Back to main page

Genome: Mus Musculus | mRNA | miRBase 18 (Nov. 2011), ENSEMBL 65 (Dec. 2011) and RNA22v2.0
Description: List of transcripts that are targeted by all of the below miRNA identifiers simultaneously
miRNA's: mmu-miR-1839-3p (MIMAT0009457)
Filtering By: Base pair min value: 12 | Folding energy max value (Kcal/mol): -12 | Min miRNA targets: 1 | Max p-value: .1


Please hold, your search is in progress...
TIP! If you show ALL results, you'll be able to dynamically sort by one or multiple columns (hold shift)
TIP! You can save this HTML file locally by going to File->Save As if you want to access it quickly later on


Gene IDTranscript IDCommon Gene Name# of miRNA targets
for specified miRNAs
ChromosomeStrand DirectionTranscript Link to view miRNA target predictionsGene LinkDescription
ENSMUSG00000000817ENSMUST00000000834Fasl11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Fas ligand (TNF superfamily, member 6) [Source:MGI Symbol;Acc:MGI:99255]
ENSMUSG00000001138ENSMUST00000001166Cnnm311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cyclin M3 [Source:MGI Symbol;Acc:MGI:2151055]
ENSMUSG00000001143ENSMUST00000125304Lman2l11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
lectin, mannose-binding 2-like [Source:MGI Symbol;Acc:MGI:2443010]
ENSMUSG00000003721ENSMUST00000071064Insig211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
insulin induced gene 2 [Source:MGI Symbol;Acc:MGI:1920249]
ENSMUSG00000005338ENSMUST00000111220Cadm311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cell adhesion molecule 3 [Source:MGI Symbol;Acc:MGI:2137858]
ENSMUSG00000006301ENSMUST00000113796Tmbim111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
transmembrane BAX inhibitor motif containing 1 [Source:MGI Symbol;Acc:MGI:1916910]
ENSMUSG00000006403ENSMUST00000006570Adamts411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 4 [Source:MGI Symbol;Acc:MGI:1339949]
ENSMUSG00000006403ENSMUST00000111314Adamts411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 4 [Source:MGI Symbol;Acc:MGI:1339949]
ENSMUSG00000006403ENSMUST00000111315Adamts411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 4 [Source:MGI Symbol;Acc:MGI:1339949]
ENSMUSG00000006411ENSMUST00000006578Pvrl411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
poliovirus receptor-related 4 [Source:MGI Symbol;Acc:MGI:1918990]
ENSMUSG00000006411ENSMUST00000111286Pvrl411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
poliovirus receptor-related 4 [Source:MGI Symbol;Acc:MGI:1918990]
ENSMUSG00000007097ENSMUST00000085913Atp1a211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ATPase, Na+/K+ transporting, alpha 2 polypeptide [Source:MGI Symbol;Acc:MGI:88106]
ENSMUSG00000013973ENSMUST00000064950Dedd11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
death effector domain-containing [Source:MGI Symbol;Acc:MGI:1333874]
ENSMUSG00000013973ENSMUST00000111299Dedd11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
death effector domain-containing [Source:MGI Symbol;Acc:MGI:1333874]
ENSMUSG00000013973ENSMUST00000111300Dedd11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
death effector domain-containing [Source:MGI Symbol;Acc:MGI:1333874]
ENSMUSG00000015222ENSMUST00000024639Mtap211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
ENSMUSG00000015222ENSMUST00000077355Mtap211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
ENSMUSG00000015222ENSMUST00000114012Mtap211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
ENSMUSG00000015222ENSMUST00000114013Mtap211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
ENSMUSG00000015222ENSMUST00000114015Mtap211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
ENSMUSG00000015222ENSMUST00000114017Mtap211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
ENSMUSG00000015222ENSMUST00000114018Mtap211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
ENSMUSG00000015222ENSMUST00000171377Mtap211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
ENSMUSG00000015314ENSMUST00000015458Slamf611ForwardView as cDNA map |
View as Table
Internal |
Ensembl
SLAM family member 6 [Source:MGI Symbol;Acc:MGI:1353620]
ENSMUSG00000015314ENSMUST00000042184Slamf611ForwardView as cDNA map |
View as Table
Internal |
Ensembl
SLAM family member 6 [Source:MGI Symbol;Acc:MGI:1353620]
