Back to main page

Genome: Mus Musculus | mRNA | miRBase 18 (Nov. 2011), ENSEMBL 65 (Dec. 2011) and RNA22v2.0
Description: List of transcripts that are targeted by all of the below miRNA identifiers simultaneously
miRNA's: mmu-miR-144-5p (MIMAT0016988)
Filtering By: Base pair min value: 12 | Folding energy max value (Kcal/mol): -12 | Min miRNA targets: 1 | Max p-value: .1


Please hold, your search is in progress...
TIP! If you show ALL results, you'll be able to dynamically sort by one or multiple columns (hold shift)
TIP! You can save this HTML file locally by going to File->Save As if you want to access it quickly later on


Gene IDTranscript IDCommon Gene Name# of miRNA targets
for specified miRNAs
ChromosomeStrand DirectionTranscript Link to view miRNA target predictionsGene LinkDescription
ENSMUSG00000000817ENSMUST00000000834Fasl11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Fas ligand (TNF superfamily, member 6) [Source:MGI Symbol;Acc:MGI:99255]
ENSMUSG00000001138ENSMUST00000001166Cnnm311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cyclin M3 [Source:MGI Symbol;Acc:MGI:2151055]
ENSMUSG00000003051ENSMUST00000003135Elf311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
E74-like factor 3 [Source:MGI Symbol;Acc:MGI:1101781]
ENSMUSG00000004364ENSMUST00000163119Cul311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cullin 3 [Source:MGI Symbol;Acc:MGI:1347360]
ENSMUSG00000008136ENSMUST00000008280Fhl211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
four and a half LIM domains 2 [Source:MGI Symbol;Acc:MGI:1338762]
ENSMUSG00000015222ENSMUST00000114013Mtap211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
microtubule-associated protein 2 [Source:MGI Symbol;Acc:MGI:97175]
ENSMUSG00000018196ENSMUST00000129653Glrx211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
glutaredoxin 2 (thioltransferase) [Source:MGI Symbol;Acc:MGI:1916617]
ENSMUSG00000023150ENSMUST00000023918Ivns1abp11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
influenza virus NS1A binding protein [Source:MGI Symbol;Acc:MGI:2152389]
ENSMUSG00000023150ENSMUST00000097543Ivns1abp11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
influenza virus NS1A binding protein [Source:MGI Symbol;Acc:MGI:2152389]
ENSMUSG00000025900ENSMUST00000027032Rp111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
retinitis pigmentosa 1 (human) [Source:MGI Symbol;Acc:MGI:1341105]
ENSMUSG00000025900ENSMUST00000115540Rp111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
retinitis pigmentosa 1 (human) [Source:MGI Symbol;Acc:MGI:1341105]
ENSMUSG00000025912ENSMUST00000088658Mybl111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
myeloblastosis oncogene-like 1 [Source:MGI Symbol;Acc:MGI:99925]
ENSMUSG00000025958ENSMUST00000049932Creb111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cAMP responsive element binding protein 1 [Source:MGI Symbol;Acc:MGI:88494]
ENSMUSG00000025958ENSMUST00000087366Creb111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cAMP responsive element binding protein 1 [Source:MGI Symbol;Acc:MGI:88494]
ENSMUSG00000025958ENSMUST00000171164Creb111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cAMP responsive element binding protein 1 [Source:MGI Symbol;Acc:MGI:88494]
ENSMUSG00000025962ENSMUST00000027103Fastkd211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
FAST kinase domains 2 [Source:MGI Symbol;Acc:MGI:1922869]
ENSMUSG00000025968ENSMUST00000027111Ndufs111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
NADH dehydrogenase (ubiquinone) Fe-S protein 1 [Source:MGI Symbol;Acc:MGI:2443241]
