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Genome: Mus Musculus | mRNA | miRBase 18 (Nov. 2011), ENSEMBL 65 (Dec. 2011) and RNA22v2.0
Description: List of transcripts that are targeted by all of the below miRNA identifiers simultaneously
miRNA's: mmu-miR-15a-3p (MIMAT0004624)
Filtering By: Base pair min value: 12 | Folding energy max value (Kcal/mol): -12 | Min miRNA targets: 1 | Max p-value: .1


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Gene IDTranscript IDCommon Gene Name# of miRNA targets
for specified miRNAs
ChromosomeStrand DirectionTranscript Link to view miRNA target predictionsGene LinkDescription
ENSMUSG00000000817ENSMUST00000000834Fasl11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Fas ligand (TNF superfamily, member 6) [Source:MGI Symbol;Acc:MGI:99255]
ENSMUSG00000001138ENSMUST00000001166Cnnm311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cyclin M3 [Source:MGI Symbol;Acc:MGI:2151055]
ENSMUSG00000001143ENSMUST00000115011Lman2l11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
lectin, mannose-binding 2-like [Source:MGI Symbol;Acc:MGI:2443010]
ENSMUSG00000001143ENSMUST00000125304Lman2l21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
lectin, mannose-binding 2-like [Source:MGI Symbol;Acc:MGI:2443010]
ENSMUSG00000003051ENSMUST00000003135Elf311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
E74-like factor 3 [Source:MGI Symbol;Acc:MGI:1101781]
ENSMUSG00000003134ENSMUST00000054462Tbc1d811ReverseView as cDNA map |
View as Table
Internal |
Ensembl
TBC1 domain family, member 8 [Source:MGI Symbol;Acc:MGI:1927225]
ENSMUSG00000003135ENSMUST00000003219D1Bwg0212e11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
DNA segment, Chr 1, Brigham & Women's Genetics 0212 expressed [Source:MGI Symbol;Acc:MGI:106580]
ENSMUSG00000003135ENSMUST00000161515D1Bwg0212e11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
DNA segment, Chr 1, Brigham & Women's Genetics 0212 expressed [Source:MGI Symbol;Acc:MGI:106580]
ENSMUSG00000003464ENSMUST00000075895Pex1911ForwardView as cDNA map |
View as Table
Internal |
Ensembl
peroxisomal biogenesis factor 19 [Source:MGI Symbol;Acc:MGI:1334458]
ENSMUSG00000003721ENSMUST00000003818Insig211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
insulin induced gene 2 [Source:MGI Symbol;Acc:MGI:1920249]
ENSMUSG00000003721ENSMUST00000071064Insig211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
insulin induced gene 2 [Source:MGI Symbol;Acc:MGI:1920249]
ENSMUSG00000003721ENSMUST00000159085Insig211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
insulin induced gene 2 [Source:MGI Symbol;Acc:MGI:1920249]
ENSMUSG00000003721ENSMUST00000160968Insig211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
insulin induced gene 2 [Source:MGI Symbol;Acc:MGI:1920249]
ENSMUSG00000004031ENSMUST00000004133Fam5b21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
family with sequence similarity 5, member B [Source:MGI Symbol;Acc:MGI:2443333]
ENSMUSG00000004451ENSMUST00000004565Ralb11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
v-ral simian leukemia viral oncogene homolog B (ras related) [Source:MGI Symbol;Acc:MGI:1927244]
ENSMUSG00000004552ENSMUST00000073350Ctse11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cathepsin E [Source:MGI Symbol;Acc:MGI:107361]
ENSMUSG00000004709ENSMUST00000004829Cd24411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
CD244 natural killer cell receptor 2B4 [Source:MGI Symbol;Acc:MGI:109294]
ENSMUSG00000004880ENSMUST00000005003Lbr11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
lamin B receptor [Source:MGI Symbol;Acc:MGI:2138281]
ENSMUSG00000005338ENSMUST00000111220Cadm311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cell adhesion molecule 3 [Source:MGI Symbol;Acc:MGI:2137858]
ENSMUSG00000005677ENSMUST00000005820Nr1i321ForwardView as cDNA map |
View as Table
Internal |
Ensembl
nuclear receptor subfamily 1, group I, member 3 [Source:MGI Symbol;Acc:MGI:1346307]
ENSMUSG00000005677ENSMUST00000111328Nr1i321ForwardView as cDNA map |
View as Table
Internal |
Ensembl
nuclear receptor subfamily 1, group I, member 3 [Source:MGI Symbol;Acc:MGI:1346307]
ENSMUSG00000005886ENSMUST00000006037Ncoa211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