ENSMUSG00000015314ENSMUST00000171330Slamf611ForwardView as cDNA map |
View as Table
Internal |
Ensembl
SLAM family member 6 [Source:MGI Symbol;Acc:MGI:1353620]
ENSMUSG00000015316ENSMUST00000015460Slamf121ForwardView as cDNA map |
View as Table
Internal |
Ensembl
signaling lymphocytic activation molecule family member 1 [Source:MGI Symbol;Acc:MGI:1351314]
ENSMUSG00000015961ENSMUST00000016105Adss21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
adenylosuccinate synthetase, non muscle [Source:MGI Symbol;Acc:MGI:87948]
ENSMUSG00000016179ENSMUST00000016323Camk1g11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
calcium/calmodulin-dependent protein kinase I gamma [Source:MGI Symbol;Acc:MGI:2388073]
ENSMUSG00000016200ENSMUST00000016344Syt1411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
synaptotagmin XIV [Source:MGI Symbol;Acc:MGI:2444490]
ENSMUSG00000016200ENSMUST00000164191Syt1411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
synaptotagmin XIV [Source:MGI Symbol;Acc:MGI:2444490]
ENSMUSG00000025902ENSMUST00000027035Sox1711ReverseView as cDNA map |
View as Table
Internal |
Ensembl
SRY-box containing gene 17 [Source:MGI Symbol;Acc:MGI:107543]
ENSMUSG00000025911ENSMUST00000144177Adhfe111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
alcohol dehydrogenase, iron containing, 1 [Source:MGI Symbol;Acc:MGI:1923437]
ENSMUSG00000025921ENSMUST00000027053Rdh1011ForwardView as cDNA map |
View as Table
Internal |
Ensembl
retinol dehydrogenase 10 (all-trans) [Source:MGI Symbol;Acc:MGI:1924238]
ENSMUSG00000025935ENSMUST00000027068Tram111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
translocating chain-associating membrane protein 1 [Source:MGI Symbol;Acc:MGI:1919515]
ENSMUSG00000025949ENSMUST00000097707Pikfyve11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
phosphoinositide kinase, FYVE finger containing [Source:MGI Symbol;Acc:MGI:1335106]
ENSMUSG00000025969ENSMUST00000027112Nrp211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neuropilin 2 [Source:MGI Symbol;Acc:MGI:1100492]
ENSMUSG00000025969ENSMUST00000063594Nrp211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neuropilin 2 [Source:MGI Symbol;Acc:MGI:1100492]
ENSMUSG00000025969ENSMUST00000075144Nrp211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neuropilin 2 [Source:MGI Symbol;Acc:MGI:1100492]
ENSMUSG00000025969ENSMUST00000102822Nrp211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neuropilin 2 [Source:MGI Symbol;Acc:MGI:1100492]
ENSMUSG00000025969ENSMUST00000114155Nrp211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neuropilin 2 [Source:MGI Symbol;Acc:MGI:1100492]
ENSMUSG00000025969ENSMUST00000114157Nrp211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neuropilin 2 [Source:MGI Symbol;Acc:MGI:1100492]
ENSMUSG00000025980ENSMUST00000027123Hspd111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
heat shock protein 1 (chaperonin) [Source:MGI Symbol;Acc:MGI:96242]
ENSMUSG00000025983ENSMUST00000027128Ccdc15011ForwardView as cDNA map |
View as Table
Internal |
Ensembl
coiled-coil domain containing 150 [Source:MGI Symbol;Acc:MGI:1925266]
ENSMUSG00000026036ENSMUST00000064224Nif3l111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Ngg1 interacting factor 3-like 1 (S. pombe) [Source:MGI Symbol;Acc:MGI:1929485]
ENSMUSG00000026036ENSMUST00000087521Nif3l111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Ngg1 interacting factor 3-like 1 (S. pombe) [Source:MGI Symbol;Acc:MGI:1929485]
ENSMUSG00000026036ENSMUST00000114337Nif3l111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Ngg1 interacting factor 3-like 1 (S. pombe) [Source:MGI Symbol;Acc:MGI:1929485]
ENSMUSG00000026036ENSMUST00000171597Nif3l111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Ngg1 interacting factor 3-like 1 (S. pombe) [Source:MGI Symbol;Acc:MGI:1929485]
ENSMUSG00000026039ENSMUST00000027202Sgol211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
shugoshin-like 2 (S. pombe) [Source:MGI Symbol;Acc:MGI:1098767]
ENSMUSG00000026062ENSMUST00000027231Slc9a211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 9 (sodium/hydrogen exchanger), member 2 [Source:MGI Symbol;Acc:MGI:105075]
ENSMUSG00000026065ENSMUST00000027233Slc9a411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 9 (sodium/hydrogen exchanger), member 4 [Source:MGI Symbol;Acc:MGI:105074]
