Back to main page

Genome: Mus Musculus | mRNA | miRBase 18 (Nov. 2011), ENSEMBL 65 (Dec. 2011) and RNA22v2.0
Description: List of transcripts that are targeted by all of the below miRNA identifiers simultaneously
miRNA's: mmu-miR-122-3p (MIMAT0017005)
Filtering By: Base pair min value: 12 | Folding energy max value (Kcal/mol): -12 | Min miRNA targets: 1 | Max p-value: .1


Please hold, your search is in progress...
TIP! If you show ALL results, you'll be able to dynamically sort by one or multiple columns (hold shift)
TIP! You can save this HTML file locally by going to File->Save As if you want to access it quickly later on


Gene IDTranscript IDCommon Gene Name# of miRNA targets
for specified miRNAs
ChromosomeStrand DirectionTranscript Link to view miRNA target predictionsGene LinkDescription
ENSMUSG00000026031ENSMUST00000114313Cflar11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
CASP8 and FADD-like apoptosis regulator [Source:MGI Symbol;Acc:MGI:1336166]
ENSMUSG00000026039ENSMUST00000027202Sgol211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
shugoshin-like 2 (S. pombe) [Source:MGI Symbol;Acc:MGI:1098767]
ENSMUSG00000026070ENSMUST00000108044Il18r111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
interleukin 18 receptor 1 [Source:MGI Symbol;Acc:MGI:105383]
ENSMUSG00000026121ENSMUST00000027295Sema4c11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C [Source:MGI Symbol;Acc:MGI:109252]
ENSMUSG00000026121ENSMUST00000114990Sema4c11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C [Source:MGI Symbol;Acc:MGI:109252]
ENSMUSG00000026121ENSMUST00000114991Sema4c11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C [Source:MGI Symbol;Acc:MGI:109252]
ENSMUSG00000026121ENSMUST00000114992Sema4c11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C [Source:MGI Symbol;Acc:MGI:109252]
ENSMUSG00000026395ENSMUST00000027645Ptprc11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
protein tyrosine phosphatase, receptor type, C [Source:MGI Symbol;Acc:MGI:97810]
ENSMUSG00000026395ENSMUST00000081416Ptprc11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
protein tyrosine phosphatase, receptor type, C [Source:MGI Symbol;Acc:MGI:97810]
ENSMUSG00000026395ENSMUST00000112036Ptprc11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
protein tyrosine phosphatase, receptor type, C [Source:MGI Symbol;Acc:MGI:97810]
ENSMUSG00000026395ENSMUST00000112038Ptprc11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
protein tyrosine phosphatase, receptor type, C [Source:MGI Symbol;Acc:MGI:97810]
ENSMUSG00000026434ENSMUST00000062264Nucks111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
nuclear casein kinase and cyclin-dependent kinase substrate 1 [Source:MGI Symbol;Acc:MGI:1934811]
ENSMUSG00000026532ENSMUST00000027817Spna111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
spectrin alpha 1 [Source:MGI Symbol;Acc:MGI:98385]
ENSMUSG00000026622ENSMUST00000027931Nek211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
NIMA (never in mitosis gene a)-related expressed kinase 2 [Source:MGI Symbol;Acc:MGI:109359]
ENSMUSG00000026667ENSMUST00000027979Uhmk111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
U2AF homology motif (UHM) kinase 1 [Source:MGI Symbol;Acc:MGI:1341908]
ENSMUSG00000026667ENSMUST00000150821Uhmk111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
U2AF homology motif (UHM) kinase 1 [Source:MGI Symbol;Acc:MGI:1341908]
ENSMUSG00000033722ENSMUST00000035914BC03409011ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cDNA sequence BC034090 [Source:MGI Symbol;Acc:MGI:2672904]
