP2-like 1 [Source:MGI Symbol;Acc:MGI:2444691]
ENSMUSG00000026415ENSMUST00000027670Fcamr11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Fc receptor, IgA, IgM, high affinity [Source:MGI Symbol;Acc:MGI:1927803]
ENSMUSG00000026425ENSMUST00000097588Srgap211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
SLIT-ROBO Rho GTPase activating protein 2 [Source:MGI Symbol;Acc:MGI:109605]
ENSMUSG00000026432ENSMUST00000027690Avpr1b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
arginine vasopressin receptor 1B [Source:MGI Symbol;Acc:MGI:1347010]
ENSMUSG00000026434ENSMUST00000062264Nucks111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
nuclear casein kinase and cyclin-dependent kinase substrate 1 [Source:MGI Symbol;Acc:MGI:1934811]
ENSMUSG00000026442ENSMUST00000043189Nfasc11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
neurofascin [Source:MGI Symbol;Acc:MGI:104753]
ENSMUSG00000026442ENSMUST00000094569Nfasc11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
neurofascin [Source:MGI Symbol;Acc:MGI:104753]
ENSMUSG00000026463ENSMUST00000143567Atp2b411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ATPase, Ca++ transporting, plasma membrane 4 [Source:MGI Symbol;Acc:MGI:88111]
ENSMUSG00000026463ENSMUST00000165602Atp2b411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ATPase, Ca++ transporting, plasma membrane 4 [Source:MGI Symbol;Acc:MGI:88111]
ENSMUSG00000026482ENSMUST00000027760Rgl111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ral guanine nucleotide dissociation stimulator,-like 1 [Source:MGI Symbol;Acc:MGI:107484]
ENSMUSG00000026482ENSMUST00000111857Rgl111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ral guanine nucleotide dissociation stimulator,-like 1 [Source:MGI Symbol;Acc:MGI:107484]
ENSMUSG00000026482ENSMUST00000111859Rgl111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ral guanine nucleotide dissociation stimulator,-like 1 [Source:MGI Symbol;Acc:MGI:107484]
ENSMUSG00000026495ENSMUST00000027775Efcab211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
EF-hand calcium binding domain 2 [Source:MGI Symbol;Acc:MGI:1915476]
ENSMUSG00000026509ENSMUST00000068505Capn211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
calpain 2 [Source:MGI Symbol;Acc:MGI:88264]
ENSMUSG00000026554ENSMUST00000074144Dcaf811ForwardView as cDNA map |
View as Table
Internal |
Ensembl
DDB1 and CUL4 associated factor 8 [Source:MGI Symbol;Acc:MGI:91860]
ENSMUSG00000026566ENSMUST00000111435Mpzl131ReverseView as cDNA map |
View as Table
Internal |
Ensembl
myelin protein zero-like 1 [Source:MGI Symbol;Acc:MGI:1915731]
ENSMUSG00000026589ENSMUST00000027881Sec16b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
SEC16 homolog B (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2148802]
ENSMUSG00000026589ENSMUST00000086130Sec16b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
SEC16 homolog B (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2148802]
ENSMUSG00000026589ENSMUST00000111700Sec16b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
SEC16 homolog B (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2148802]
ENSMUSG00000026609ENSMUST00000027905Ush2a11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Usher syndrome 2A (autosomal recessive, mild) homolog (human) [Source:MGI Symbol;Acc:MGI:1341292]
ENSMUSG00000026609ENSMUST00000060479Ush2a11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Usher syndrome 2A (autosomal recessive, mild) homolog (human) [Source:MGI Symbol;Acc:MGI:1341292]
ENSMUSG00000026616ENSMUST00000082321Cr211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
complement receptor 2 [Source:MGI Symbol;Acc:MGI:88489]
ENSMUSG00000026618ENSMUST00000027921Iars211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
isoleucine-tRNA synthetase 2, mitochondrial [Source:MGI Symbol;Acc:MGI:1919586]
ENSMUSG00000026618ENSMUST00000110975Iars211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
