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Genome: Mus Musculus | mRNA | miRBase 18 (Nov. 2011), ENSEMBL 65 (Dec. 2011) and RNA22v2.0
Description: List of transcripts that are targeted by all of the below miRNA identifiers simultaneously
miRNA's: mmu-miR-1196-5p (MIMAT0005857)
Filtering By: Base pair min value: 12 | Folding energy max value (Kcal/mol): -12 | Min miRNA targets: 1 | Max p-value: .1


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Gene IDTranscript IDCommon Gene Name# of miRNA targets
for specified miRNAs
ChromosomeStrand DirectionTranscript Link to view miRNA target predictionsGene LinkDescription
ENSMUSG00000002881ENSMUST00000069792Nab111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ngfi-A binding protein 1 [Source:MGI Symbol;Acc:MGI:107564]
ENSMUSG00000009418ENSMUST00000040599Nav111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
neuron navigator 1 [Source:MGI Symbol;Acc:MGI:2183683]
ENSMUSG00000013698ENSMUST00000013842Pea15a11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
phosphoprotein enriched in astrocytes 15A [Source:MGI Symbol;Acc:MGI:104799]
ENSMUSG00000015222ENSMUST00000114013Mtap211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
ENSMUSG00000015314ENSMUST00000171330Slamf611ForwardView as cDNA map |
View as Table
Internal |
Ensembl
SLAM family member 6 [Source:MGI Symbol;Acc:MGI:1353620]
ENSMUSG00000016200ENSMUST00000016344Syt1411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
synaptotagmin XIV [Source:MGI Symbol;Acc:MGI:2444490]
ENSMUSG00000016200ENSMUST00000164191Syt1411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
synaptotagmin XIV [Source:MGI Symbol;Acc:MGI:2444490]
ENSMUSG00000018196ENSMUST00000129653Glrx211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
glutaredoxin 2 (thioltransferase) [Source:MGI Symbol;Acc:MGI:1916617]
ENSMUSG00000025776ENSMUST00000095075Crispld111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cysteine-rich secretory protein LCCL domain containing 1 [Source:MGI Symbol;Acc:MGI:1934666]
ENSMUSG00000025921ENSMUST00000027053Rdh1011ForwardView as cDNA map |
View as Table
Internal |
Ensembl
retinol dehydrogenase 10 (all-trans) [Source:MGI Symbol;Acc:MGI:1924238]
ENSMUSG00000025937ENSMUST00000027071Lactb211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
lactamase, beta 2 [Source:MGI Symbol;Acc:MGI:2442551]
ENSMUSG00000025979ENSMUST00000162364Mob411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
MOB family member 4, phocein [Source:MGI Symbol;Acc:MGI:104899]
ENSMUSG00000025982ENSMUST00000027127Sf3b111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
splicing factor 3b, subunit 1 [Source:MGI Symbol;Acc:MGI:1932339]
ENSMUSG00000025991ENSMUST00000027144Cps111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
carbamoyl-phosphate synthetase 1 [Source:MGI Symbol;Acc:MGI:891996]
ENSMUSG00000026028ENSMUST00000027186Trak211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
trafficking protein, kinesin binding 2 [Source:MGI Symbol;Acc:MGI:1918077]
ENSMUSG00000026083ENSMUST00000027252Eif5b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
eukaryotic translation initiation factor 5B [Source:MGI Symbol;Acc:MGI:2441772]
ENSMUSG00000026098ENSMUST00000027267Pms111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
postmeiotic segregation increased 1 (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1202302]
ENSMUSG00000026104ENSMUST00000070968Stat111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
signal transducer and activator of transcription 1 [Source:MGI Symbol;Acc:MGI:103063]
ENSMUSG00000026131ENSMUST00000097785Dst11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
dystonin [Source:MGI Symbol;Acc:MGI:104627]
ENSMUSG00000026149ENSMUST00000027331Tm4sf2011ReverseView as cDNA map |
View as Table
Internal |
Ensembl
transmembrane 4 L six family member 20 [Source:MGI Symbol;Acc:MGI:1913511]
ENSMUSG00000026177ENSMUST00000027368Slc11a111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1 [Source:MGI Symbol;Acc:MGI:1345275]
ENSMUSG00000026198ENSMUST00000027396Abcb611ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ATP-binding cassette, sub-family B (MDR/TAP), member 6 [Source:MGI Symbol;Acc:MGI:1921354]
ENSMUSG00000026234ENSMUST00000027438Ncl21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
nucleolin [Source:MGI Symbol;Acc:MGI:97286]