ENSMUSG00000034005ENSMUST00000094663Gal3st211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
galactose-3-O-sulfotransferase 2 [Source:MGI Symbol;Acc:MGI:2685834]
ENSMUSG00000037035ENSMUST00000038765Inhbb11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
inhibin beta-B [Source:MGI Symbol;Acc:MGI:96571]
ENSMUSG00000038733ENSMUST00000111053Wdr2621ReverseView as cDNA map |
View as Table
Internal |
Ensembl
WD repeat domain 26 [Source:MGI Symbol;Acc:MGI:1923825]
ENSMUSG00000038733ENSMUST00000162819Wdr2621ReverseView as cDNA map |
View as Table
Internal |
Ensembl
WD repeat domain 26 [Source:MGI Symbol;Acc:MGI:1923825]
ENSMUSG00000041570ENSMUST00000094523Camsap211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
calmodulin regulated spectrin-associated protein family, member 2 [Source:MGI Symbol;Acc:MGI:1922434]
ENSMUSG00000042066ENSMUST00000045473Tmcc211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
transmembrane and coiled-coil domains 2 [Source:MGI Symbol;Acc:MGI:1916125]
ENSMUSG00000042066ENSMUST00000132435Tmcc211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
transmembrane and coiled-coil domains 2 [Source:MGI Symbol;Acc:MGI:1916125]
ENSMUSG00000042066ENSMUST00000142609Tmcc211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
transmembrane and coiled-coil domains 2 [Source:MGI Symbol;Acc:MGI:1916125]
ENSMUSG00000042197ENSMUST00000044455Zfp45111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
zinc finger protein 451 [Source:MGI Symbol;Acc:MGI:2137896]
ENSMUSG00000042671ENSMUST00000041776Rgs811ForwardView as cDNA map |
View as Table
Internal |
Ensembl
regulator of G-protein signaling 8 [Source:MGI Symbol;Acc:MGI:108408]
ENSMUSG00000042671ENSMUST00000111810Rgs811ForwardView as cDNA map |
View as Table
Internal |
Ensembl
regulator of G-protein signaling 8 [Source:MGI Symbol;Acc:MGI:108408]
ENSMUSG00000042671ENSMUST00000111812Rgs811ForwardView as cDNA map |
View as Table
Internal |
Ensembl
regulator of G-protein signaling 8 [Source:MGI Symbol;Acc:MGI:108408]
ENSMUSG00000044835ENSMUST00000111608Ankrd4511ForwardView as cDNA map |
View as Table
Internal |
Ensembl
ankyrin repeat domain 45 [Source:MGI Symbol;Acc:MGI:1921094]
ENSMUSG00000045968ENSMUST000000596075830403L16Rik11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA 5830403L16 gene [Source:MGI Symbol;Acc:MGI:1923273]
ENSMUSG00000045968ENSMUST000001234905830403L16Rik11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA 5830403L16 gene [Source:MGI Symbol;Acc:MGI:1923273]
ENSMUSG00000046062ENSMUST00000052529Ppp1r15b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
protein phosphatase 1, regulatory (inhibitor) subunit 15b [Source:MGI Symbol;Acc:MGI:2444211]
ENSMUSG00000048096ENSMUST00000059352Lmod111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
leiomodin 1 (smooth muscle) [Source:MGI Symbol;Acc:MGI:2135671]
ENSMUSG00000052428ENSMUST00000097473Tmco111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
transmembrane and coiled-coil domains 1 [Source:MGI Symbol;Acc:MGI:1921173]
ENSMUSG00000055567ENSMUST00000061620Unc8011ForwardView as cDNA map |
View as Table
Internal |
Ensembl
unc-80 homolog (C. elegans) [Source:MGI Symbol;Acc:MGI:2652882]
ENSMUSG00000062169ENSMUST00000134115Cnih411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cornichon homolog 4 (Drosophila) [Source:MGI Symbol;Acc:MGI:1925828]
ENSMUSG00000089960ENSMUST00000073049Ugt1a111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
UDP glucuronosyltransferase 1 family, polypeptide A1 [Source:MGI Symbol;Acc:MGI:98898]
ENSMUSG00000091318ENSMUST00000171322Gm541511ReverseView as cDNA map |
