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Genome: Mus Musculus | mRNA | miRBase 18 (Nov. 2011), ENSEMBL 65 (Dec. 2011) and RNA22v2.0
Description: List of transcripts that are targeted by all of the below miRNA identifiers simultaneously
miRNA's: mmu-miR-3069-5p (MIMAT0014844)
Filtering By: Base pair min value: 12 | Folding energy max value (Kcal/mol): -12 | Min miRNA targets: 1 | Max p-value: .1


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Gene IDTranscript IDCommon Gene Name# of miRNA targets
for specified miRNAs
ChromosomeStrand DirectionTranscript Link to view miRNA target predictionsGene LinkDescription
ENSMUSG00000001138ENSMUST00000001166Cnnm321ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cyclin M3 [Source:MGI Symbol;Acc:MGI:2151055]
ENSMUSG00000001143ENSMUST00000115011Lman2l11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
lectin, mannose-binding 2-like [Source:MGI Symbol;Acc:MGI:2443010]
ENSMUSG00000001143ENSMUST00000125304Lman2l11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
lectin, mannose-binding 2-like [Source:MGI Symbol;Acc:MGI:2443010]
ENSMUSG00000001674ENSMUST00000001724Ddx1811ReverseView as cDNA map |
View as Table
Internal |
Ensembl
DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Source:MGI Symbol;Acc:MGI:1914192]
ENSMUSG00000003134ENSMUST00000054462Tbc1d811ReverseView as cDNA map |
View as Table
Internal |
Ensembl
TBC1 domain family, member 8 [Source:MGI Symbol;Acc:MGI:1927225]
ENSMUSG00000003135ENSMUST00000003219D1Bwg0212e11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
DNA segment, Chr 1, Brigham & Women's Genetics 0212 expressed [Source:MGI Symbol;Acc:MGI:106580]
ENSMUSG00000003135ENSMUST00000161515D1Bwg0212e11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
DNA segment, Chr 1, Brigham & Women's Genetics 0212 expressed [Source:MGI Symbol;Acc:MGI:106580]
ENSMUSG00000003458ENSMUST00000003550Ncstn11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
nicastrin [Source:MGI Symbol;Acc:MGI:1891700]
ENSMUSG00000003464ENSMUST00000075895Pex1911ForwardView as cDNA map |
View as Table
Internal |
Ensembl
peroxisomal biogenesis factor 19 [Source:MGI Symbol;Acc:MGI:1334458]
ENSMUSG00000003721ENSMUST00000003818Insig211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
insulin induced gene 2 [Source:MGI Symbol;Acc:MGI:1920249]
ENSMUSG00000003721ENSMUST00000071064Insig211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
insulin induced gene 2 [Source:MGI Symbol;Acc:MGI:1920249]
ENSMUSG00000003721ENSMUST00000159085Insig211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
insulin induced gene 2 [Source:MGI Symbol;Acc:MGI:1920249]
ENSMUSG00000003721ENSMUST00000160968Insig211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
insulin induced gene 2 [Source:MGI Symbol;Acc:MGI:1920249]
ENSMUSG00000004031ENSMUST00000004133Fam5b31ReverseView as cDNA map |
View as Table
Internal |
Ensembl
family with sequence similarity 5, member B [Source:MGI Symbol;Acc:MGI:2443333]
ENSMUSG00000004768ENSMUST00000088287Rab2311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
RAB23, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:99833]
ENSMUSG00000004768ENSMUST00000115174Rab2311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
RAB23, member RAS oncogene family [Source:MGI Symbol;Acc:MGI:99833]
ENSMUSG00000005338ENSMUST00000111220Cadm311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cell adhesion molecule 3 [Source:MGI Symbol;Acc:MGI:2137858]
ENSMUSG00000005501ENSMUST00000113153Usp4021ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ubiquitin specific peptidase 40 [Source:MGI Symbol;Acc:MGI:2443184]
ENSMUSG00000005763ENSMUST00000005907Cd24721ForwardView as cDNA map |
View as Table
Internal |
Ensembl
CD247 antigen [Source:MGI Symbol;Acc:MGI:88334]
ENSMUSG00000005763ENSMUST00000027849Cd24711ForwardView as cDNA map |
View as Table
Internal |
Ensembl
CD247 antigen [Source:MGI Symbol;Acc:MGI:88334]
ENSMUSG00000005763ENSMUST00000086002Cd24711ForwardView as cDNA map |
View as Table
Internal |
Ensembl
CD247 antigen [Source:MGI Symbol;Acc:MGI:88334]
ENSMUSG00000005763ENSMUST00000161559Cd24721ForwardView as cDNA map |
View as Table
Internal |
Ensembl
