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Genome: Mus Musculus | mRNA | miRBase 18 (Nov. 2011), ENSEMBL 65 (Dec. 2011) and RNA22v2.0
Description: List of transcripts that are targeted by all of the below miRNA identifiers simultaneously
miRNA's: mmu-miR-138-1-3p (MIMAT0004668)
Filtering By: Base pair min value: 12 | Folding energy max value (Kcal/mol): -12 | Min miRNA targets: 1 | Max p-value: .1


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Gene IDTranscript IDCommon Gene Name# of miRNA targets
for specified miRNAs
ChromosomeStrand DirectionTranscript Link to view miRNA target predictionsGene LinkDescription
ENSMUSG00000000817ENSMUST00000000834Fasl21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Fas ligand (TNF superfamily, member 6) [Source:MGI Symbol;Acc:MGI:99255]
ENSMUSG00000001138ENSMUST00000001166Cnnm331ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cyclin M3 [Source:MGI Symbol;Acc:MGI:2151055]
ENSMUSG00000001143ENSMUST00000125304Lman2l11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
lectin, mannose-binding 2-like [Source:MGI Symbol;Acc:MGI:2443010]
ENSMUSG00000001305ENSMUST00000001339Rrp1511ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ribosomal RNA processing 15 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1914473]
ENSMUSG00000003135ENSMUST00000003219D1Bwg0212e21ForwardView as cDNA map |
View as Table
Internal |
Ensembl
DNA segment, Chr 1, Brigham & Women's Genetics 0212 expressed [Source:MGI Symbol;Acc:MGI:106580]
ENSMUSG00000003135ENSMUST00000161515D1Bwg0212e21ForwardView as cDNA map |
View as Table
Internal |
Ensembl
DNA segment, Chr 1, Brigham & Women's Genetics 0212 expressed [Source:MGI Symbol;Acc:MGI:106580]
ENSMUSG00000003458ENSMUST00000003550Ncstn11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
nicastrin [Source:MGI Symbol;Acc:MGI:1891700]
ENSMUSG00000003464ENSMUST00000075895Pex1921ForwardView as cDNA map |
View as Table
Internal |
Ensembl
peroxisomal biogenesis factor 19 [Source:MGI Symbol;Acc:MGI:1334458]
ENSMUSG00000004031ENSMUST00000004133Fam5b11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
family with sequence similarity 5, member B [Source:MGI Symbol;Acc:MGI:2443333]
ENSMUSG00000004552ENSMUST00000073350Ctse11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cathepsin E [Source:MGI Symbol;Acc:MGI:107361]
ENSMUSG00000004872ENSMUST00000004994Pax311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
paired box gene 3 [Source:MGI Symbol;Acc:MGI:97487]
ENSMUSG00000004872ENSMUST00000087086Pax311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
paired box gene 3 [Source:MGI Symbol;Acc:MGI:97487]
ENSMUSG00000004880ENSMUST00000005003Lbr21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
lamin B receptor [Source:MGI Symbol;Acc:MGI:2138281]
ENSMUSG00000005501ENSMUST00000113153Usp4011ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ubiquitin specific peptidase 40 [Source:MGI Symbol;Acc:MGI:2443184]
ENSMUSG00000005674ENSMUST00000005817Tomm40l11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
translocase of outer mitochondrial membrane 40 homolog-like (yeast) [Source:MGI Symbol;Acc:MGI:3589112]
ENSMUSG00000005674ENSMUST00000111327Tomm40l11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
translocase of outer mitochondrial membrane 40 homolog-like (yeast) [Source:MGI Symbol;Acc:MGI:3589112]
ENSMUSG00000005886ENSMUST00000068304Ncoa211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
nuclear receptor coactivator 2 [Source:MGI Symbol;Acc:MGI:1276533]
ENSMUSG00000005886ENSMUST00000081713Ncoa211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
nuclear receptor coactivator 2 [Source:MGI Symbol;Acc:MGI:1276533]
ENSMUSG00000006299ENSMUST00000006462Aamp21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
angio-associated migratory protein [Source:MGI Symbol;Acc:MGI:107809]
ENSMUSG00000006301ENSMUST00000016309Tmbim121ReverseView as cDNA map |
View as Table
Internal |
Ensembl
transmembrane BAX inhibitor motif containing 1 [Source:MGI Symbol;Acc:MGI:1916910]
ENSMUSG00000006301ENSMUST00000113796Tmbim171ReverseView as cDNA map |
View as Table
Internal |
Ensembl
transmembrane BAX inhibitor motif containing 1 [Source:MGI Symbol;Acc:MGI:1916910]
ENSMUSG00000006403ENSMUST00000006570Adamts411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 4 [Source:MGI Symbol;Acc:MGI:1339949]