View as Table
Internal |
Ensembl
predicted gene 5415 [Source:MGI Symbol;Acc:MGI:3644687]
ENSMUSG00000004085ENSMUST00000135469B230120H23Rik12ForwardView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA B230120H23 gene [Source:MGI Symbol;Acc:MGI:2443258]
ENSMUSG00000009207ENSMUST00000064503Lnp12ReverseView as cDNA map |
View as Table
Internal |
Ensembl
limb and neural patterns [Source:MGI Symbol;Acc:MGI:1918115]
ENSMUSG00000009207ENSMUST00000111993Lnp12ReverseView as cDNA map |
View as Table
Internal |
Ensembl
limb and neural patterns [Source:MGI Symbol;Acc:MGI:1918115]
ENSMUSG00000012350ENSMUST00000090475Ehf12ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ets homologous factor [Source:MGI Symbol;Acc:MGI:1270840]
ENSMUSG00000012350ENSMUST00000111176Ehf12ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ets homologous factor [Source:MGI Symbol;Acc:MGI:1270840]
ENSMUSG00000017817ENSMUST00000017961Jph212ReverseView as cDNA map |
View as Table
Internal |
Ensembl
junctophilin 2 [Source:MGI Symbol;Acc:MGI:1891496]
ENSMUSG00000017817ENSMUST00000109425Jph212ReverseView as cDNA map |
View as Table
Internal |
Ensembl
junctophilin 2 [Source:MGI Symbol;Acc:MGI:1891496]
ENSMUSG00000018770ENSMUST00000018914Atp5g312ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
ENSMUSG00000018770ENSMUST00000111996Atp5g312ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9) [Source:MGI Symbol;Acc:MGI:2442035]
ENSMUSG00000026664ENSMUST00000027975Phyh12ForwardView as cDNA map |
View as Table
Internal |
Ensembl
phytanoyl-CoA hydroxylase [Source:MGI Symbol;Acc:MGI:891978]
ENSMUSG00000026873ENSMUST00000028232Phf1912ReverseView as cDNA map |
View as Table
Internal |
Ensembl
PHD finger protein 19 [Source:MGI Symbol;Acc:MGI:1921266]
ENSMUSG00000026960ENSMUST00000028336Arl6ip612ForwardView as cDNA map |
View as Table
Internal |
Ensembl
ADP-ribosylation factor-like 6 interacting protein 6 [Source:MGI Symbol;Acc:MGI:1929507]
ENSMUSG00000027284ENSMUST00000110701Cdan112ReverseView as cDNA map |
View as Table
Internal |
Ensembl
congenital dyserythropoietic anemia, type I (human) [Source:MGI Symbol;Acc:MGI:1916218]
ENSMUSG00000027338ENSMUST00000110169Prnd12ForwardView as cDNA map |
View as Table
Internal |
Ensembl
prion protein dublet [Source:MGI Symbol;Acc:MGI:1346999]
ENSMUSG00000027338ENSMUST00000110170Prnd12ForwardView as cDNA map |
View as Table
Internal |
Ensembl
prion protein dublet [Source:MGI Symbol;Acc:MGI:1346999]
ENSMUSG00000027338ENSMUST00000110171Prnd12ForwardView as cDNA map |
View as Table
Internal |
Ensembl
prion protein dublet [Source:MGI Symbol;Acc:MGI:1346999]
ENSMUSG00000027338ENSMUST00000110172Prnd12ForwardView as cDNA map |
View as Table
Internal |
Ensembl
prion protein dublet [Source:MGI Symbol;Acc:MGI:1346999]
ENSMUSG00000027338ENSMUST00000124100Prnd12ForwardView as cDNA map |
View as Table
Internal |
Ensembl
prion protein dublet [Source:MGI Symbol;Acc:MGI:1346999]
ENSMUSG00000027338ENSMUST00000136783Prnd12ForwardView as cDNA map |
View as Table
Internal |
Ensembl
prion protein dublet [Source:MGI Symbol;Acc:MGI:1346999]
ENSMUSG00000027339ENSMUST00000028814Rassf212ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ras association (RalGDS/AF-6) domain family member 2 [Source:MGI Symbol;Acc:MGI:2442060]
ENSMUSG00000027479ENSMUST00000028981Mapre112ForwardView as cDNA map |
View as Table
Internal |
Ensembl
microtubule-associated protein, RP/EB family, member 1 [Source:MGI Symbol;Acc:MGI:891995]
ENSMUSG00000027624ENSMUST00000029155Epb4.1l112ForwardView as cDNA map |
View as Table