CD247 antigen [Source:MGI Symbol;Acc:MGI:88334]
ENSMUSG00000005763ENSMUST00000161971Cd24721ForwardView as cDNA map |
View as Table
Internal |
Ensembl
CD247 antigen [Source:MGI Symbol;Acc:MGI:88334]
ENSMUSG00000005886ENSMUST00000006037Ncoa221ReverseView as cDNA map |
View as Table
Internal |
Ensembl
nuclear receptor coactivator 2 [Source:MGI Symbol;Acc:MGI:1276533]
ENSMUSG00000005886ENSMUST00000068304Ncoa241ReverseView as cDNA map |
View as Table
Internal |
Ensembl
nuclear receptor coactivator 2 [Source:MGI Symbol;Acc:MGI:1276533]
ENSMUSG00000005886ENSMUST00000081713Ncoa241ReverseView as cDNA map |
View as Table
Internal |
Ensembl
nuclear receptor coactivator 2 [Source:MGI Symbol;Acc:MGI:1276533]
ENSMUSG00000006005ENSMUST00000064506Tpr21ForwardView as cDNA map |
View as Table
Internal |
Ensembl
translocated promoter region [Source:MGI Symbol;Acc:MGI:1922066]
ENSMUSG00000006005ENSMUST00000119161Tpr21ForwardView as cDNA map |
View as Table
Internal |
Ensembl
translocated promoter region [Source:MGI Symbol;Acc:MGI:1922066]
ENSMUSG00000006005ENSMUST00000124973Tpr11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
translocated promoter region [Source:MGI Symbol;Acc:MGI:1922066]
ENSMUSG00000006005ENSMUST00000151563Tpr11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
translocated promoter region [Source:MGI Symbol;Acc:MGI:1922066]
ENSMUSG00000006010ENSMUST00000094477BC00333111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cDNA sequence BC003331 [Source:MGI Symbol;Acc:MGI:2385108]
ENSMUSG00000006010ENSMUST00000111913BC00333111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cDNA sequence BC003331 [Source:MGI Symbol;Acc:MGI:2385108]
ENSMUSG00000006299ENSMUST00000006462Aamp11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
angio-associated migratory protein [Source:MGI Symbol;Acc:MGI:107809]
ENSMUSG00000006301ENSMUST00000113796Tmbim121ReverseView as cDNA map |
View as Table
Internal |
Ensembl
transmembrane BAX inhibitor motif containing 1 [Source:MGI Symbol;Acc:MGI:1916910]
ENSMUSG00000006412ENSMUST00000135941Pfdn211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
prefoldin 2 [Source:MGI Symbol;Acc:MGI:1276111]
ENSMUSG00000006576ENSMUST00000006751Slc4a311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 4 (anion exchanger), member 3 [Source:MGI Symbol;Acc:MGI:109350]
ENSMUSG00000006576ENSMUST00000027415Slc4a311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 4 (anion exchanger), member 3 [Source:MGI Symbol;Acc:MGI:109350]
ENSMUSG00000006576ENSMUST00000113545Slc4a311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 4 (anion exchanger), member 3 [Source:MGI Symbol;Acc:MGI:109350]
ENSMUSG00000006576ENSMUST00000124341Slc4a321ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 4 (anion exchanger), member 3 [Source:MGI Symbol;Acc:MGI:109350]
ENSMUSG00000008136ENSMUST00000008280Fhl221ReverseView as cDNA map |
View as Table
Internal |
Ensembl
four and a half LIM domains 2 [Source:MGI Symbol;Acc:MGI:1338762]
ENSMUSG00000008475ENSMUST00000077755Arpc511ForwardView as cDNA map |
View as Table
Internal |
Ensembl
actin related protein 2/3 complex, subunit 5 [Source:MGI Symbol;Acc:MGI:1915021]
ENSMUSG00000008475ENSMUST00000097536Arpc511ForwardView as cDNA map |
View as Table
Internal |
Ensembl
actin related protein 2/3 complex, subunit 5 [Source:MGI Symbol;Acc:MGI:1915021]
ENSMUSG00000009418ENSMUST00000040599Nav121ReverseView as cDNA map |
View as Table
Internal |
Ensembl
neuron navigator 1 [Source:MGI Symbol;Acc:MGI:2183683]
ENSMUSG00000010290ENSMUST00000010434AI59747911ForwardView as cDNA map |
View as Table
Internal |
Ensembl
expressed sequence AI597479 [Source:MGI Symbol;Acc:MGI:2138299]
ENSMUSG00000013593ENSMUST00000013737Ndufs211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
NADH dehydrogenase (ubiquinone) Fe-S protein 2 [Source:MGI Symbol;Acc:MGI:2385112]
ENSMUSG00000014602ENSMUST00000086819Kif1a21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
kinesin family member 1A [Source:MGI Symbol;Acc:MGI:108391]
ENSMUSG00000014602ENSMUST00000112958Kif1a21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
kinesin family member 1A [Source:MGI Symbol;Acc:MGI:108391]
