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Genome: Mus Musculus | mRNA | miRBase 18 (Nov. 2011), ENSEMBL 65 (Dec. 2011) and RNA22v2.0
Description: List of transcripts that are targeted by all of the below miRNA identifiers simultaneously
miRNA's: mmu-miR-7a-1-3p (MIMAT0004670)
Filtering By: Base pair min value: 12 | Folding energy max value (Kcal/mol): -12 | Min miRNA targets: 1 | Max p-value: .1


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Gene IDTranscript IDCommon Gene Name# of miRNA targets
for specified miRNAs
ChromosomeStrand DirectionTranscript Link to view miRNA target predictionsGene LinkDescription
ENSMUSG00000020423ENSMUST00000020692Btg211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
B-cell translocation gene 2, anti-proliferative [Source:MGI Symbol;Acc:MGI:108384]
ENSMUSG00000025915ENSMUST00000097826Sgk311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
serum/glucocorticoid regulated kinase 3 [Source:MGI Symbol;Acc:MGI:2182368]
ENSMUSG00000025915ENSMUST00000166384Sgk311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
serum/glucocorticoid regulated kinase 3 [Source:MGI Symbol;Acc:MGI:2182368]
ENSMUSG00000025915ENSMUST00000168907Sgk311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
serum/glucocorticoid regulated kinase 3 [Source:MGI Symbol;Acc:MGI:2182368]
ENSMUSG00000025915ENSMUST00000171265Sgk311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
serum/glucocorticoid regulated kinase 3 [Source:MGI Symbol;Acc:MGI:2182368]
ENSMUSG00000025969ENSMUST00000063594Nrp211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neuropilin 2 [Source:MGI Symbol;Acc:MGI:1100492]
ENSMUSG00000025969ENSMUST00000075144Nrp211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neuropilin 2 [Source:MGI Symbol;Acc:MGI:1100492]
ENSMUSG00000025969ENSMUST00000102822Nrp211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neuropilin 2 [Source:MGI Symbol;Acc:MGI:1100492]
ENSMUSG00000025969ENSMUST00000114157Nrp211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neuropilin 2 [Source:MGI Symbol;Acc:MGI:1100492]
ENSMUSG00000026009ENSMUST00000102827Icos11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
inducible T-cell co-stimulator [Source:MGI Symbol;Acc:MGI:1858745]
ENSMUSG00000026017ENSMUST00000027171Carf11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
calcium response factor [Source:MGI Symbol;Acc:MGI:2182269]
ENSMUSG00000026017ENSMUST00000168377Carf11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
calcium response factor [Source:MGI Symbol;Acc:MGI:2182269]
ENSMUSG00000026028ENSMUST00000027186Trak211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
trafficking protein, kinesin binding 2 [Source:MGI Symbol;Acc:MGI:1918077]
ENSMUSG00000026062ENSMUST00000027231Slc9a211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 9 (sodium/hydrogen exchanger), member 2 [Source:MGI Symbol;Acc:MGI:105075]
ENSMUSG00000026175ENSMUST00000027366Vil111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
villin 1 [Source:MGI Symbol;Acc:MGI:98930]
ENSMUSG00000026229ENSMUST00000027432Psmd111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 [Source:MGI Symbol;Acc:MGI:1917497]
ENSMUSG00000026271ENSMUST00000027489Gpr3511ForwardView as cDNA map |
View as Table
Internal |
Ensembl
G protein-coupled receptor 35 [Source:MGI Symbol;Acc:MGI:1929509]
ENSMUSG00000026271ENSMUST00000169198Gpr3511ForwardView as cDNA map |
View as Table
Internal |
Ensembl
G protein-coupled receptor 35 [Source:MGI Symbol;Acc:MGI:1929509]