ENSMUSG00000026251ENSMUST00000073252Chrnd11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cholinergic receptor, nicotinic, delta polypeptide [Source:MGI Symbol;Acc:MGI:87893]
ENSMUSG00000026289ENSMUST00000027512Atg16l111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
autophagy-related 16-like 1 (yeast) [Source:MGI Symbol;Acc:MGI:1924290]
ENSMUSG00000026289ENSMUST00000113186Atg16l111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
autophagy-related 16-like 1 (yeast) [Source:MGI Symbol;Acc:MGI:1924290]
ENSMUSG00000026393ENSMUST00000027642Nek711ReverseView as cDNA map |
View as Table
Internal |
Ensembl
NIMA (never in mitosis gene a)-related expressed kinase 7 [Source:MGI Symbol;Acc:MGI:1890645]
ENSMUSG00000026425ENSMUST00000027683Srgap211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
SLIT-ROBO Rho GTPase activating protein 2 [Source:MGI Symbol;Acc:MGI:109605]
ENSMUSG00000026425ENSMUST00000097588Srgap211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
SLIT-ROBO Rho GTPase activating protein 2 [Source:MGI Symbol;Acc:MGI:109605]
ENSMUSG00000026437ENSMUST00000027697Cdk1811ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cyclin-dependent kinase 18 [Source:MGI Symbol;Acc:MGI:97518]
ENSMUSG00000026464ENSMUST00000027736Zc3h11a11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
zinc finger CCCH type containing 11A [Source:MGI Symbol;Acc:MGI:1917829]
ENSMUSG00000026490ENSMUST00000111116Cdc42bpa11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
CDC42 binding protein kinase alpha [Source:MGI Symbol;Acc:MGI:2441841]
ENSMUSG00000026532ENSMUST00000027817Spna111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
spectrin alpha 1 [Source:MGI Symbol;Acc:MGI:98385]
ENSMUSG00000026589ENSMUST00000027881Sec16b21ForwardView as cDNA map |
View as Table
Internal |
Ensembl
SEC16 homolog B (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2148802]
ENSMUSG00000026589ENSMUST00000086130Sec16b21ForwardView as cDNA map |
View as Table
Internal |
Ensembl
SEC16 homolog B (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2148802]
ENSMUSG00000026589ENSMUST00000111700Sec16b21ForwardView as cDNA map |
View as Table
Internal |
Ensembl
SEC16 homolog B (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2148802]
ENSMUSG00000026596ENSMUST00000166172Abl211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
v-abl Abelson murine leukemia viral oncogene homolog 2 (arg, Abelson-related gene) [Source:MGI Symbol;Acc:MGI:87860]
ENSMUSG00000026604ENSMUST00000027898Ptpn1411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
protein tyrosine phosphatase, non-receptor type 14 [Source:MGI Symbol;Acc:MGI:102467]
ENSMUSG00000026604ENSMUST00000097442Ptpn1411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
protein tyrosine phosphatase, non-receptor type 14 [Source:MGI Symbol;Acc:MGI:102467]
ENSMUSG00000026610ENSMUST00000027906Esrrg11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
estrogen-related receptor gamma [Source:MGI Symbol;Acc:MGI:1347056]
ENSMUSG00000026610ENSMUST00000110938Esrrg11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
estrogen-related receptor gamma [Source:MGI Symbol;Acc:MGI:1347056]
ENSMUSG00000026610ENSMUST00000110939Esrrg11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
estrogen-related receptor gamma [Source:MGI Symbol;Acc:MGI:1347056]
ENSMUSG00000026618ENSMUST00000027921Iars211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
isoleucine-tRNA synthetase 2, mitochondrial [Source:MGI Symbol;Acc:MGI:1919586]
ENSMUSG00000026638ENSMUST00000076521Irf611ForwardView as cDNA map |
View as Table
Internal |
Ensembl
interferon regulatory factor 6 [Source:MGI Symbol;Acc:MGI:1859211]
ENSMUSG00000026686ENSMUST00000028003Lmx1a11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
LIM homeobox transcription factor 1 alpha [Source:MGI Symbol;Acc:MGI:1888519]
ENSMUSG00000026686ENSMUST00000111377Lmx1a11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
LIM homeobox transcription factor 1 alpha [Source:MGI Symbol;Acc:MGI:1888519]
ENSMUSG00000026692ENSMUST00000111525Fmo411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
flavin containing monooxygenase 4 [Source:MGI Symbol;Acc:MGI:2429497]
ENSMUSG00000026725ENSMUST00000039178Tnn21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
tenascin N [Source:MGI Symbol;Acc:MGI:2665790]
ENSMUSG00000027520ENSMUST00000114132Zdbf211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
zinc finger, DBF-type containing 2 [Source:MGI Symbol;Acc:MGI:1921134]