ENSMUSG00000006403ENSMUST00000111314Adamts411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 4 [Source:MGI Symbol;Acc:MGI:1339949]
ENSMUSG00000006403ENSMUST00000111315Adamts411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 4 [Source:MGI Symbol;Acc:MGI:1339949]
ENSMUSG00000006411ENSMUST00000006578Pvrl411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
poliovirus receptor-related 4 [Source:MGI Symbol;Acc:MGI:1918990]
ENSMUSG00000006411ENSMUST00000111286Pvrl411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
poliovirus receptor-related 4 [Source:MGI Symbol;Acc:MGI:1918990]
ENSMUSG00000006412ENSMUST00000135941Pfdn211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
prefoldin 2 [Source:MGI Symbol;Acc:MGI:1276111]
ENSMUSG00000006542ENSMUST00000081636Prkag321ReverseView as cDNA map |
View as Table
Internal |
Ensembl
protein kinase, AMP-activated, gamma 3 non-catatlytic subunit [Source:MGI Symbol;Acc:MGI:1891343]
ENSMUSG00000006542ENSMUST00000160732Prkag321ReverseView as cDNA map |
View as Table
Internal |
Ensembl
protein kinase, AMP-activated, gamma 3 non-catatlytic subunit [Source:MGI Symbol;Acc:MGI:1891343]
ENSMUSG00000006576ENSMUST00000124341Slc4a311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 4 (anion exchanger), member 3 [Source:MGI Symbol;Acc:MGI:109350]
ENSMUSG00000007097ENSMUST00000085913Atp1a211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ATPase, Na+/K+ transporting, alpha 2 polypeptide [Source:MGI Symbol;Acc:MGI:88106]
ENSMUSG00000007107ENSMUST00000111243Atp1a411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ATPase, Na+/K+ transporting, alpha 4 polypeptide [Source:MGI Symbol;Acc:MGI:1351335]
ENSMUSG00000007122ENSMUST00000003554Casq111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
calsequestrin 1 [Source:MGI Symbol;Acc:MGI:1309468]
ENSMUSG00000007122ENSMUST00000168901Casq111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
calsequestrin 1 [Source:MGI Symbol;Acc:MGI:1309468]
ENSMUSG00000009418ENSMUST00000040599Nav111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
neuron navigator 1 [Source:MGI Symbol;Acc:MGI:2183683]
ENSMUSG00000010175ENSMUST00000010319Prox111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
prospero-related homeobox 1 [Source:MGI Symbol;Acc:MGI:97772]
ENSMUSG00000010311ENSMUST00000010455Optc11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
opticin [Source:MGI Symbol;Acc:MGI:2151113]
ENSMUSG00000010311ENSMUST00000124051Optc11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
opticin [Source:MGI Symbol;Acc:MGI:2151113]
ENSMUSG00000010311ENSMUST00000153617Optc11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
opticin [Source:MGI Symbol;Acc:MGI:2151113]
ENSMUSG00000010453ENSMUST000001150184632411B12Rik21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA 4632411B12 gene [Source:MGI Symbol;Acc:MGI:1918055]
ENSMUSG00000010609ENSMUST00000111105Psen211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
presenilin 2 [Source:MGI Symbol;Acc:MGI:109284]
ENSMUSG00000012187ENSMUST00000012331Mogat111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
monoacylglycerol O-acyltransferase 1 [Source:MGI Symbol;Acc:MGI:1915643]
ENSMUSG00000012187ENSMUST00000113524Mogat111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
monoacylglycerol O-acyltransferase 1 [Source:MGI Symbol;Acc:MGI:1915643]
ENSMUSG00000013275ENSMUST00000086559Slc41a111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 41, member 1 [Source:MGI Symbol;Acc:MGI:2444823]
ENSMUSG00000013593ENSMUST00000013737Ndufs211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
NADH dehydrogenase (ubiquinone) Fe-S protein 2 [Source:MGI Symbol;Acc:MGI:2385112]
ENSMUSG00000013973ENSMUST00000064950Dedd11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
death effector domain-containing [Source:MGI Symbol;Acc:MGI:1333874]
ENSMUSG00000013973ENSMUST00000097467Dedd11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
death effector domain-containing [Source:MGI Symbol;Acc:MGI:1333874]
ENSMUSG00000013973ENSMUST00000111299Dedd11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
death effector domain-containing [Source:MGI Symbol;Acc:MGI:1333874]
ENSMUSG00000013973ENSMUST00000111300Dedd11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
death effector domain-containing [Source:MGI Symbol;Acc:MGI:1333874]