ENSMUSG00000026331ENSMUST00000027569Slco6c111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier organic anion transporter family, member 6c1 [Source:MGI Symbol;Acc:MGI:1921691]
ENSMUSG00000026463ENSMUST00000048953Atp2b411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ATPase, Ca++ transporting, plasma membrane 4 [Source:MGI Symbol;Acc:MGI:88111]
ENSMUSG00000026463ENSMUST00000112264Atp2b411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ATPase, Ca++ transporting, plasma membrane 4 [Source:MGI Symbol;Acc:MGI:88111]
ENSMUSG00000026463ENSMUST00000125659Atp2b411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ATPase, Ca++ transporting, plasma membrane 4 [Source:MGI Symbol;Acc:MGI:88111]
ENSMUSG00000026463ENSMUST00000143567Atp2b411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ATPase, Ca++ transporting, plasma membrane 4 [Source:MGI Symbol;Acc:MGI:88111]
ENSMUSG00000026463ENSMUST00000165602Atp2b411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ATPase, Ca++ transporting, plasma membrane 4 [Source:MGI Symbol;Acc:MGI:88111]
ENSMUSG00000026511ENSMUST00000027792Srp911ForwardView as cDNA map |
View as Table
Internal |
Ensembl
signal recognition particle 9 [Source:MGI Symbol;Acc:MGI:1350930]
ENSMUSG00000026616ENSMUST00000082321Cr211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
complement receptor 2 [Source:MGI Symbol;Acc:MGI:88489]
ENSMUSG00000026640ENSMUST00000027952Plxna211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
plexin A2 [Source:MGI Symbol;Acc:MGI:107684]
ENSMUSG00000026667ENSMUST00000027979Uhmk111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
U2AF homology motif (UHM) kinase 1 [Source:MGI Symbol;Acc:MGI:1341908]
ENSMUSG00000026667ENSMUST00000150821Uhmk111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
U2AF homology motif (UHM) kinase 1 [Source:MGI Symbol;Acc:MGI:1341908]
ENSMUSG00000026673ENSMUST00000027984Sh2d1b111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
SH2 domain protein 1B1 [Source:MGI Symbol;Acc:MGI:1349420]
ENSMUSG00000026686ENSMUST00000028003Lmx1a11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
LIM homeobox transcription factor 1 alpha [Source:MGI Symbol;Acc:MGI:1888519]
ENSMUSG00000026686ENSMUST00000111377Lmx1a11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
LIM homeobox transcription factor 1 alpha [Source:MGI Symbol;Acc:MGI:1888519]
ENSMUSG00000037395ENSMUST00000073279Rcor311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
REST corepressor 3 [Source:MGI Symbol;Acc:MGI:2441920]
ENSMUSG00000038174ENSMUST00000161600Fam126b11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
family with sequence similarity 126, member B [Source:MGI Symbol;Acc:MGI:1098784]
ENSMUSG00000038235ENSMUST00000043839F11r11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
F11 receptor [Source:MGI Symbol;Acc:MGI:1321398]
ENSMUSG00000038608ENSMUST00000057520Dock1011ReverseView as cDNA map |
View as Table
Internal |
Ensembl
dedicator of cytokinesis 10 [Source:MGI Symbol;Acc:MGI:2146320]
ENSMUSG00000039239ENSMUST00000045288Tgfb211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
transforming growth factor, beta 2 [Source:MGI Symbol;Acc:MGI:98726]
ENSMUSG00000040297ENSMUST00000048377AI84810011ReverseView as cDNA map |
View as Table
Internal |
Ensembl
expressed sequence AI848100 [Source:MGI Symbol;Acc:MGI:2138346]
ENSMUSG00000041144ENSMUST00000094964Dnahc7b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
dynein, axonemal, heavy chain 7B [Source:MGI Symbol;Acc:MGI:2684953]
ENSMUSG00000042699ENSMUST00000042141Dhx911ReverseView as cDNA map |
View as Table
Internal |
Ensembl
