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Genome: Mus Musculus | mRNA | miRBase 18 (Nov. 2011), ENSEMBL 65 (Dec. 2011) and RNA22v2.0
Description: List of transcripts that are targeted by all of the below miRNA identifiers simultaneously
miRNA's: mmu-miR-216b-3p (MIMAT0017233)
Filtering By: Base pair min value: 12 | Folding energy max value (Kcal/mol): -12 | Min miRNA targets: 1 | Max p-value: .1


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Gene IDTranscript IDCommon Gene Name# of miRNA targets
for specified miRNAs
ChromosomeStrand DirectionTranscript Link to view miRNA target predictionsGene LinkDescription
ENSMUSG00000001138ENSMUST00000001166Cnnm311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cyclin M3 [Source:MGI Symbol;Acc:MGI:2151055]
ENSMUSG00000002881ENSMUST00000069792Nab111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ngfi-A binding protein 1 [Source:MGI Symbol;Acc:MGI:107564]
ENSMUSG00000003721ENSMUST00000003818Insig211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
insulin induced gene 2 [Source:MGI Symbol;Acc:MGI:1920249]
ENSMUSG00000004364ENSMUST00000163119Cul311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cullin 3 [Source:MGI Symbol;Acc:MGI:1347360]
ENSMUSG00000004364ENSMUST00000164108Cul311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cullin 3 [Source:MGI Symbol;Acc:MGI:1347360]
ENSMUSG00000004707ENSMUST00000068878Ly911ReverseView as cDNA map |
View as Table
Internal |
Ensembl
lymphocyte antigen 9 [Source:MGI Symbol;Acc:MGI:96885]
ENSMUSG00000004880ENSMUST00000005003Lbr11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
lamin B receptor [Source:MGI Symbol;Acc:MGI:2138281]
ENSMUSG00000005674ENSMUST00000005817Tomm40l11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
translocase of outer mitochondrial membrane 40 homolog-like (yeast) [Source:MGI Symbol;Acc:MGI:3589112]
ENSMUSG00000005674ENSMUST00000111327Tomm40l11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
translocase of outer mitochondrial membrane 40 homolog-like (yeast) [Source:MGI Symbol;Acc:MGI:3589112]
ENSMUSG00000006005ENSMUST00000064506Tpr11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
translocated promoter region [Source:MGI Symbol;Acc:MGI:1922066]
ENSMUSG00000006005ENSMUST00000119161Tpr11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
translocated promoter region [Source:MGI Symbol;Acc:MGI:1922066]
ENSMUSG00000006301ENSMUST00000016309Tmbim131ReverseView as cDNA map |
View as Table
Internal |
Ensembl
transmembrane BAX inhibitor motif containing 1 [Source:MGI Symbol;Acc:MGI:1916910]
ENSMUSG00000006301ENSMUST00000113796Tmbim131ReverseView as cDNA map |
View as Table
Internal |
Ensembl
transmembrane BAX inhibitor motif containing 1 [Source:MGI Symbol;Acc:MGI:1916910]
ENSMUSG00000006411ENSMUST00000006578Pvrl411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
poliovirus receptor-related 4 [Source:MGI Symbol;Acc:MGI:1918990]
ENSMUSG00000006411ENSMUST00000111286Pvrl411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
poliovirus receptor-related 4 [Source:MGI Symbol;Acc:MGI:1918990]
ENSMUSG00000006576ENSMUST00000006751Slc4a311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 4 (anion exchanger), member 3 [Source:MGI Symbol;Acc:MGI:109350]
ENSMUSG00000006576ENSMUST00000027415Slc4a311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 4 (anion exchanger), member 3 [Source:MGI Symbol;Acc:MGI:109350]
ENSMUSG00000006576ENSMUST00000113545Slc4a311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 4 (anion exchanger), member 3 [Source:MGI Symbol;Acc:MGI:109350]
ENSMUSG00000006576ENSMUST00000124341Slc4a311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 4 (anion exchanger), member 3 [Source:MGI Symbol;Acc:MGI:109350]
ENSMUSG00000007097ENSMUST00000085913Atp1a221ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ATPase, Na+/K+ transporting, alpha 2 polypeptide [Source:MGI Symbol;Acc:MGI:88106]
ENSMUSG00000008475ENSMUST00000077755Arpc511ForwardView as cDNA map |
View as Table
Internal |
Ensembl
actin related protein 2/3 complex, subunit 5 [Source:MGI Symbol;Acc:MGI:1915021]
ENSMUSG00000008475ENSMUST00000097536Arpc511ForwardView as cDNA map |