ENSMUSG00000026156ENSMUST00000063663B3gat221ForwardView as cDNA map |
View as Table
Internal |
Ensembl
beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) [Source:MGI Symbol;Acc:MGI:2389490]
ENSMUSG00000026173ENSMUST00000113749Plcd411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
phospholipase C, delta 4 [Source:MGI Symbol;Acc:MGI:107469]
ENSMUSG00000026179ENSMUST00000027370Pnkd11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
paroxysmal nonkinesiogenic dyskinesia [Source:MGI Symbol;Acc:MGI:1930773]
ENSMUSG00000026208ENSMUST00000027409Des11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
desmin [Source:MGI Symbol;Acc:MGI:94885]
ENSMUSG00000026229ENSMUST00000027432Psmd111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 [Source:MGI Symbol;Acc:MGI:1917497]
ENSMUSG00000026234ENSMUST00000027438Ncl11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
nucleolin [Source:MGI Symbol;Acc:MGI:97286]
ENSMUSG00000026271ENSMUST00000027489Gpr3511ForwardView as cDNA map |
View as Table
Internal |
Ensembl
G protein-coupled receptor 35 [Source:MGI Symbol;Acc:MGI:1929509]
ENSMUSG00000026271ENSMUST00000064480Gpr3511ForwardView as cDNA map |
View as Table
Internal |
Ensembl
G protein-coupled receptor 35 [Source:MGI Symbol;Acc:MGI:1929509]
ENSMUSG00000026271ENSMUST00000169198Gpr3511ForwardView as cDNA map |
View as Table
Internal |
Ensembl
G protein-coupled receptor 35 [Source:MGI Symbol;Acc:MGI:1929509]
ENSMUSG00000026274ENSMUST00000027493Pask11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
PAS domain containing serine/threonine kinase [Source:MGI Symbol;Acc:MGI:2155936]
ENSMUSG00000026305ENSMUST00000097649Lrrfip111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
leucine rich repeat (in FLII) interacting protein 1 [Source:MGI Symbol;Acc:MGI:1342770]
ENSMUSG00000026308ENSMUST00000027533Klhl3021ForwardView as cDNA map |
View as Table
Internal |
Ensembl
kelch-like 30 (Drosophila) [Source:MGI Symbol;Acc:MGI:1918038]
ENSMUSG00000026315ENSMUST00000000514Serpinb811ForwardView as cDNA map |
View as Table
Internal |
Ensembl
serine (or cysteine) peptidase inhibitor, clade B, member 8 [Source:MGI Symbol;Acc:MGI:894657]
ENSMUSG00000026315ENSMUST00000112706Serpinb811ForwardView as cDNA map |
View as Table
Internal |
Ensembl
serine (or cysteine) peptidase inhibitor, clade B, member 8 [Source:MGI Symbol;Acc:MGI:894657]
ENSMUSG00000026361ENSMUST00000018337Cdc7321ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2384876]
ENSMUSG00000026390ENSMUST00000027639Marco11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
macrophage receptor with collagenous structure [Source:MGI Symbol;Acc:MGI:1309998]
ENSMUSG00000026442ENSMUST00000043189Nfasc11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
neurofascin [Source:MGI Symbol;Acc:MGI:104753]
ENSMUSG00000026442ENSMUST00000094569Nfasc11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
neurofascin [Source:MGI Symbol;Acc:MGI:104753]
ENSMUSG00000026463ENSMUST00000048953Atp2b411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ATPase, Ca++ transporting, plasma membrane 4 [Source:MGI Symbol;Acc:MGI:88111]
ENSMUSG00000026463ENSMUST00000112264Atp2b411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ATPase, Ca++ transporting, plasma membrane 4 [Source:MGI Symbol;Acc:MGI:88111]
ENSMUSG00000026463ENSMUST00000125659Atp2b411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ATPase, Ca++ transporting, plasma membrane 4 [Source:MGI Symbol;Acc:MGI:88111]
ENSMUSG00000026463ENSMUST00000143567Atp2b411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ATPase, Ca++ transporting, plasma membrane 4 [Source:MGI Symbol;Acc:MGI:88111]
ENSMUSG00000026463ENSMUST00000165602Atp2b411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ATPase, Ca++ transporting, plasma membrane 4 [Source:MGI Symbol;Acc:MGI:88111]
ENSMUSG00000026464ENSMUST00000027736Zc3h11a11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
zinc finger CCCH type containing 11A [Source:MGI Symbol;Acc:MGI:1917829]
ENSMUSG00000026482ENSMUST00000027760Rgl111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ral guanine nucleotide dissociation stimulator,-like 1 [Source:MGI Symbol;Acc:MGI:107484]