ENSMUSG00000025968ENSMUST00000168099Ndufs111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
NADH dehydrogenase (ubiquinone) Fe-S protein 1 [Source:MGI Symbol;Acc:MGI:2443241]
ENSMUSG00000025971ENSMUST000000271149430016H08Rik11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA 9430016H08 gene [Source:MGI Symbol;Acc:MGI:1915365]
ENSMUSG00000025978ENSMUST00000027121Rftn211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
raftlin family member 2 [Source:MGI Symbol;Acc:MGI:1921263]
ENSMUSG00000025997ENSMUST00000027146Ikzf211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
IKAROS family zinc finger 2 [Source:MGI Symbol;Acc:MGI:1342541]
ENSMUSG00000026031ENSMUST00000114313Cflar21ForwardView as cDNA map |
View as Table
Internal |
Ensembl
CASP8 and FADD-like apoptosis regulator [Source:MGI Symbol;Acc:MGI:1336166]
ENSMUSG00000026098ENSMUST00000027267Pms111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
postmeiotic segregation increased 1 (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1202302]
ENSMUSG00000026109ENSMUST00000081851Tmeff211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
transmembrane protein with EGF-like and two follistatin-like domains 2 [Source:MGI Symbol;Acc:MGI:1861735]
ENSMUSG00000026131ENSMUST00000097785Dst21ForwardView as cDNA map |
View as Table
Internal |
Ensembl
dystonin [Source:MGI Symbol;Acc:MGI:104627]
ENSMUSG00000026131ENSMUST00000097786Dst21ForwardView as cDNA map |
View as Table
Internal |
Ensembl
dystonin [Source:MGI Symbol;Acc:MGI:104627]
ENSMUSG00000026166ENSMUST00000113437Ccl2011ForwardView as cDNA map |
View as Table
Internal |
Ensembl
chemokine (C-C motif) ligand 20 [Source:MGI Symbol;Acc:MGI:1329031]
ENSMUSG00000026171ENSMUST00000027357Rnf2511ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ring finger protein 25 [Source:MGI Symbol;Acc:MGI:1890215]
ENSMUSG00000026171ENSMUST00000113721Rnf2511ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ring finger protein 25 [Source:MGI Symbol;Acc:MGI:1890215]
ENSMUSG00000026173ENSMUST00000027362Plcd411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
phospholipase C, delta 4 [Source:MGI Symbol;Acc:MGI:107469]
ENSMUSG00000026173ENSMUST00000113749Plcd411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
phospholipase C, delta 4 [Source:MGI Symbol;Acc:MGI:107469]
ENSMUSG00000026226ENSMUST00000052854Spata311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
spermatogenesis associated 3 [Source:MGI Symbol;Acc:MGI:1917310]
ENSMUSG00000026226ENSMUST00000130504Spata311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
spermatogenesis associated 3 [Source:MGI Symbol;Acc:MGI:1917310]
ENSMUSG00000026227ENSMUST000001658242810459M11Rik21ForwardView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA 2810459M11 gene [Source:MGI Symbol;Acc:MGI:1920042]
ENSMUSG00000026229ENSMUST00000027432Psmd121ForwardView as cDNA map |
View as Table
Internal |
Ensembl
proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 [Source:MGI Symbol;Acc:MGI:1917497]
ENSMUSG00000026238ENSMUST00000045897Ptma11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
prothymosin alpha [Source:MGI Symbol;Acc:MGI:97803]
ENSMUSG00000026247ENSMUST00000027463Ecel111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
endothelin converting enzyme-like 1 [Source:MGI Symbol;Acc:MGI:1343461]
ENSMUSG00000026247ENSMUST00000160810Ecel111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
endothelin converting enzyme-like 1 [Source:MGI Symbol;Acc:MGI:1343461]
ENSMUSG00000026247ENSMUST00000161002Ecel111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
endothelin converting enzyme-like 1 [Source:MGI Symbol;Acc:MGI:1343461]