nuclear receptor coactivator 2 [Source:MGI Symbol;Acc:MGI:1276533]
ENSMUSG00000005886ENSMUST00000068304Ncoa221ReverseView as cDNA map |
View as Table
Internal |
Ensembl
nuclear receptor coactivator 2 [Source:MGI Symbol;Acc:MGI:1276533]
ENSMUSG00000005886ENSMUST00000081713Ncoa221ReverseView as cDNA map |
View as Table
Internal |
Ensembl
nuclear receptor coactivator 2 [Source:MGI Symbol;Acc:MGI:1276533]
ENSMUSG00000006005ENSMUST00000064506Tpr21ForwardView as cDNA map |
View as Table
Internal |
Ensembl
translocated promoter region [Source:MGI Symbol;Acc:MGI:1922066]
ENSMUSG00000006005ENSMUST00000119161Tpr21ForwardView as cDNA map |
View as Table
Internal |
Ensembl
translocated promoter region [Source:MGI Symbol;Acc:MGI:1922066]
ENSMUSG00000006005ENSMUST00000151563Tpr11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
translocated promoter region [Source:MGI Symbol;Acc:MGI:1922066]
ENSMUSG00000006301ENSMUST00000113796Tmbim141ReverseView as cDNA map |
View as Table
Internal |
Ensembl
transmembrane BAX inhibitor motif containing 1 [Source:MGI Symbol;Acc:MGI:1916910]
ENSMUSG00000006403ENSMUST00000006570Adamts411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 4 [Source:MGI Symbol;Acc:MGI:1339949]
ENSMUSG00000006403ENSMUST00000111315Adamts411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 4 [Source:MGI Symbol;Acc:MGI:1339949]
ENSMUSG00000006411ENSMUST00000006578Pvrl411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
poliovirus receptor-related 4 [Source:MGI Symbol;Acc:MGI:1918990]
ENSMUSG00000006411ENSMUST00000111286Pvrl411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
poliovirus receptor-related 4 [Source:MGI Symbol;Acc:MGI:1918990]
ENSMUSG00000006412ENSMUST00000135941Pfdn221ForwardView as cDNA map |
View as Table
Internal |
Ensembl
prefoldin 2 [Source:MGI Symbol;Acc:MGI:1276111]
ENSMUSG00000006576ENSMUST00000006751Slc4a311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 4 (anion exchanger), member 3 [Source:MGI Symbol;Acc:MGI:109350]
ENSMUSG00000006576ENSMUST00000124341Slc4a311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 4 (anion exchanger), member 3 [Source:MGI Symbol;Acc:MGI:109350]
ENSMUSG00000007097ENSMUST00000085913Atp1a211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ATPase, Na+/K+ transporting, alpha 2 polypeptide [Source:MGI Symbol;Acc:MGI:88106]
ENSMUSG00000009418ENSMUST00000040599Nav131ReverseView as cDNA map |
View as Table
Internal |
Ensembl
neuron navigator 1 [Source:MGI Symbol;Acc:MGI:2183683]
ENSMUSG00000009905ENSMUST00000010049Kdsr11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
3-ketodihydrosphingosine reductase [Source:MGI Symbol;Acc:MGI:1918000]
ENSMUSG00000009907ENSMUST00000112736Vps4b11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
vacuolar protein sorting 4b (yeast) [Source:MGI Symbol;Acc:MGI:1100499]
ENSMUSG00000010311ENSMUST00000010455Optc21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
opticin [Source:MGI Symbol;Acc:MGI:2151113]
ENSMUSG00000010311ENSMUST00000124051Optc21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
opticin [Source:MGI Symbol;Acc:MGI:2151113]
ENSMUSG00000010311ENSMUST00000126123Optc21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
opticin [Source:MGI Symbol;Acc:MGI:2151113]
ENSMUSG00000010609ENSMUST00000111105Psen211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
presenilin 2 [Source:MGI Symbol;Acc:MGI:109284]
ENSMUSG00000012187ENSMUST00000012331Mogat111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
monoacylglycerol O-acyltransferase 1 [Source:MGI Symbol;Acc:MGI:1915643]
ENSMUSG00000012187ENSMUST00000113524Mogat111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
monoacylglycerol O-acyltransferase 1 [Source:MGI Symbol;Acc:MGI:1915643]
ENSMUSG00000013275ENSMUST00000086559Slc41a111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 41, member 1 [Source:MGI Symbol;Acc:MGI:2444823]
ENSMUSG00000013593ENSMUST00000013737Ndufs211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
NADH dehydrogenase (ubiquinone) Fe-S protein 2 [Source:MGI Symbol;Acc:MGI:2385112]
ENSMUSG00000013973ENSMUST00000064950Dedd11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
death effector domain-containing [Source:MGI Symbol;Acc:MGI:1333874]
ENSMUSG00000013973ENSMUST00000097467Dedd11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