ENSMUSG00000031506ENSMUST00000049449Ptpn711ForwardView as cDNA map |
View as Table
Internal |
Ensembl
protein tyrosine phosphatase, non-receptor type 7 [Source:MGI Symbol;Acc:MGI:2156893]
ENSMUSG00000031506ENSMUST00000167080Ptpn711ForwardView as cDNA map |
View as Table
Internal |
Ensembl
protein tyrosine phosphatase, non-receptor type 7 [Source:MGI Symbol;Acc:MGI:2156893]
ENSMUSG00000033257ENSMUST00000042125Ttll411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
tubulin tyrosine ligase-like family, member 4 [Source:MGI Symbol;Acc:MGI:1914784]
ENSMUSG00000033722ENSMUST00000035914BC03409011ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cDNA sequence BC034090 [Source:MGI Symbol;Acc:MGI:2672904]
ENSMUSG00000034353ENSMUST00000097648Ramp111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
receptor (calcitonin) activity modifying protein 1 [Source:MGI Symbol;Acc:MGI:1858418]
ENSMUSG00000037503ENSMUST00000047534Fam168b11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
family with sequence similarity 168, member B [Source:MGI Symbol;Acc:MGI:2448487]
ENSMUSG00000037509ENSMUST00000159747Arhgef421ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Rho guanine nucleotide exchange factor (GEF) 4 [Source:MGI Symbol;Acc:MGI:2442507]
ENSMUSG00000038174ENSMUST00000161600Fam126b11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
family with sequence similarity 126, member B [Source:MGI Symbol;Acc:MGI:1098784]
ENSMUSG00000038421ENSMUST00000159171Fcrla11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Fc receptor-like A [Source:MGI Symbol;Acc:MGI:2138647]
ENSMUSG00000038793ENSMUST00000037361Lefty111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
left right determination factor 1 [Source:MGI Symbol;Acc:MGI:107405]
ENSMUSG00000039377ENSMUST00000048572Hlx11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
H2.0-like homeobox [Source:MGI Symbol;Acc:MGI:96109]
ENSMUSG00000039384ENSMUST00000048655Dusp1011ForwardView as cDNA map |
View as Table
Internal |
Ensembl
dual specificity phosphatase 10 [Source:MGI Symbol;Acc:MGI:1927070]
ENSMUSG00000040297ENSMUST00000048377AI84810011ReverseView as cDNA map |
View as Table
Internal |
Ensembl
expressed sequence AI848100 [Source:MGI Symbol;Acc:MGI:2138346]
ENSMUSG00000040836ENSMUST00000111450Gpr16111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
G protein-coupled receptor 161 [Source:MGI Symbol;Acc:MGI:2685054]
ENSMUSG00000040848ENSMUST00000043338Sft2d211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
SFT2 domain containing 2 [Source:MGI Symbol;Acc:MGI:1917362]
ENSMUSG00000041075ENSMUST00000037105Fzd711ForwardView as cDNA map |
View as Table
Internal |
Ensembl
frizzled homolog 7 (Drosophila) [Source:MGI Symbol;Acc:MGI:108570]
ENSMUSG00000041075ENSMUST00000114246Fzd711ForwardView as cDNA map |
View as Table
Internal |
Ensembl
frizzled homolog 7 (Drosophila) [Source:MGI Symbol;Acc:MGI:108570]
ENSMUSG00000041889ENSMUST00000041240Shisa411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
shisa homolog 4 (Xenopus laevis) [Source:MGI Symbol;Acc:MGI:1924802]
ENSMUSG00000041907ENSMUST00000114761Gpr4511ForwardView as cDNA map |
View as Table
Internal |
Ensembl
G protein-coupled receptor 45 [Source:MGI Symbol;Acc:MGI:2135882]
ENSMUSG00000042429ENSMUST00000038191Adora111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
adenosine A1 receptor [Source:MGI Symbol;Acc:MGI:99401]
ENSMUSG00000042429ENSMUST00000086465Adora111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
adenosine A1 receptor [Source:MGI Symbol;Acc:MGI:99401]
ENSMUSG00000042671ENSMUST00000041776Rgs821ForwardView as cDNA map |
View as Table
Internal |
Ensembl
regulator of G-protein signaling 8 [Source:MGI Symbol;Acc:MGI:108408]
ENSMUSG00000042671ENSMUST00000111810Rgs821ForwardView as cDNA map |
View as Table
Internal |
Ensembl
regulator of G-protein signaling 8 [Source:MGI Symbol;Acc:MGI:108408]
ENSMUSG00000042671ENSMUST00000111812Rgs821ForwardView as cDNA map |
View as Table
Internal |
Ensembl
regulator of G-protein signaling 8 [Source:MGI Symbol;Acc:MGI:108408]
ENSMUSG00000042807ENSMUST00000087659Hecw211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 [Source:MGI Symbol;Acc:MGI:2685817]
ENSMUSG00000043019ENSMUST00000059498Edem311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
ER degradation enhancer, mannosidase alpha-like 3 [Source:MGI Symbol;Acc:MGI:1914217]
ENSMUSG00000044337ENSMUST00000065587Cxcr711ForwardView as cDNA map |