DEAH (Asp-Glu-Ala-His) box polypeptide 9 [Source:MGI Symbol;Acc:MGI:108177]
ENSMUSG00000042751ENSMUST00000043313Nmnat211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
nicotinamide nucleotide adenylyltransferase 2 [Source:MGI Symbol;Acc:MGI:2444155]
ENSMUSG00000046828ENSMUST000000548014832428D23Rik11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA 4832428D23 gene [Source:MGI Symbol;Acc:MGI:2685837]
ENSMUSG00000058729ENSMUST00000085803Lin911ForwardView as cDNA map |
View as Table
Internal |
Ensembl
lin-9 homolog (C. elegans) [Source:MGI Symbol;Acc:MGI:1919818]
ENSMUSG00000060679ENSMUST00000164185Mrps911ForwardView as cDNA map |
View as Table
Internal |
Ensembl
mitochondrial ribosomal protein S9 [Source:MGI Symbol;Acc:MGI:1916777]
ENSMUSG00000063681ENSMUST00000059825Crb111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
crumbs homolog 1 (Drosophila) [Source:MGI Symbol;Acc:MGI:2136343]
ENSMUSG00000079658ENSMUST00000115352Tceb111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
transcription elongation factor B (SIII), polypeptide 1 [Source:MGI Symbol;Acc:MGI:1915173]
ENSMUSG00000004085ENSMUST00000135469B230120H23Rik12ForwardView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA B230120H23 gene [Source:MGI Symbol;Acc:MGI:2443258]
ENSMUSG00000005089ENSMUST00000080210Slc1a212ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 1 (glial high affinity glutamate transporter), member 2 [Source:MGI Symbol;Acc:MGI:101931]
ENSMUSG00000005089ENSMUST00000111211Slc1a212ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 1 (glial high affinity glutamate transporter), member 2 [Source:MGI Symbol;Acc:MGI:101931]
ENSMUSG00000007476ENSMUST00000095078Lrrc8a32ForwardView as cDNA map |
View as Table
Internal |
Ensembl
leucine rich repeat containing 8A [Source:MGI Symbol;Acc:MGI:2652847]
ENSMUSG00000007476ENSMUST00000113654Lrrc8a32ForwardView as cDNA map |
View as Table
Internal |
Ensembl
leucine rich repeat containing 8A [Source:MGI Symbol;Acc:MGI:2652847]
ENSMUSG00000009030ENSMUST00000009174Pdcl12ReverseView as cDNA map |
View as Table
Internal |
Ensembl
phosducin-like [Source:MGI Symbol;Acc:MGI:1914716]
ENSMUSG00000009030ENSMUST00000112940Pdcl12ReverseView as cDNA map |
View as Table
Internal |
Ensembl
phosducin-like [Source:MGI Symbol;Acc:MGI:1914716]
ENSMUSG00000009614ENSMUST00000102886Sardh12ReverseView as cDNA map |
View as Table
Internal |
Ensembl
sarcosine dehydrogenase [Source:MGI Symbol;Acc:MGI:2183102]
ENSMUSG00000026773ENSMUST00000028114Pfkfb322ReverseView as cDNA map |
View as Table
Internal |
Ensembl
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 [Source:MGI Symbol;Acc:MGI:2181202]
ENSMUSG00000026773ENSMUST00000049849Pfkfb312ReverseView as cDNA map |
View as Table
Internal |
Ensembl
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 [Source:MGI Symbol;Acc:MGI:2181202]
ENSMUSG00000026773ENSMUST00000100411Pfkfb312ReverseView as cDNA map |
View as Table
Internal |
Ensembl
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 [Source:MGI Symbol;Acc:MGI:2181202]
ENSMUSG00000026773ENSMUST00000114844Pfkfb312ReverseView as cDNA map |
View as Table
Internal |
Ensembl
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 [Source:MGI Symbol;Acc:MGI:2181202]
ENSMUSG00000026773ENSMUST00000114845Pfkfb312ReverseView as cDNA map |
View as Table
Internal |
Ensembl
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 [Source:MGI Symbol;Acc:MGI:2181202]
ENSMUSG00000026773ENSMUST00000114846Pfkfb322ReverseView as cDNA map |
View as Table
Internal |
Ensembl
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 [Source:MGI Symbol;Acc:MGI:2181202]