ENSMUSG00000014602ENSMUST00000168448Kif1a11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
kinesin family member 1A [Source:MGI Symbol;Acc:MGI:108391]
ENSMUSG00000014602ENSMUST00000171556Kif1a21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
kinesin family member 1A [Source:MGI Symbol;Acc:MGI:108391]
ENSMUSG00000014602ENSMUST00000171796Kif1a21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
kinesin family member 1A [Source:MGI Symbol;Acc:MGI:108391]
ENSMUSG00000015222ENSMUST00000077355Mtap211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
ENSMUSG00000015222ENSMUST00000114012Mtap211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
ENSMUSG00000015222ENSMUST00000114015Mtap211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
ENSMUSG00000015222ENSMUST00000114017Mtap211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
ENSMUSG00000015222ENSMUST00000114018Mtap211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
ENSMUSG00000015222ENSMUST00000173855Mtap211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
ENSMUSG00000015314ENSMUST00000015458Slamf611ForwardView as cDNA map |
View as Table
Internal |
Ensembl
SLAM family member 6 [Source:MGI Symbol;Acc:MGI:1353620]
ENSMUSG00000015314ENSMUST00000042184Slamf611ForwardView as cDNA map |
View as Table
Internal |
Ensembl
SLAM family member 6 [Source:MGI Symbol;Acc:MGI:1353620]
ENSMUSG00000015314ENSMUST00000171330Slamf611ForwardView as cDNA map |
View as Table
Internal |
Ensembl
SLAM family member 6 [Source:MGI Symbol;Acc:MGI:1353620]
ENSMUSG00000015316ENSMUST00000015460Slamf111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
signaling lymphocytic activation molecule family member 1 [Source:MGI Symbol;Acc:MGI:1351314]
ENSMUSG00000015829ENSMUST00000040797Tnr11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
tenascin R [Source:MGI Symbol;Acc:MGI:99516]
ENSMUSG00000015961ENSMUST00000016105Adss11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
adenylosuccinate synthetase, non muscle [Source:MGI Symbol;Acc:MGI:87948]
ENSMUSG00000016181ENSMUST00000085555Diexf21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
digestive organ expansion factor homolog (zebrafish) [Source:MGI Symbol;Acc:MGI:2138080]
ENSMUSG00000016481ENSMUST00000027918Cr1l11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
complement component (3b/4b) receptor 1-like [Source:MGI Symbol;Acc:MGI:88513]
ENSMUSG00000016494ENSMUST00000016638Cd3411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
CD34 antigen [Source:MGI Symbol;Acc:MGI:88329]
ENSMUSG00000016494ENSMUST00000110815Cd3411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
CD34 antigen [Source:MGI Symbol;Acc:MGI:88329]
ENSMUSG00000016528ENSMUST00000016672Mapkapk211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
MAP kinase-activated protein kinase 2 [Source:MGI Symbol;Acc:MGI:109298]
ENSMUSG00000016529ENSMUST00000016673Il1021ForwardView as cDNA map |
View as Table
Internal |
Ensembl
interleukin 10 [Source:MGI Symbol;Acc:MGI:96537]
ENSMUSG00000016918ENSMUST00000088585Sulf131ForwardView as cDNA map |
View as Table
Internal |
Ensembl
sulfatase 1 [Source:MGI Symbol;Acc:MGI:2138563]
ENSMUSG00000018189ENSMUST00000018333Uchl511ForwardView as cDNA map |
View as Table
Internal |
Ensembl
ubiquitin carboxyl-terminal esterase L5 [Source:MGI Symbol;Acc:MGI:1914848]
ENSMUSG00000018199ENSMUST00000159879Trove221ReverseView as cDNA map |
View as Table
Internal |
Ensembl
TROVE domain family, member 2 [Source:MGI Symbol;Acc:MGI:106652]
ENSMUSG00000025776ENSMUST00000095075Crispld111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cysteine-rich secretory protein LCCL domain containing 1 [Source:MGI Symbol;Acc:MGI:1934666]
ENSMUSG00000025777ENSMUST00000026879Gdap111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
ganglioside-induced differentiation-associated-protein 1 [Source:MGI Symbol;Acc:MGI:1338002]
ENSMUSG00000025900ENSMUST00000027032Rp131ReverseView as cDNA map |
View as Table
Internal |
Ensembl
retinitis pigmentosa 1 (human) [Source:MGI Symbol;Acc:MGI:1341105]
ENSMUSG00000025900ENSMUST00000115540Rp131ReverseView as cDNA map |
View as Table
Internal |
Ensembl
retinitis pigmentosa 1 (human) [Source:MGI Symbol;Acc:MGI:1341105]