ENSMUSG00000026482ENSMUST00000111857Rgl111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ral guanine nucleotide dissociation stimulator,-like 1 [Source:MGI Symbol;Acc:MGI:107484]
ENSMUSG00000026482ENSMUST00000111859Rgl111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ral guanine nucleotide dissociation stimulator,-like 1 [Source:MGI Symbol;Acc:MGI:107484]
ENSMUSG00000026490ENSMUST00000097450Cdc42bpa11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
CDC42 binding protein kinase alpha [Source:MGI Symbol;Acc:MGI:2441841]
ENSMUSG00000026491ENSMUST00000027768Ahctf111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
AT hook containing transcription factor 1 [Source:MGI Symbol;Acc:MGI:1915033]
ENSMUSG00000026554ENSMUST00000074144Dcaf811ForwardView as cDNA map |
View as Table
Internal |
Ensembl
DDB1 and CUL4 associated factor 8 [Source:MGI Symbol;Acc:MGI:91860]
ENSMUSG00000026564ENSMUST00000085992Dusp2711ReverseView as cDNA map |
View as Table
Internal |
Ensembl
dual specificity phosphatase 27 (putative) [Source:MGI Symbol;Acc:MGI:2685055]
ENSMUSG00000026589ENSMUST00000027881Sec16b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
SEC16 homolog B (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2148802]
ENSMUSG00000026589ENSMUST00000086130Sec16b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
SEC16 homolog B (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2148802]
ENSMUSG00000026589ENSMUST00000111700Sec16b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
SEC16 homolog B (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2148802]
ENSMUSG00000026609ENSMUST00000027905Ush2a11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Usher syndrome 2A (autosomal recessive, mild) homolog (human) [Source:MGI Symbol;Acc:MGI:1341292]
ENSMUSG00000026609ENSMUST00000060479Ush2a11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Usher syndrome 2A (autosomal recessive, mild) homolog (human) [Source:MGI Symbol;Acc:MGI:1341292]
ENSMUSG00000026622ENSMUST00000027931Nek211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
NIMA (never in mitosis gene a)-related expressed kinase 2 [Source:MGI Symbol;Acc:MGI:109359]
ENSMUSG00000026640ENSMUST00000027952Plxna221ForwardView as cDNA map |
View as Table
Internal |
Ensembl
plexin A2 [Source:MGI Symbol;Acc:MGI:107684]
ENSMUSG00000026694ENSMUST00000028017Mettl1321ReverseView as cDNA map |
View as Table
Internal |
Ensembl
methyltransferase like 13 [Source:MGI Symbol;Acc:MGI:1918699]
ENSMUSG00000027520ENSMUST00000029025Zdbf211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
zinc finger, DBF-type containing 2 [Source:MGI Symbol;Acc:MGI:1921134]
ENSMUSG00000027520ENSMUST00000114132Zdbf211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
zinc finger, DBF-type containing 2 [Source:MGI Symbol;Acc:MGI:1921134]
ENSMUSG00000028354ENSMUST00000030039Fmn211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
formin 2 [Source:MGI Symbol;Acc:MGI:1859252]
ENSMUSG00000028354ENSMUST00000165284Fmn211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
formin 2 [Source:MGI Symbol;Acc:MGI:1859252]
ENSMUSG00000032883ENSMUST00000035779Acsl311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
acyl-CoA synthetase long-chain family member 3 [Source:MGI Symbol;Acc:MGI:1921455]
ENSMUSG00000032883ENSMUST00000142704Acsl311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
acyl-CoA synthetase long-chain family member 3 [Source:MGI Symbol;Acc:MGI:1921455]
ENSMUSG00000033159ENSMUST000000412131810031K17Rik11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA 1810031K17 gene [Source:MGI Symbol;Acc:MGI:1916421]
ENSMUSG00000033159ENSMUST000000976951810031K17Rik11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA 1810031K17 gene [Source:MGI Symbol;Acc:MGI:1916421]
ENSMUSG00000033159ENSMUST000001687201810031K17Rik11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA 1810031K17 gene [Source:MGI Symbol;Acc:MGI:1916421]
ENSMUSG00000033684ENSMUST00000035325Qsox111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
quiescin Q6 sulfhydryl oxidase 1 [Source:MGI Symbol;Acc:MGI:1330818]
Please email us for questions and/or suggestions
GUI created by the Computational Medicine Center at the Sidney Kimmel Medical College of Thomas Jefferson University
We gratefully acknowledge support of this work by the William M. Keck Foundation