ENSMUSG00000026773ENSMUST00000170196Pfkfb312ReverseView as cDNA map |
View as Table
Internal |
Ensembl
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 [Source:MGI Symbol;Acc:MGI:2181202]
ENSMUSG00000026773ENSMUST00000171188Pfkfb312ReverseView as cDNA map |
View as Table
Internal |
Ensembl
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 [Source:MGI Symbol;Acc:MGI:2181202]
ENSMUSG00000026834ENSMUST00000028178Acvr1c12ReverseView as cDNA map |
View as Table
Internal |
Ensembl
activin A receptor, type IC [Source:MGI Symbol;Acc:MGI:2661081]
ENSMUSG00000026870ENSMUST00000028228D730039F16Rik22ForwardView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA D730039F16 gene [Source:MGI Symbol;Acc:MGI:1925246]
ENSMUSG00000026870ENSMUST00000113068D730039F16Rik22ForwardView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA D730039F16 gene [Source:MGI Symbol;Acc:MGI:1925246]
ENSMUSG00000026870ENSMUST00000168663D730039F16Rik22ForwardView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA D730039F16 gene [Source:MGI Symbol;Acc:MGI:1925246]
ENSMUSG00000026889ENSMUST00000028251Rbm1812ReverseView as cDNA map |
View as Table
Internal |
Ensembl
RNA binding motif protein 18 [Source:MGI Symbol;Acc:MGI:1915139]
ENSMUSG00000027009ENSMUST00000028395Itga412ForwardView as cDNA map |
View as Table
Internal |
Ensembl
integrin alpha 4 [Source:MGI Symbol;Acc:MGI:96603]
ENSMUSG00000027009ENSMUST00000099972Itga412ForwardView as cDNA map |
View as Table
Internal |
Ensembl
integrin alpha 4 [Source:MGI Symbol;Acc:MGI:96603]
ENSMUSG00000027016ENSMUST00000111830Zfp385b12ReverseView as cDNA map |
View as Table
Internal |
Ensembl
zinc finger protein 385B [Source:MGI Symbol;Acc:MGI:2444734]
ENSMUSG00000027111ENSMUST00000112101Itga612ForwardView as cDNA map |
View as Table
Internal |
Ensembl
integrin alpha 6 [Source:MGI Symbol;Acc:MGI:96605]
ENSMUSG00000027167ENSMUST00000122965Elp412ReverseView as cDNA map |
View as Table
Internal |
Ensembl
elongation protein 4 homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1925016]
ENSMUSG00000027177ENSMUST00000028600Hipk312ReverseView as cDNA map |
View as Table
Internal |
Ensembl
homeodomain interacting protein kinase 3 [Source:MGI Symbol;Acc:MGI:1314882]
ENSMUSG00000027177ENSMUST00000111124Hipk312ReverseView as cDNA map |
View as Table
Internal |
Ensembl
homeodomain interacting protein kinase 3 [Source:MGI Symbol;Acc:MGI:1314882]
ENSMUSG00000027177ENSMUST00000111125Hipk312ReverseView as cDNA map |
View as Table
Internal |
Ensembl
homeodomain interacting protein kinase 3 [Source:MGI Symbol;Acc:MGI:1314882]
ENSMUSG00000027357ENSMUST00000028835Crls112ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cardiolipin synthase 1 [Source:MGI Symbol;Acc:MGI:1913836]
ENSMUSG00000027366ENSMUST000000288442010106G01Rik12ReverseView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA 2010106G01 gene [Source:MGI Symbol;Acc:MGI:1913802]
ENSMUSG00000027366ENSMUST000001437002010106G01Rik12ReverseView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA 2010106G01 gene [Source:MGI Symbol;Acc:MGI:1913802]
ENSMUSG00000027427ENSMUST00000110017Polr3f12ForwardView as cDNA map |
View as Table
Internal |
Ensembl
polymerase (RNA) III (DNA directed) polypeptide F [Source:MGI Symbol;Acc:MGI:1924086]
ENSMUSG00000027650ENSMUST00000029179Tti112ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Tel2 interacting protein 1 homolog (S. pombe) [Source:MGI Symbol;Acc:MGI:1922675]
ENSMUSG00000027650ENSMUST00000109522Tti112ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Tel2 interacting protein 1 homolog (S. pombe) [Source:MGI Symbol;Acc:MGI:1922675]