death effector domain-containing [Source:MGI Symbol;Acc:MGI:1333874]
ENSMUSG00000013973ENSMUST00000111299Dedd11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
death effector domain-containing [Source:MGI Symbol;Acc:MGI:1333874]
ENSMUSG00000013973ENSMUST00000111300Dedd11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
death effector domain-containing [Source:MGI Symbol;Acc:MGI:1333874]
ENSMUSG00000014602ENSMUST00000086819Kif1a21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
kinesin family member 1A [Source:MGI Symbol;Acc:MGI:108391]
ENSMUSG00000014602ENSMUST00000112958Kif1a21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
kinesin family member 1A [Source:MGI Symbol;Acc:MGI:108391]
ENSMUSG00000014602ENSMUST00000168448Kif1a21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
kinesin family member 1A [Source:MGI Symbol;Acc:MGI:108391]
ENSMUSG00000014602ENSMUST00000171556Kif1a21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
kinesin family member 1A [Source:MGI Symbol;Acc:MGI:108391]
ENSMUSG00000014602ENSMUST00000171796Kif1a21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
kinesin family member 1A [Source:MGI Symbol;Acc:MGI:108391]
ENSMUSG00000015222ENSMUST00000114013Mtap211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
ENSMUSG00000015314ENSMUST00000042184Slamf621ForwardView as cDNA map |
View as Table
Internal |
Ensembl
SLAM family member 6 [Source:MGI Symbol;Acc:MGI:1353620]
ENSMUSG00000015314ENSMUST00000171330Slamf621ForwardView as cDNA map |
View as Table
Internal |
Ensembl
SLAM family member 6 [Source:MGI Symbol;Acc:MGI:1353620]
ENSMUSG00000015355ENSMUST00000015499Cd4811ForwardView as cDNA map |
View as Table
Internal |
Ensembl
CD48 antigen [Source:MGI Symbol;Acc:MGI:88339]
ENSMUSG00000015355ENSMUST00000068584Cd4811ForwardView as cDNA map |
View as Table
Internal |
Ensembl
CD48 antigen [Source:MGI Symbol;Acc:MGI:88339]
ENSMUSG00000015961ENSMUST00000016105Adss11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
adenylosuccinate synthetase, non muscle [Source:MGI Symbol;Acc:MGI:87948]
ENSMUSG00000016181ENSMUST00000085555Diexf21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
digestive organ expansion factor homolog (zebrafish) [Source:MGI Symbol;Acc:MGI:2138080]
ENSMUSG00000016194ENSMUST00000016338Hsd11b111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
hydroxysteroid 11-beta dehydrogenase 1 [Source:MGI Symbol;Acc:MGI:103562]
ENSMUSG00000016200ENSMUST00000016344Syt1411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
synaptotagmin XIV [Source:MGI Symbol;Acc:MGI:2444490]
ENSMUSG00000016200ENSMUST00000164191Syt1411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
synaptotagmin XIV [Source:MGI Symbol;Acc:MGI:2444490]
ENSMUSG00000016528ENSMUST00000016672Mapkapk211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
MAP kinase-activated protein kinase 2 [Source:MGI Symbol;Acc:MGI:109298]
ENSMUSG00000018196ENSMUST00000145571Glrx211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
glutaredoxin 2 (thioltransferase) [Source:MGI Symbol;Acc:MGI:1916617]
ENSMUSG00000018199ENSMUST00000159879Trove221ReverseView as cDNA map |
View as Table
Internal |
Ensembl
TROVE domain family, member 2 [Source:MGI Symbol;Acc:MGI:106652]
ENSMUSG00000018417ENSMUST00000018561Myo1b21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
myosin IB [Source:MGI Symbol;Acc:MGI:107752]
ENSMUSG00000018417ENSMUST00000046390Myo1b21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
myosin IB [Source:MGI Symbol;Acc:MGI:107752]
ENSMUSG00000018417ENSMUST00000114537Myo1b21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
myosin IB [Source:MGI Symbol;Acc:MGI:107752]
ENSMUSG00000018417ENSMUST00000114541Myo1b21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
myosin IB [Source:MGI Symbol;Acc:MGI:107752]
ENSMUSG00000023150ENSMUST00000023918Ivns1abp11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
influenza virus NS1A binding protein [Source:MGI Symbol;Acc:MGI:2152389]
ENSMUSG00000023150ENSMUST00000097543Ivns1abp11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
influenza virus NS1A binding protein [Source:MGI Symbol;Acc:MGI:2152389]
ENSMUSG00000025774ENSMUST00000026876Crisp411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cysteine-rich secretory protein 4 [Source:MGI Symbol;Acc:MGI:1925331]