ENSMUSG00000013997ENSMUST00000111289Nit111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
nitrilase 1 [Source:MGI Symbol;Acc:MGI:1350916]
ENSMUSG00000013997ENSMUST00000111295Nit111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
nitrilase 1 [Source:MGI Symbol;Acc:MGI:1350916]
ENSMUSG00000014602ENSMUST00000086819Kif1a11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
kinesin family member 1A [Source:MGI Symbol;Acc:MGI:108391]
ENSMUSG00000014602ENSMUST00000112958Kif1a11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
kinesin family member 1A [Source:MGI Symbol;Acc:MGI:108391]
ENSMUSG00000014602ENSMUST00000168448Kif1a21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
kinesin family member 1A [Source:MGI Symbol;Acc:MGI:108391]
ENSMUSG00000014602ENSMUST00000171556Kif1a21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
kinesin family member 1A [Source:MGI Symbol;Acc:MGI:108391]
ENSMUSG00000014602ENSMUST00000171796Kif1a21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
kinesin family member 1A [Source:MGI Symbol;Acc:MGI:108391]
ENSMUSG00000015314ENSMUST00000015458Slamf611ForwardView as cDNA map |
View as Table
Internal |
Ensembl
SLAM family member 6 [Source:MGI Symbol;Acc:MGI:1353620]
ENSMUSG00000015314ENSMUST00000042184Slamf611ForwardView as cDNA map |
View as Table
Internal |
Ensembl
SLAM family member 6 [Source:MGI Symbol;Acc:MGI:1353620]
ENSMUSG00000015314ENSMUST00000171330Slamf611ForwardView as cDNA map |
View as Table
Internal |
Ensembl
SLAM family member 6 [Source:MGI Symbol;Acc:MGI:1353620]
ENSMUSG00000015316ENSMUST00000015460Slamf111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
signaling lymphocytic activation molecule family member 1 [Source:MGI Symbol;Acc:MGI:1351314]
ENSMUSG00000015484ENSMUST00000015628Fam163a11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
family with sequence similarity 163, member A [Source:MGI Symbol;Acc:MGI:3618859]
ENSMUSG00000015843ENSMUST00000015987Rxrg11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
retinoid X receptor gamma [Source:MGI Symbol;Acc:MGI:98216]
ENSMUSG00000015843ENSMUST00000111380Rxrg11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
retinoid X receptor gamma [Source:MGI Symbol;Acc:MGI:98216]
ENSMUSG00000015843ENSMUST00000111384Rxrg11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
retinoid X receptor gamma [Source:MGI Symbol;Acc:MGI:98216]
ENSMUSG00000015843ENSMUST00000111386Rxrg11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
retinoid X receptor gamma [Source:MGI Symbol;Acc:MGI:98216]
ENSMUSG00000015961ENSMUST00000016105Adss11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
adenylosuccinate synthetase, non muscle [Source:MGI Symbol;Acc:MGI:87948]
ENSMUSG00000016181ENSMUST00000085555Diexf11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
digestive organ expansion factor homolog (zebrafish) [Source:MGI Symbol;Acc:MGI:2138080]
ENSMUSG00000016200ENSMUST00000016344Syt1411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
synaptotagmin XIV [Source:MGI Symbol;Acc:MGI:2444490]
ENSMUSG00000016200ENSMUST00000164191Syt1411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
synaptotagmin XIV [Source:MGI Symbol;Acc:MGI:2444490]
ENSMUSG00000019230ENSMUST00000112026Lhx911ReverseView as cDNA map |
View as Table
Internal |
Ensembl
LIM homeobox protein 9 [Source:MGI Symbol;Acc:MGI:1316721]
ENSMUSG00000019699ENSMUST00000111159Akt311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
thymoma viral proto-oncogene 3 [Source:MGI Symbol;Acc:MGI:1345147]
ENSMUSG00000019699ENSMUST00000111160Akt311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
thymoma viral proto-oncogene 3 [Source:MGI Symbol;Acc:MGI:1345147]
ENSMUSG00000025774ENSMUST00000026876Crisp411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cysteine-rich secretory protein 4 [Source:MGI Symbol;Acc:MGI:1925331]
ENSMUSG00000025774ENSMUST00000115340Crisp411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cysteine-rich secretory protein 4 [Source:MGI Symbol;Acc:MGI:1925331]
ENSMUSG00000025776ENSMUST00000095075Crispld141ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cysteine-rich secretory protein LCCL domain containing 1 [Source:MGI Symbol;Acc:MGI:1934666]
ENSMUSG00000025776ENSMUST00000159958Crispld121ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cysteine-rich secretory protein LCCL domain containing 1 [Source:MGI Symbol;Acc:MGI:1934666]