View as Table
Internal |
Ensembl
chemokine (C-X-C motif) receptor 7 [Source:MGI Symbol;Acc:MGI:109562]
ENSMUSG00000046337ENSMUST00000170295Fam178b11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
family with sequence similarity 178, member B [Source:MGI Symbol;Acc:MGI:3026913]
ENSMUSG00000046404ENSMUST00000049813Yod111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
YOD1 OTU deubiquitinating enzyme 1 homologue (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2442596]
ENSMUSG00000049439ENSMUST00000060608Cyp20a111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cytochrome P450, family 20, subfamily A, polypeptide 1 [Source:MGI Symbol;Acc:MGI:1925201]
ENSMUSG00000051951ENSMUST00000070533Xkr411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
X Kell blood group precursor related family member 4 [Source:MGI Symbol;Acc:MGI:3528744]
ENSMUSG00000051998ENSMUST00000169295Lax111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
lymphocyte transmembrane adaptor 1 [Source:MGI Symbol;Acc:MGI:2443362]
ENSMUSG00000052062ENSMUST00000063725Pard3b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
par-3 partitioning defective 3 homolog B (C. elegans) [Source:MGI Symbol;Acc:MGI:1919301]
ENSMUSG00000053483ENSMUST00000149187Usp2111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ubiquitin specific peptidase 21 [Source:MGI Symbol;Acc:MGI:1353665]
ENSMUSG00000058267ENSMUST00000135680Mrps1411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
mitochondrial ribosomal protein S14 [Source:MGI Symbol;Acc:MGI:1928141]
ENSMUSG00000060244ENSMUST00000081527Refbp211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
RNA and export factor binding protein 2 [Source:MGI Symbol;Acc:MGI:1913144]
ENSMUSG00000061815ENSMUST00000127134Rufy411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
RUN and FYVE domain containing 4 [Source:MGI Symbol;Acc:MGI:3588214]
ENSMUSG00000061816ENSMUST00000027151Myl111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
myosin, light polypeptide 1 [Source:MGI Symbol;Acc:MGI:97269]
ENSMUSG00000061816ENSMUST00000119429Myl111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
myosin, light polypeptide 1 [Source:MGI Symbol;Acc:MGI:97269]
ENSMUSG00000061816ENSMUST00000120415Myl111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
myosin, light polypeptide 1 [Source:MGI Symbol;Acc:MGI:97269]
ENSMUSG00000066800ENSMUST00000086209Rnasel11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent) [Source:MGI Symbol;Acc:MGI:1098272]
ENSMUSG00000067158ENSMUST00000087027Col4a411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
collagen, type IV, alpha 4 [Source:MGI Symbol;Acc:MGI:104687]
ENSMUSG00000067158ENSMUST00000087050Col4a411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
collagen, type IV, alpha 4 [Source:MGI Symbol;Acc:MGI:104687]
ENSMUSG00000073664ENSMUST00000035550Nbeal111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neurobeachin like 1 [Source:MGI Symbol;Acc:MGI:2444343]
ENSMUSG00000073664ENSMUST00000035569Nbeal111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neurobeachin like 1 [Source:MGI Symbol;Acc:MGI:2444343]
ENSMUSG00000073664ENSMUST00000160834Nbeal111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neurobeachin like 1 [Source:MGI Symbol;Acc:MGI:2444343]
ENSMUSG00000073725ENSMUST00000095062Lmbrd111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
LMBR1 domain containing 1 [Source:MGI Symbol;Acc:MGI:1915671]
ENSMUSG00000090071ENSMUST00000160379Cdk5r211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cyclin-dependent kinase 5, regulatory subunit 2 (p39) [Source:MGI Symbol;Acc:MGI:1330828]
ENSMUSG00000092083ENSMUST00000171715Kcnb211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
potassium voltage gated channel, Shab-related subfamily, member 2 [Source:MGI Symbol;Acc:MGI:99632]
ENSMUSG00000000826ENSMUST00000072334Dnajc512ForwardView as cDNA map |
View as Table
Internal |
Ensembl
DnaJ (Hsp40) homolog, subfamily C, member 5 [Source:MGI Symbol;Acc:MGI:892995]
ENSMUSG00000000826ENSMUST00000108796Dnajc512ForwardView as cDNA map |
View as Table
Internal |
Ensembl
DnaJ (Hsp40) homolog, subfamily C, member 5 [Source:MGI Symbol;Acc:MGI:892995]
Please email us for questions and/or suggestions
GUI created by the Computational Medicine Center at the Sidney Kimmel Medical College of Thomas Jefferson University
We gratefully acknowledge support of this work by the William M. Keck Foundation