ENSMUSG00000025774ENSMUST00000115340Crisp411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cysteine-rich secretory protein 4 [Source:MGI Symbol;Acc:MGI:1925331]
ENSMUSG00000025774ENSMUST00000115344Crisp411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cysteine-rich secretory protein 4 [Source:MGI Symbol;Acc:MGI:1925331]
ENSMUSG00000025776ENSMUST00000095075Crispld121ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cysteine-rich secretory protein LCCL domain containing 1 [Source:MGI Symbol;Acc:MGI:1934666]
ENSMUSG00000025776ENSMUST00000159958Crispld111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cysteine-rich secretory protein LCCL domain containing 1 [Source:MGI Symbol;Acc:MGI:1934666]
ENSMUSG00000025777ENSMUST00000026879Gdap111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
ganglioside-induced differentiation-associated-protein 1 [Source:MGI Symbol;Acc:MGI:1338002]
ENSMUSG00000025900ENSMUST00000027032Rp111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
retinitis pigmentosa 1 (human) [Source:MGI Symbol;Acc:MGI:1341105]
ENSMUSG00000025900ENSMUST00000115540Rp111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
retinitis pigmentosa 1 (human) [Source:MGI Symbol;Acc:MGI:1341105]
ENSMUSG00000025903ENSMUST00000027036Lypla111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
lysophospholipase 1 [Source:MGI Symbol;Acc:MGI:1344588]
ENSMUSG00000025905ENSMUST00000027038Oprk111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
opioid receptor, kappa 1 [Source:MGI Symbol;Acc:MGI:97439]
ENSMUSG00000025905ENSMUST00000160339Oprk111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
opioid receptor, kappa 1 [Source:MGI Symbol;Acc:MGI:97439]
ENSMUSG00000025905ENSMUST00000160777Oprk111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
opioid receptor, kappa 1 [Source:MGI Symbol;Acc:MGI:97439]
ENSMUSG00000025907ENSMUST00000027040Rb1cc121ForwardView as cDNA map |
View as Table
Internal |
Ensembl
RB1-inducible coiled-coil 1 [Source:MGI Symbol;Acc:MGI:1341850]
ENSMUSG00000025909ENSMUST00000115488Sntg111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
syntrophin, gamma 1 [Source:MGI Symbol;Acc:MGI:1918346]
ENSMUSG00000025909ENSMUST00000132064Sntg111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
syntrophin, gamma 1 [Source:MGI Symbol;Acc:MGI:1918346]
ENSMUSG00000025909ENSMUST00000140295Sntg111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
syntrophin, gamma 1 [Source:MGI Symbol;Acc:MGI:1918346]
ENSMUSG00000025911ENSMUST00000144177Adhfe111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
alcohol dehydrogenase, iron containing, 1 [Source:MGI Symbol;Acc:MGI:1923437]
ENSMUSG00000025915ENSMUST00000166384Sgk311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
serum/glucocorticoid regulated kinase 3 [Source:MGI Symbol;Acc:MGI:2182368]
ENSMUSG00000025915ENSMUST00000168907Sgk311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
serum/glucocorticoid regulated kinase 3 [Source:MGI Symbol;Acc:MGI:2182368]
ENSMUSG00000025915ENSMUST00000171265Sgk311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
serum/glucocorticoid regulated kinase 3 [Source:MGI Symbol;Acc:MGI:2182368]
ENSMUSG00000025916ENSMUST00000027049Lrrc6711ReverseView as cDNA map |
View as Table
Internal |
Ensembl
leucine rich repeat containing 67 [Source:MGI Symbol;Acc:MGI:1921138]
ENSMUSG00000025920ENSMUST00000054668Stau211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
staufen (RNA binding protein) homolog 2 (Drosophila) [Source:MGI Symbol;Acc:MGI:1352508]
ENSMUSG00000025920ENSMUST00000162751Stau211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
staufen (RNA binding protein) homolog 2 (Drosophila) [Source:MGI Symbol;Acc:MGI:1352508]
ENSMUSG00000025921ENSMUST00000027053Rdh1011ForwardView as cDNA map |
View as Table
Internal |
Ensembl
retinol dehydrogenase 10 (all-trans) [Source:MGI Symbol;Acc:MGI:1924238]
ENSMUSG00000025925ENSMUST00000027057Terf111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
telomeric repeat binding factor 1 [Source:MGI Symbol;Acc:MGI:109634]
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We gratefully acknowledge support of this work by the William M. Keck Foundation