Internal |
Ensembl
erythrocyte protein band 4.1-like 1 [Source:MGI Symbol;Acc:MGI:103010]
ENSMUSG00000027624ENSMUST00000103135Epb4.1l112ForwardView as cDNA map |
View as Table
Internal |
Ensembl
erythrocyte protein band 4.1-like 1 [Source:MGI Symbol;Acc:MGI:103010]
ENSMUSG00000027624ENSMUST00000103136Epb4.1l112ForwardView as cDNA map |
View as Table
Internal |
Ensembl
erythrocyte protein band 4.1-like 1 [Source:MGI Symbol;Acc:MGI:103010]
ENSMUSG00000027624ENSMUST00000103137Epb4.1l112ForwardView as cDNA map |
View as Table
Internal |
Ensembl
erythrocyte protein band 4.1-like 1 [Source:MGI Symbol;Acc:MGI:103010]
ENSMUSG00000027624ENSMUST00000109572Epb4.1l112ForwardView as cDNA map |
View as Table
Internal |
Ensembl
erythrocyte protein band 4.1-like 1 [Source:MGI Symbol;Acc:MGI:103010]
ENSMUSG00000027624ENSMUST00000109574Epb4.1l112ForwardView as cDNA map |
View as Table
Internal |
Ensembl
erythrocyte protein band 4.1-like 1 [Source:MGI Symbol;Acc:MGI:103010]
ENSMUSG00000027624ENSMUST00000109577Epb4.1l112ForwardView as cDNA map |
View as Table
Internal |
Ensembl
erythrocyte protein band 4.1-like 1 [Source:MGI Symbol;Acc:MGI:103010]
ENSMUSG00000027678ENSMUST00000088095Ncoa312ForwardView as cDNA map |
View as Table
Internal |
Ensembl
nuclear receptor coactivator 3 [Source:MGI Symbol;Acc:MGI:1276535]
ENSMUSG00000027678ENSMUST00000109252Ncoa312ForwardView as cDNA map |
View as Table
Internal |
Ensembl
nuclear receptor coactivator 3 [Source:MGI Symbol;Acc:MGI:1276535]
ENSMUSG00000033526ENSMUST00000089945Ppip5k112ReverseView as cDNA map |
View as Table
Internal |
Ensembl
diphosphoinositol pentakisphosphate kinase 1 [Source:MGI Symbol;Acc:MGI:2443281]
ENSMUSG00000033526ENSMUST00000110625Ppip5k112ReverseView as cDNA map |
View as Table
Internal |
Ensembl
diphosphoinositol pentakisphosphate kinase 1 [Source:MGI Symbol;Acc:MGI:2443281]
ENSMUSG00000033526ENSMUST00000110626Ppip5k112ReverseView as cDNA map |
View as Table
Internal |
Ensembl
diphosphoinositol pentakisphosphate kinase 1 [Source:MGI Symbol;Acc:MGI:2443281]
ENSMUSG00000033526ENSMUST00000110629Ppip5k112ReverseView as cDNA map |
View as Table
Internal |
Ensembl
diphosphoinositol pentakisphosphate kinase 1 [Source:MGI Symbol;Acc:MGI:2443281]
ENSMUSG00000033526ENSMUST00000134796Ppip5k112ReverseView as cDNA map |
View as Table
Internal |
Ensembl
diphosphoinositol pentakisphosphate kinase 1 [Source:MGI Symbol;Acc:MGI:2443281]
ENSMUSG00000033705ENSMUST00000150912Stard912ForwardView as cDNA map |
View as Table
Internal |
Ensembl
START domain containing 9 [Source:MGI Symbol;Acc:MGI:3045258]
ENSMUSG00000037034ENSMUST00000047382Pax112ForwardView as cDNA map |
View as Table
Internal |
Ensembl
paired box gene 1 [Source:MGI Symbol;Acc:MGI:97485]
ENSMUSG00000037034ENSMUST00000109968Pax112ForwardView as cDNA map |
View as Table
Internal |
Ensembl
paired box gene 1 [Source:MGI Symbol;Acc:MGI:97485]
ENSMUSG00000037259ENSMUST000000819826330439K17Rik12ReverseView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA 6330439K17 gene [Source:MGI Symbol;Acc:MGI:2139080]
ENSMUSG00000037259ENSMUST000000983906330439K17Rik12ReverseView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA 6330439K17 gene [Source:MGI Symbol;Acc:MGI:2139080]
ENSMUSG00000038400ENSMUST00000036248Pmepa112ReverseView as cDNA map |
View as Table
Internal |
Ensembl
prostate transmembrane protein, androgen induced 1 [Source:MGI Symbol;Acc:MGI:1929600]
ENSMUSG00000039086ENSMUST00000041126Ss18l112ForwardView as cDNA map |
View as Table
Internal |
Ensembl
synovial sarcoma translocation gene on chromosome 18-like 1 [Source:MGI Symbol;Acc:MGI:2444061]