ENSMUSG00000026254ENSMUST00000113236Eif4e211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
eukaryotic translation initiation factor 4E member 2 [Source:MGI Symbol;Acc:MGI:1914440]
ENSMUSG00000026275ENSMUST00000027494Ppp1r721ForwardView as cDNA map |
View as Table
Internal |
Ensembl
protein phosphatase 1, regulatory (inhibitor) subunit 7 [Source:MGI Symbol;Acc:MGI:1913635]
ENSMUSG00000026288ENSMUST00000042275Inpp5d11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
inositol polyphosphate-5-phosphatase D [Source:MGI Symbol;Acc:MGI:107357]
ENSMUSG00000026288ENSMUST00000072999Inpp5d11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
inositol polyphosphate-5-phosphatase D [Source:MGI Symbol;Acc:MGI:107357]
ENSMUSG00000026288ENSMUST00000168783Inpp5d11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
inositol polyphosphate-5-phosphatase D [Source:MGI Symbol;Acc:MGI:107357]
ENSMUSG00000026288ENSMUST00000169754Inpp5d11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
inositol polyphosphate-5-phosphatase D [Source:MGI Symbol;Acc:MGI:107357]
ENSMUSG00000026288ENSMUST00000170300Inpp5d11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
inositol polyphosphate-5-phosphatase D [Source:MGI Symbol;Acc:MGI:107357]
ENSMUSG00000026315ENSMUST00000000514Serpinb811ForwardView as cDNA map |
View as Table
Internal |
Ensembl
serine (or cysteine) peptidase inhibitor, clade B, member 8 [Source:MGI Symbol;Acc:MGI:894657]
ENSMUSG00000026315ENSMUST00000112706Serpinb811ForwardView as cDNA map |
View as Table
Internal |
Ensembl
serine (or cysteine) peptidase inhibitor, clade B, member 8 [Source:MGI Symbol;Acc:MGI:894657]
ENSMUSG00000026357ENSMUST00000027603Rgs1811ReverseView as cDNA map |
View as Table
Internal |
Ensembl
regulator of G-protein signaling 18 [Source:MGI Symbol;Acc:MGI:1927498]
ENSMUSG00000026380ENSMUST00000027629Tcfcp2l111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
transcription factor CP2-like 1 [Source:MGI Symbol;Acc:MGI:2444691]
ENSMUSG00000026443ENSMUST00000027706Lrrn211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
leucine rich repeat protein 2, neuronal [Source:MGI Symbol;Acc:MGI:106037]
ENSMUSG00000026456ENSMUST00000027726Cyb5r111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cytochrome b5 reductase 1 [Source:MGI Symbol;Acc:MGI:1919267]
ENSMUSG00000026463ENSMUST00000048953Atp2b411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ATPase, Ca++ transporting, plasma membrane 4 [Source:MGI Symbol;Acc:MGI:88111]
ENSMUSG00000026463ENSMUST00000112264Atp2b411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ATPase, Ca++ transporting, plasma membrane 4 [Source:MGI Symbol;Acc:MGI:88111]
ENSMUSG00000026463ENSMUST00000125659Atp2b411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ATPase, Ca++ transporting, plasma membrane 4 [Source:MGI Symbol;Acc:MGI:88111]
ENSMUSG00000026463ENSMUST00000143567Atp2b411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ATPase, Ca++ transporting, plasma membrane 4 [Source:MGI Symbol;Acc:MGI:88111]
ENSMUSG00000026463ENSMUST00000165602Atp2b411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ATPase, Ca++ transporting, plasma membrane 4 [Source:MGI Symbol;Acc:MGI:88111]
ENSMUSG00000026473ENSMUST00000086199Glul11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
glutamate-ammonia ligase (glutamine synthetase) [Source:MGI Symbol;Acc:MGI:95739]
ENSMUSG00000026494ENSMUST00000160789Kif26b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
kinesin family member 26B [Source:MGI Symbol;Acc:MGI:2447076]
ENSMUSG00000026494ENSMUST00000161017Kif26b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