ENSMUSG00000025902ENSMUST00000027035Sox1711ReverseView as cDNA map |
View as Table
Internal |
Ensembl
SRY-box containing gene 17 [Source:MGI Symbol;Acc:MGI:107543]
ENSMUSG00000025905ENSMUST00000027038Oprk111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
opioid receptor, kappa 1 [Source:MGI Symbol;Acc:MGI:97439]
ENSMUSG00000025905ENSMUST00000160339Oprk111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
opioid receptor, kappa 1 [Source:MGI Symbol;Acc:MGI:97439]
ENSMUSG00000025905ENSMUST00000160777Oprk111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
opioid receptor, kappa 1 [Source:MGI Symbol;Acc:MGI:97439]
ENSMUSG00000025909ENSMUST00000115488Sntg111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
syntrophin, gamma 1 [Source:MGI Symbol;Acc:MGI:1918346]
ENSMUSG00000025909ENSMUST00000132064Sntg111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
syntrophin, gamma 1 [Source:MGI Symbol;Acc:MGI:1918346]
ENSMUSG00000025909ENSMUST00000140295Sntg121ReverseView as cDNA map |
View as Table
Internal |
Ensembl
syntrophin, gamma 1 [Source:MGI Symbol;Acc:MGI:1918346]
ENSMUSG00000025920ENSMUST00000054668Stau221ReverseView as cDNA map |
View as Table
Internal |
Ensembl
staufen (RNA binding protein) homolog 2 (Drosophila) [Source:MGI Symbol;Acc:MGI:1352508]
ENSMUSG00000025920ENSMUST00000162751Stau221ReverseView as cDNA map |
View as Table
Internal |
Ensembl
staufen (RNA binding protein) homolog 2 (Drosophila) [Source:MGI Symbol;Acc:MGI:1352508]
ENSMUSG00000025927ENSMUST00000027059Tcfap2b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
transcription factor AP-2 beta [Source:MGI Symbol;Acc:MGI:104672]
ENSMUSG00000025927ENSMUST00000064976Tcfap2b21ForwardView as cDNA map |
View as Table
Internal |
Ensembl
transcription factor AP-2 beta [Source:MGI Symbol;Acc:MGI:104672]
ENSMUSG00000025927ENSMUST00000166387Tcfap2b21ForwardView as cDNA map |
View as Table
Internal |
Ensembl
transcription factor AP-2 beta [Source:MGI Symbol;Acc:MGI:104672]
ENSMUSG00000025934ENSMUST00000027067Gsta311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
glutathione S-transferase, alpha 3 [Source:MGI Symbol;Acc:MGI:95856]
ENSMUSG00000025934ENSMUST00000121676Gsta311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
glutathione S-transferase, alpha 3 [Source:MGI Symbol;Acc:MGI:95856]
ENSMUSG00000025937ENSMUST00000027071Lactb211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
lactamase, beta 2 [Source:MGI Symbol;Acc:MGI:2442551]
ENSMUSG00000025938ENSMUST00000171848Slco5a111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier organic anion transporter family, member 5A1 [Source:MGI Symbol;Acc:MGI:2443431]
ENSMUSG00000025939ENSMUST00000117146Ube2w11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ubiquitin-conjugating enzyme E2W (putative) [Source:MGI Symbol;Acc:MGI:1914049]
ENSMUSG00000025956ENSMUST00000053469Mettl21a21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
methyltransferase like 21A [Source:MGI Symbol;Acc:MGI:1914349]
ENSMUSG00000025956ENSMUST00000114079Mettl21a21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
methyltransferase like 21A [Source:MGI Symbol;Acc:MGI:1914349]
ENSMUSG00000025958ENSMUST00000049932Creb111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cAMP responsive element binding protein 1 [Source:MGI Symbol;Acc:MGI:88494]
ENSMUSG00000025958ENSMUST00000087366Creb111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cAMP responsive element binding protein 1 [Source:MGI Symbol;Acc:MGI:88494]
ENSMUSG00000025958ENSMUST00000171164Creb111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cAMP responsive element binding protein 1 [Source:MGI Symbol;Acc:MGI:88494]
ENSMUSG00000025964ENSMUST00000087374Adam2311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
a disintegrin and metallopeptidase domain 23 [Source:MGI Symbol;Acc:MGI:1345162]
ENSMUSG00000025964ENSMUST00000097717Adam2311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
a disintegrin and metallopeptidase domain 23 [Source:MGI Symbol;Acc:MGI:1345162]
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GUI created by the Computational Medicine Center at the Sidney Kimmel Medical College of Thomas Jefferson University
We gratefully acknowledge support of this work by the William M. Keck Foundation