ENSMUSG00000039164ENSMUST00000048431Naif112ForwardView as cDNA map |
View as Table
Internal |
Ensembl
nuclear apoptosis inducing factor 1 [Source:MGI Symbol;Acc:MGI:1918504]
ENSMUSG00000039449ENSMUST00000035721Prpf1812ReverseView as cDNA map |
View as Table
Internal |
Ensembl
PRP18 pre-mRNA processing factor 18 homolog (yeast) [Source:MGI Symbol;Acc:MGI:1914479]
ENSMUSG00000039671ENSMUST00000109269Zmynd812ReverseView as cDNA map |
View as Table
Internal |
Ensembl
zinc finger, MYND-type containing 8 [Source:MGI Symbol;Acc:MGI:1918025]
ENSMUSG00000040687ENSMUST00000066420Madd12ReverseView as cDNA map |
View as Table
Internal |
Ensembl
MAP-kinase activating death domain [Source:MGI Symbol;Acc:MGI:2444672]
ENSMUSG00000040687ENSMUST00000075269Madd12ReverseView as cDNA map |
View as Table
Internal |
Ensembl
MAP-kinase activating death domain [Source:MGI Symbol;Acc:MGI:2444672]
ENSMUSG00000040687ENSMUST00000077941Madd12ReverseView as cDNA map |
View as Table
Internal |
Ensembl
MAP-kinase activating death domain [Source:MGI Symbol;Acc:MGI:2444672]
ENSMUSG00000040687ENSMUST00000099723Madd12ReverseView as cDNA map |
View as Table
Internal |
Ensembl
MAP-kinase activating death domain [Source:MGI Symbol;Acc:MGI:2444672]
ENSMUSG00000040687ENSMUST00000111367Madd12ReverseView as cDNA map |
View as Table
Internal |
Ensembl
MAP-kinase activating death domain [Source:MGI Symbol;Acc:MGI:2444672]
ENSMUSG00000040687ENSMUST00000111369Madd12ReverseView as cDNA map |
View as Table
Internal |
Ensembl
MAP-kinase activating death domain [Source:MGI Symbol;Acc:MGI:2444672]
ENSMUSG00000040687ENSMUST00000111371Madd12ReverseView as cDNA map |
View as Table
Internal |
Ensembl
MAP-kinase activating death domain [Source:MGI Symbol;Acc:MGI:2444672]
ENSMUSG00000040687ENSMUST00000111372Madd12ReverseView as cDNA map |
View as Table
Internal |
Ensembl
MAP-kinase activating death domain [Source:MGI Symbol;Acc:MGI:2444672]
ENSMUSG00000040687ENSMUST00000111373Madd12ReverseView as cDNA map |
View as Table
Internal |
Ensembl
MAP-kinase activating death domain [Source:MGI Symbol;Acc:MGI:2444672]
ENSMUSG00000040687ENSMUST00000111375Madd12ReverseView as cDNA map |
View as Table
Internal |
Ensembl
MAP-kinase activating death domain [Source:MGI Symbol;Acc:MGI:2444672]
ENSMUSG00000040687ENSMUST00000111376Madd12ReverseView as cDNA map |
View as Table
Internal |
Ensembl
MAP-kinase activating death domain [Source:MGI Symbol;Acc:MGI:2444672]
ENSMUSG00000040687ENSMUST00000111381Madd12ReverseView as cDNA map |
View as Table
Internal |
Ensembl
MAP-kinase activating death domain [Source:MGI Symbol;Acc:MGI:2444672]
ENSMUSG00000041777ENSMUST00000058615Cir112ReverseView as cDNA map |
View as Table
Internal |
Ensembl
corepressor interacting with RBPJ, 1 [Source:MGI Symbol;Acc:MGI:1914185]
ENSMUSG00000041966ENSMUST00000154704Dcaf1712ForwardView as cDNA map |
View as Table
Internal |
Ensembl
DDB1 and CUL4 associated factor 17 [Source:MGI Symbol;Acc:MGI:1923013]
ENSMUSG00000044039ENSMUST00000104889Olfr128812ForwardView as cDNA map |
View as Table
Internal |
Ensembl
olfactory receptor 1288 [Source:MGI Symbol;Acc:MGI:3031122]
ENSMUSG00000044308ENSMUST00000055758Ubr312ForwardView as cDNA map |
View as Table
Internal |
Ensembl
ubiquitin protein ligase E3 component n-recognin 3 [Source:MGI Symbol;Acc:MGI:1861100]
Please email us for questions and/or suggestions
GUI created by the Computational Medicine Center at the Sidney Kimmel Medical College of Thomas Jefferson University
We gratefully acknowledge support of this work by the William M. Keck Foundation