kinesin family member 26B [Source:MGI Symbol;Acc:MGI:2447076]
ENSMUSG00000026502ENSMUST00000027783Pppde121ForwardView as cDNA map |
View as Table
Internal |
Ensembl
PPPDE peptidase domain containing 1 [Source:MGI Symbol;Acc:MGI:1926075]
ENSMUSG00000026502ENSMUST00000161075Pppde111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
PPPDE peptidase domain containing 1 [Source:MGI Symbol;Acc:MGI:1926075]
ENSMUSG00000026510ENSMUST00000117245Trp53bp211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
transformation related protein 53 binding protein 2 [Source:MGI Symbol;Acc:MGI:2138319]
ENSMUSG00000026523ENSMUST00000097457Wdr6411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
WD repeat domain 64 [Source:MGI Symbol;Acc:MGI:1923070]
ENSMUSG00000026523ENSMUST00000171939Wdr6411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
WD repeat domain 64 [Source:MGI Symbol;Acc:MGI:1923070]
ENSMUSG00000026565ENSMUST00000160260Pou2f121ReverseView as cDNA map |
View as Table
Internal |
Ensembl
POU domain, class 2, transcription factor 1 [Source:MGI Symbol;Acc:MGI:101898]
ENSMUSG00000026572ENSMUST00000027859Tbx1911ReverseView as cDNA map |
View as Table
Internal |
Ensembl
T-box 19 [Source:MGI Symbol;Acc:MGI:1891158]
ENSMUSG00000026587ENSMUST00000046110Astn111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
astrotactin 1 [Source:MGI Symbol;Acc:MGI:1098567]
ENSMUSG00000026596ENSMUST00000166172Abl211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
v-abl Abelson murine leukemia viral oncogene homolog 2 (arg, Abelson-related gene) [Source:MGI Symbol;Acc:MGI:87860]
ENSMUSG00000026604ENSMUST00000027898Ptpn1411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
protein tyrosine phosphatase, non-receptor type 14 [Source:MGI Symbol;Acc:MGI:102467]
ENSMUSG00000026604ENSMUST00000097442Ptpn1411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
protein tyrosine phosphatase, non-receptor type 14 [Source:MGI Symbol;Acc:MGI:102467]
ENSMUSG00000026692ENSMUST00000028014Fmo411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
flavin containing monooxygenase 4 [Source:MGI Symbol;Acc:MGI:2429497]
ENSMUSG00000026692ENSMUST00000111525Fmo411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
flavin containing monooxygenase 4 [Source:MGI Symbol;Acc:MGI:2429497]
ENSMUSG00000026721ENSMUST00000028049Rabgap1l11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
RAB GTPase activating protein 1-like [Source:MGI Symbol;Acc:MGI:1352507]
ENSMUSG00000033007ENSMUST00000037708Accn411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
amiloride-sensitive cation channel 4, pituitary [Source:MGI Symbol;Acc:MGI:2652846]
ENSMUSG00000033257ENSMUST00000042125Ttll411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
tubulin tyrosine ligase-like family, member 4 [Source:MGI Symbol;Acc:MGI:1914784]
ENSMUSG00000036251ENSMUST00000040210Trpm811ForwardView as cDNA map |
View as Table
Internal |
Ensembl
transient receptor potential cation channel, subfamily M, member 8 [Source:MGI Symbol;Acc:MGI:2181435]
ENSMUSG00000036251ENSMUST00000113114Trpm811ForwardView as cDNA map |
View as Table
Internal |
Ensembl
transient receptor potential cation channel, subfamily M, member 8 [Source:MGI Symbol;Acc:MGI:2181435]
ENSMUSG00000036251ENSMUST00000171176Trpm811ForwardView as cDNA map |
View as Table
Internal |
Ensembl
transient receptor potential cation channel, subfamily M, member 8 [Source:MGI Symbol;Acc:MGI:2181435]
ENSMUSG00000037375ENSMUST00000154755Hhat11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
hedgehog acyltransferase [Source:MGI Symbol;Acc:MGI:2444681]