ENSMUSG00000025905ENSMUST00000027038Oprk111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
opioid receptor, kappa 1 [Source:MGI Symbol;Acc:MGI:97439]
ENSMUSG00000025905ENSMUST00000160339Oprk111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
opioid receptor, kappa 1 [Source:MGI Symbol;Acc:MGI:97439]
ENSMUSG00000025905ENSMUST00000160777Oprk111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
opioid receptor, kappa 1 [Source:MGI Symbol;Acc:MGI:97439]
ENSMUSG00000025909ENSMUST00000115488Sntg111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
syntrophin, gamma 1 [Source:MGI Symbol;Acc:MGI:1918346]
ENSMUSG00000025909ENSMUST00000132064Sntg111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
syntrophin, gamma 1 [Source:MGI Symbol;Acc:MGI:1918346]
ENSMUSG00000025909ENSMUST00000140295Sntg111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
syntrophin, gamma 1 [Source:MGI Symbol;Acc:MGI:1918346]
ENSMUSG00000025911ENSMUST00000144177Adhfe111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
alcohol dehydrogenase, iron containing, 1 [Source:MGI Symbol;Acc:MGI:1923437]
ENSMUSG00000025921ENSMUST00000027053Rdh1011ForwardView as cDNA map |
View as Table
Internal |
Ensembl
retinol dehydrogenase 10 (all-trans) [Source:MGI Symbol;Acc:MGI:1924238]
ENSMUSG00000025927ENSMUST00000027059Tcfap2b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
transcription factor AP-2 beta [Source:MGI Symbol;Acc:MGI:104672]
ENSMUSG00000025927ENSMUST00000064976Tcfap2b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
transcription factor AP-2 beta [Source:MGI Symbol;Acc:MGI:104672]
ENSMUSG00000025927ENSMUST00000166387Tcfap2b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
transcription factor AP-2 beta [Source:MGI Symbol;Acc:MGI:104672]
ENSMUSG00000025931ENSMUST00000068880Paqr811ForwardView as cDNA map |
View as Table
Internal |
Ensembl
progestin and adipoQ receptor family member VIII [Source:MGI Symbol;Acc:MGI:1921479]
ENSMUSG00000025932ENSMUST00000027066Eya121ReverseView as cDNA map |
View as Table
Internal |
Ensembl
eyes absent 1 homolog (Drosophila) [Source:MGI Symbol;Acc:MGI:109344]
ENSMUSG00000025932ENSMUST00000080664Eya121ReverseView as cDNA map |
View as Table
Internal |
Ensembl
eyes absent 1 homolog (Drosophila) [Source:MGI Symbol;Acc:MGI:109344]
ENSMUSG00000025932ENSMUST00000168081Eya111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
eyes absent 1 homolog (Drosophila) [Source:MGI Symbol;Acc:MGI:109344]
ENSMUSG00000025937ENSMUST00000027071Lactb211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
lactamase, beta 2 [Source:MGI Symbol;Acc:MGI:2442551]
ENSMUSG00000025945ENSMUST00000027082Crygf11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
crystallin, gamma F [Source:MGI Symbol;Acc:MGI:88526]
ENSMUSG00000025949ENSMUST00000097707Pikfyve31ForwardView as cDNA map |
View as Table
Internal |
Ensembl
phosphoinositide kinase, FYVE finger containing [Source:MGI Symbol;Acc:MGI:1335106]
ENSMUSG00000025956ENSMUST00000053469Mettl21a11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
methyltransferase like 21A [Source:MGI Symbol;Acc:MGI:1914349]
ENSMUSG00000025958ENSMUST00000049932Creb121ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cAMP responsive element binding protein 1 [Source:MGI Symbol;Acc:MGI:88494]
ENSMUSG00000025958ENSMUST00000087366Creb121ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cAMP responsive element binding protein 1 [Source:MGI Symbol;Acc:MGI:88494]
ENSMUSG00000025958ENSMUST00000171164Creb121ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cAMP responsive element binding protein 1 [Source:MGI Symbol;Acc:MGI:88494]
ENSMUSG00000025962ENSMUST00000027103Fastkd211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
FAST kinase domains 2 [Source:MGI Symbol;Acc:MGI:1922869]
ENSMUSG00000025963ENSMUST00000114094Mdh1b21ReverseView as cDNA map |
View as Table
Internal |
Ensembl
malate dehydrogenase 1B, NAD (soluble) [Source:MGI Symbol;Acc:MGI:1923918]
ENSMUSG00000025969ENSMUST00000027112Nrp211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neuropilin 2 [Source:MGI Symbol;Acc:MGI:1100492]
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We gratefully acknowledge support of this work by the William M. Keck Foundation