isoleucine-tRNA synthetase 2, mitochondrial [Source:MGI Symbol;Acc:MGI:1919586]
ENSMUSG00000026621ENSMUST00000048462Mosc111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
MOCO sulphurase C-terminal domain containing 1 [Source:MGI Symbol;Acc:MGI:1913362]
ENSMUSG00000026623ENSMUST00000110855Lpgat111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
lysophosphatidylglycerol acyltransferase 1 [Source:MGI Symbol;Acc:MGI:2446186]
ENSMUSG00000026674ENSMUST00000027985Ddr211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
discoidin domain receptor family, member 2 [Source:MGI Symbol;Acc:MGI:1345277]
ENSMUSG00000026674ENSMUST00000170800Ddr211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
discoidin domain receptor family, member 2 [Source:MGI Symbol;Acc:MGI:1345277]
ENSMUSG00000026698ENSMUST00000028021Pigc11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
phosphatidylinositol glycan anchor biosynthesis, class C [Source:MGI Symbol;Acc:MGI:1914542]
ENSMUSG00000026698ENSMUST00000111594Pigc11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
phosphatidylinositol glycan anchor biosynthesis, class C [Source:MGI Symbol;Acc:MGI:1914542]
ENSMUSG00000026701ENSMUST00000071718Prdx611ReverseView as cDNA map |
View as Table
Internal |
Ensembl
peroxiredoxin 6 [Source:MGI Symbol;Acc:MGI:894320]
ENSMUSG00000033124ENSMUST00000040689Atg9a11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
autophagy-related 9A (yeast) [Source:MGI Symbol;Acc:MGI:2138446]
ENSMUSG00000033257ENSMUST00000042125Ttll411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
tubulin tyrosine ligase-like family, member 4 [Source:MGI Symbol;Acc:MGI:1914784]
ENSMUSG00000033276ENSMUST00000042446Stk3611ForwardView as cDNA map |
View as Table
Internal |
Ensembl
serine/threonine kinase 36 (fused homolog, Drosophila) [Source:MGI Symbol;Acc:MGI:1920831]
ENSMUSG00000033276ENSMUST00000087183Stk3611ForwardView as cDNA map |
View as Table
Internal |
Ensembl
serine/threonine kinase 36 (fused homolog, Drosophila) [Source:MGI Symbol;Acc:MGI:1920831]
ENSMUSG00000033276ENSMUST00000087186Stk3611ForwardView as cDNA map |
View as Table
Internal |
Ensembl
serine/threonine kinase 36 (fused homolog, Drosophila) [Source:MGI Symbol;Acc:MGI:1920831]
ENSMUSG00000033276ENSMUST00000113699Stk3611ForwardView as cDNA map |
View as Table
Internal |
Ensembl
serine/threonine kinase 36 (fused homolog, Drosophila) [Source:MGI Symbol;Acc:MGI:1920831]
ENSMUSG00000033276ENSMUST00000148456Stk3611ForwardView as cDNA map |
View as Table
Internal |
Ensembl
serine/threonine kinase 36 (fused homolog, Drosophila) [Source:MGI Symbol;Acc:MGI:1920831]
ENSMUSG00000034353ENSMUST00000097648Ramp111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
receptor (calcitonin) activity modifying protein 1 [Source:MGI Symbol;Acc:MGI:1858418]
ENSMUSG00000037434ENSMUST00000044954Slc30a121ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 30 (zinc transporter), member 1 [Source:MGI Symbol;Acc:MGI:1345281]
ENSMUSG00000037447ENSMUST00000115032Arid5a11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
AT rich interactive domain 5A (MRF1-like) [Source:MGI Symbol;Acc:MGI:2443039]
ENSMUSG00000037470ENSMUST00000046875Uggt111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
UDP-glucose glycoprotein glucosyltransferase 1 [Source:MGI Symbol;Acc:MGI:2443162]
ENSMUSG00000037509ENSMUST00000047664Arhgef411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Rho guanine nucleotide exchange factor (GEF) 4 [Source:MGI Symbol;Acc:MGI:2442507]
ENSMUSG00000037860ENSMUST00000147604Aim211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
absent in melanoma 2 [Source:MGI Symbol;Acc:MGI:2686159]
ENSMUSG00000037860ENSMUST00000166137Aim211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
absent in melanoma 2 [Source:MGI Symbol;Acc:MGI:2686159]
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We gratefully acknowledge support of this work by the William M. Keck Foundation