View as Table
Internal |
Ensembl
actin related protein 2/3 complex, subunit 5 [Source:MGI Symbol;Acc:MGI:1915021]
ENSMUSG00000009418ENSMUST00000040599Nav111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
neuron navigator 1 [Source:MGI Symbol;Acc:MGI:2183683]
ENSMUSG00000009633ENSMUST00000009777G0s211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
G0/G1 switch gene 2 [Source:MGI Symbol;Acc:MGI:1316737]
ENSMUSG00000009907ENSMUST00000094646Vps4b11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
vacuolar protein sorting 4b (yeast) [Source:MGI Symbol;Acc:MGI:1100499]
ENSMUSG00000010290ENSMUST00000010434AI59747911ForwardView as cDNA map |
View as Table
Internal |
Ensembl
expressed sequence AI597479 [Source:MGI Symbol;Acc:MGI:2138299]
ENSMUSG00000010311ENSMUST00000010455Optc11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
opticin [Source:MGI Symbol;Acc:MGI:2151113]
ENSMUSG00000010311ENSMUST00000124051Optc11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
opticin [Source:MGI Symbol;Acc:MGI:2151113]
ENSMUSG00000010311ENSMUST00000153617Optc11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
opticin [Source:MGI Symbol;Acc:MGI:2151113]
ENSMUSG00000013973ENSMUST00000064950Dedd11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
death effector domain-containing [Source:MGI Symbol;Acc:MGI:1333874]
ENSMUSG00000013973ENSMUST00000111299Dedd11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
death effector domain-containing [Source:MGI Symbol;Acc:MGI:1333874]
ENSMUSG00000013973ENSMUST00000111300Dedd11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
death effector domain-containing [Source:MGI Symbol;Acc:MGI:1333874]
ENSMUSG00000015843ENSMUST00000015987Rxrg11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
retinoid X receptor gamma [Source:MGI Symbol;Acc:MGI:98216]
ENSMUSG00000015843ENSMUST00000111380Rxrg11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
retinoid X receptor gamma [Source:MGI Symbol;Acc:MGI:98216]
ENSMUSG00000015843ENSMUST00000111384Rxrg11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
retinoid X receptor gamma [Source:MGI Symbol;Acc:MGI:98216]
ENSMUSG00000015843ENSMUST00000111386Rxrg11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
retinoid X receptor gamma [Source:MGI Symbol;Acc:MGI:98216]
ENSMUSG00000016179ENSMUST00000016323Camk1g11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
calcium/calmodulin-dependent protein kinase I gamma [Source:MGI Symbol;Acc:MGI:2388073]
ENSMUSG00000025777ENSMUST00000026879Gdap111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
ganglioside-induced differentiation-associated-protein 1 [Source:MGI Symbol;Acc:MGI:1338002]
ENSMUSG00000025907ENSMUST00000027040Rb1cc111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
RB1-inducible coiled-coil 1 [Source:MGI Symbol;Acc:MGI:1341850]
ENSMUSG00000025909ENSMUST00000115488Sntg111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
syntrophin, gamma 1 [Source:MGI Symbol;Acc:MGI:1918346]
ENSMUSG00000025909ENSMUST00000132064Sntg111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
syntrophin, gamma 1 [Source:MGI Symbol;Acc:MGI:1918346]
ENSMUSG00000025909ENSMUST00000140295Sntg111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
syntrophin, gamma 1 [Source:MGI Symbol;Acc:MGI:1918346]
ENSMUSG00000025932ENSMUST00000027066Eya111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
eyes absent 1 homolog (Drosophila) [Source:MGI Symbol;Acc:MGI:109344]
ENSMUSG00000025932ENSMUST00000080664Eya111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
eyes absent 1 homolog (Drosophila) [Source:MGI Symbol;Acc:MGI:109344]
ENSMUSG00000025932ENSMUST00000168081Eya111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
eyes absent 1 homolog (Drosophila) [Source:MGI Symbol;Acc:MGI:109344]
ENSMUSG00000025938ENSMUST00000171848Slco5a111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier organic anion transporter family, member 5A1 [Source:MGI Symbol;Acc:MGI:2443431]
ENSMUSG00000025939ENSMUST00000117146Ube2w11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ubiquitin-conjugating enzyme E2W (putative) [Source:MGI Symbol;Acc:MGI:1914049]