ENSMUSG00000037434ENSMUST00000044954Slc30a111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 30 (zinc transporter), member 1 [Source:MGI Symbol;Acc:MGI:1345281]
ENSMUSG00000037503ENSMUST00000047534Fam168b11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
family with sequence similarity 168, member B [Source:MGI Symbol;Acc:MGI:2448487]
ENSMUSG00000037509ENSMUST00000047664Arhgef411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
Rho guanine nucleotide exchange factor (GEF) 4 [Source:MGI Symbol;Acc:MGI:2442507]
ENSMUSG00000038242ENSMUST00000040442Aox411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
aldehyde oxidase 4 [Source:MGI Symbol;Acc:MGI:1919122]
ENSMUSG00000038530ENSMUST00000027991Rgs411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
regulator of G-protein signaling 4 [Source:MGI Symbol;Acc:MGI:108409]
ENSMUSG00000038866ENSMUST00000118196Zcchc211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
zinc finger, CCHC domain containing 2 [Source:MGI Symbol;Acc:MGI:2444114]
ENSMUSG00000038949ENSMUST00000040706Cnst11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
consortin, connexin sorting protein [Source:MGI Symbol;Acc:MGI:2445141]
ENSMUSG00000039748ENSMUST00000039725Exo111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
exonuclease 1 [Source:MGI Symbol;Acc:MGI:1349427]
ENSMUSG00000040612ENSMUST00000111416Ildr211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
immunoglobulin-like domain containing receptor 2 [Source:MGI Symbol;Acc:MGI:1196370]
ENSMUSG00000040693ENSMUST00000071985Slco4c111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier organic anion transporter family, member 4C1 [Source:MGI Symbol;Acc:MGI:2442784]
ENSMUSG00000040865ENSMUST00000133236Ino80d11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
INO80 complex subunit D [Source:MGI Symbol;Acc:MGI:3027003]
ENSMUSG00000040918ENSMUST00000044021Slc19a211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 19 (thiamine transporter), member 2 [Source:MGI Symbol;Acc:MGI:1928761]
ENSMUSG00000040918ENSMUST00000159230Slc19a211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 19 (thiamine transporter), member 2 [Source:MGI Symbol;Acc:MGI:1928761]
ENSMUSG00000041040ENSMUST00000036540Fam117b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
family with sequence similarity 117, member B [Source:MGI Symbol;Acc:MGI:1920000]
ENSMUSG00000041570ENSMUST00000094523Camsap221ReverseView as cDNA map |
View as Table
Internal |
Ensembl
calmodulin regulated spectrin-associated protein family, member 2 [Source:MGI Symbol;Acc:MGI:1922434]
ENSMUSG00000041605ENSMUST000000486685730559C18Rik11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA 5730559C18 gene [Source:MGI Symbol;Acc:MGI:1921579]
ENSMUSG00000041605ENSMUST000001203395730559C18Rik11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA 5730559C18 gene [Source:MGI Symbol;Acc:MGI:1921579]
ENSMUSG00000042197ENSMUST00000044455Zfp45111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
zinc finger protein 451 [Source:MGI Symbol;Acc:MGI:2137896]
ENSMUSG00000042510ENSMUST00000039323AA98686011ForwardView as cDNA map |
View as Table
Internal |
Ensembl
expressed sequence AA986860 [Source:MGI Symbol;Acc:MGI:2138143]
ENSMUSG00000042581ENSMUST00000073527Thsd7b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
thrombospondin, type I, domain containing 7B [Source:MGI Symbol;Acc:MGI:2443925]
Please email us for questions and/or suggestions
GUI created by the Computational Medicine Center at the Sidney Kimmel Medical College of Thomas Jefferson University
We gratefully acknowledge support of this work by the William M. Keck Foundation