ENSMUSG00000033943ENSMUST00000079934Mga12ForwardView as cDNA map |
View as Table
Internal |
Ensembl
MAX gene associated [Source:MGI Symbol;Acc:MGI:1352483]
ENSMUSG00000033943ENSMUST00000110773Mga12ForwardView as cDNA map |
View as Table
Internal |
Ensembl
MAX gene associated [Source:MGI Symbol;Acc:MGI:1352483]
ENSMUSG00000033943ENSMUST00000110774Mga12ForwardView as cDNA map |
View as Table
Internal |
Ensembl
MAX gene associated [Source:MGI Symbol;Acc:MGI:1352483]
ENSMUSG00000035236ENSMUST00000038874Scai12ReverseView as cDNA map |
View as Table
Internal |
Ensembl
suppressor of cancer cell invasion [Source:MGI Symbol;Acc:MGI:2443716]
ENSMUSG00000035778ENSMUST00000044255Ggta112ReverseView as cDNA map |
View as Table
Internal |
Ensembl
glycoprotein galactosyltransferase alpha 1, 3 [Source:MGI Symbol;Acc:MGI:95704]
ENSMUSG00000035778ENSMUST00000079424Ggta112ReverseView as cDNA map |
View as Table
Internal |
Ensembl
glycoprotein galactosyltransferase alpha 1, 3 [Source:MGI Symbol;Acc:MGI:95704]
ENSMUSG00000035778ENSMUST00000102794Ggta112ReverseView as cDNA map |
View as Table
Internal |
Ensembl
glycoprotein galactosyltransferase alpha 1, 3 [Source:MGI Symbol;Acc:MGI:95704]
ENSMUSG00000035778ENSMUST00000113000Ggta112ReverseView as cDNA map |
View as Table
Internal |
Ensembl
glycoprotein galactosyltransferase alpha 1, 3 [Source:MGI Symbol;Acc:MGI:95704]
ENSMUSG00000035778ENSMUST00000113001Ggta112ReverseView as cDNA map |
View as Table
Internal |
Ensembl
glycoprotein galactosyltransferase alpha 1, 3 [Source:MGI Symbol;Acc:MGI:95704]
ENSMUSG00000035778ENSMUST00000113002Ggta112ReverseView as cDNA map |
View as Table
Internal |
Ensembl
glycoprotein galactosyltransferase alpha 1, 3 [Source:MGI Symbol;Acc:MGI:95704]
ENSMUSG00000035778ENSMUST00000131745Ggta112ReverseView as cDNA map |
View as Table
Internal |
Ensembl
glycoprotein galactosyltransferase alpha 1, 3 [Source:MGI Symbol;Acc:MGI:95704]
ENSMUSG00000035778ENSMUST00000164561Ggta112ReverseView as cDNA map |
View as Table
Internal |
Ensembl
glycoprotein galactosyltransferase alpha 1, 3 [Source:MGI Symbol;Acc:MGI:95704]
ENSMUSG00000035778ENSMUST00000164889Ggta112ReverseView as cDNA map |
View as Table
Internal |
Ensembl
glycoprotein galactosyltransferase alpha 1, 3 [Source:MGI Symbol;Acc:MGI:95704]
ENSMUSG00000035778ENSMUST00000171846Ggta112ReverseView as cDNA map |
View as Table
Internal |
Ensembl
glycoprotein galactosyltransferase alpha 1, 3 [Source:MGI Symbol;Acc:MGI:95704]
ENSMUSG00000036641ENSMUST00000077687Ccdc14812ReverseView as cDNA map |
View as Table
Internal |
Ensembl
coiled-coil domain containing 148 [Source:MGI Symbol;Acc:MGI:3039583]
ENSMUSG00000038375ENSMUST00000043237Trp53inp212ForwardView as cDNA map |
View as Table
Internal |
Ensembl
transformation related protein 53 inducible nuclear protein 2 [Source:MGI Symbol;Acc:MGI:1915978]
ENSMUSG00000040084ENSMUST00000038341Bub1b12ForwardView as cDNA map |
View as Table
Internal |
Ensembl
budding uninhibited by benzimidazoles 1 homolog, beta (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1333889]
ENSMUSG00000040549ENSMUST00000099716Ckap512ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cytoskeleton associated protein 5 [Source:MGI Symbol;Acc:MGI:1923036]
ENSMUSG00000040549ENSMUST00000111338Ckap512ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cytoskeleton associated protein 5 [Source:MGI Symbol;Acc:MGI:1923036]
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We gratefully acknowledge support of this work by the William M. Keck Foundation