ENSMUSG00000025956ENSMUST00000053469Mettl21a11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
methyltransferase like 21A [Source:MGI Symbol;Acc:MGI:1914349]
ENSMUSG00000025956ENSMUST00000114079Mettl21a11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
methyltransferase like 21A [Source:MGI Symbol;Acc:MGI:1914349]
ENSMUSG00000025964ENSMUST00000087374Adam2311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
a disintegrin and metallopeptidase domain 23 [Source:MGI Symbol;Acc:MGI:1345162]
ENSMUSG00000025964ENSMUST00000097717Adam2311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
a disintegrin and metallopeptidase domain 23 [Source:MGI Symbol;Acc:MGI:1345162]
ENSMUSG00000025964ENSMUST00000114107Adam2311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
a disintegrin and metallopeptidase domain 23 [Source:MGI Symbol;Acc:MGI:1345162]
ENSMUSG00000025964ENSMUST00000141545Adam2311ForwardView as cDNA map |
View as Table
Internal |
Ensembl
a disintegrin and metallopeptidase domain 23 [Source:MGI Symbol;Acc:MGI:1345162]
ENSMUSG00000025968ENSMUST00000168099Ndufs111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
NADH dehydrogenase (ubiquinone) Fe-S protein 1 [Source:MGI Symbol;Acc:MGI:2443241]
ENSMUSG00000025969ENSMUST00000027112Nrp211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neuropilin 2 [Source:MGI Symbol;Acc:MGI:1100492]
ENSMUSG00000025969ENSMUST00000114155Nrp211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neuropilin 2 [Source:MGI Symbol;Acc:MGI:1100492]
ENSMUSG00000025979ENSMUST00000162364Mob411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
MOB family member 4, phocein [Source:MGI Symbol;Acc:MGI:104899]
ENSMUSG00000025995ENSMUST00000027139Wdr7511ForwardView as cDNA map |
View as Table
Internal |
Ensembl
WD repeat domain 75 [Source:MGI Symbol;Acc:MGI:1920924]
ENSMUSG00000025995ENSMUST00000169703Wdr7511ForwardView as cDNA map |
View as Table
Internal |
Ensembl
WD repeat domain 75 [Source:MGI Symbol;Acc:MGI:1920924]
ENSMUSG00000025997ENSMUST00000027146Ikzf221ReverseView as cDNA map |
View as Table
Internal |
Ensembl
IKAROS family zinc finger 2 [Source:MGI Symbol;Acc:MGI:1342541]
ENSMUSG00000026031ENSMUST00000069333Cflar11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
CASP8 and FADD-like apoptosis regulator [Source:MGI Symbol;Acc:MGI:1336166]
ENSMUSG00000026031ENSMUST00000114313Cflar11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
CASP8 and FADD-like apoptosis regulator [Source:MGI Symbol;Acc:MGI:1336166]
ENSMUSG00000026048ENSMUST00000027214Ercc511ForwardView as cDNA map |
View as Table
Internal |
Ensembl
excision repair cross-complementing rodent repair deficiency, complementation group 5 [Source:MGI Symbol;Acc:MGI:103582]
ENSMUSG00000026048ENSMUST00000166196Ercc511ForwardView as cDNA map |
View as Table
Internal |
Ensembl
excision repair cross-complementing rodent repair deficiency, complementation group 5 [Source:MGI Symbol;Acc:MGI:103582]
ENSMUSG00000026131ENSMUST00000097785Dst11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
dystonin [Source:MGI Symbol;Acc:MGI:104627]
ENSMUSG00000026131ENSMUST00000097786Dst11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
dystonin [Source:MGI Symbol;Acc:MGI:104627]
ENSMUSG00000026159ENSMUST00000113444Agfg111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
ArfGAP with FG repeats 1 [Source:MGI Symbol;Acc:MGI:1333754]
ENSMUSG00000026170ENSMUST00000027356Cyp27a111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cytochrome P450, family 27, subfamily a, polypeptide 1 [Source:MGI Symbol;Acc:MGI:88594]
ENSMUSG00000026224ENSMUST000000274264933407L21Rik11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA 4933407L21 gene [Source:MGI Symbol;Acc:MGI:1918391]
ENSMUSG00000026234ENSMUST00000027438Ncl11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
nucleolin [Source:MGI Symbol;Acc:MGI:97286]
ENSMUSG00000026240ENSMUST00000027446Cops7b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
COP9 (constitutive photomorphogenic) homolog, subunit 7b (Arabidopsis thaliana) [Source:MGI Symbol;Acc:MGI:1349388]
ENSMUSG00000026240ENSMUST00000121534Cops7b11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
COP9 (constitutive photomorphogenic) homolog, subunit 7b (Arabidopsis thaliana) [Source:MGI Symbol;Acc:MGI:1349388]
ENSMUSG00000026272ENSMUST00000027491Agxt11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
alanine-glyoxylate aminotransferase [Source:MGI Symbol;Acc:MGI:1329033]
ENSMUSG00000026278ENSMUST00000027499Bok11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
BCL2-related ovarian killer protein [Source:MGI Symbol;Acc:MGI:1858494]
ENSMUSG00000026308ENSMUST00000027533Klhl3011ForwardView as cDNA map |
View as Table
Internal |
Ensembl
kelch-like 30 (Drosophila) [Source:MGI Symbol;Acc:MGI:1918038]
ENSMUSG00000026344ENSMUST00000159417Lypd111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
Ly6/Plaur domain containing 1 [Source:MGI Symbol;Acc:MGI:1919835]
ENSMUSG00000026355ENSMUST00000027601Mcm611ReverseView as cDNA map |
View as Table
Internal |
Ensembl
minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1298227]
ENSMUSG00000026355ENSMUST00000164171Mcm611ReverseView as cDNA map |
View as Table
Internal |
Ensembl
minichromosome maintenance deficient 6 (MIS5 homolog, S. pombe) (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1298227]
ENSMUSG00000026361ENSMUST00000018337Cdc7321ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:2384876]
ENSMUSG00000026399ENSMUST00000027650Cd5511ReverseView as cDNA map |
View as Table
Internal |
Ensembl
CD55 antigen [Source:MGI Symbol;Acc:MGI:104850]
ENSMUSG00000026399ENSMUST00000140400Cd5511ReverseView as cDNA map |
View as Table
Internal |
Ensembl
CD55 antigen [Source:MGI Symbol;Acc:MGI:104850]
ENSMUSG00000026425ENSMUST00000097588Srgap221ReverseView as cDNA map |
View as Table
Internal |
Ensembl
SLIT-ROBO Rho GTPase activating protein 2 [Source:MGI Symbol;Acc:MGI:109605]
ENSMUSG00000026427ENSMUST00000068791Eif2d11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
eukaryotic translation initiation factor 2D [Source:MGI Symbol;Acc:MGI:109342]
ENSMUSG00000026434ENSMUST00000062264Nucks111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
nuclear casein kinase and cyclin-dependent kinase substrate 1 [Source:MGI Symbol;Acc:MGI:1934811]
ENSMUSG00000026439ENSMUST00000027700Rbbp511ForwardView as cDNA map |
View as Table
Internal |
Ensembl
retinoblastoma binding protein 5 [Source:MGI Symbol;Acc:MGI:1918367]
ENSMUSG00000026452ENSMUST00000121990Syt211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
synaptotagmin II [Source:MGI Symbol;Acc:MGI:99666]
ENSMUSG00000026458ENSMUST00000168515Ppfia411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 [Source:MGI Symbol;Acc:MGI:1915757]
ENSMUSG00000026459ENSMUST00000027730Myog11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
myogenin [Source:MGI Symbol;Acc:MGI:97276]
ENSMUSG00000026463ENSMUST00000048953Atp2b411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ATPase, Ca++ transporting, plasma membrane 4 [Source:MGI Symbol;Acc:MGI:88111]
ENSMUSG00000026463ENSMUST00000125659Atp2b411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ATPase, Ca++ transporting, plasma membrane 4 [Source:MGI Symbol;Acc:MGI:88111]
ENSMUSG00000026463ENSMUST00000143567Atp2b411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ATPase, Ca++ transporting, plasma membrane 4 [Source:MGI Symbol;Acc:MGI:88111]
ENSMUSG00000026463ENSMUST00000165602Atp2b411ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ATPase, Ca++ transporting, plasma membrane 4 [Source:MGI Symbol;Acc:MGI:88111]
ENSMUSG00000026464ENSMUST00000027736Zc3h11a11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
zinc finger CCCH type containing 11A [Source:MGI Symbol;Acc:MGI:1917829]
ENSMUSG00000026470ENSMUST00000027743Stx611ForwardView as cDNA map |
View as Table
Internal |
Ensembl
syntaxin 6 [Source:MGI Symbol;Acc:MGI:1926235]
ENSMUSG00000026471ENSMUST00000027744Mr111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
major histocompatibility complex, class I-related [Source:MGI Symbol;Acc:MGI:1195463]
ENSMUSG00000026532ENSMUST00000027817Spna111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
spectrin alpha 1 [Source:MGI Symbol;Acc:MGI:98385]
ENSMUSG00000026560ENSMUST00000027843Fmo911ReverseView as cDNA map |
View as Table
Internal |
Ensembl
flavin containing monooxygenase 9 [Source:MGI Symbol;Acc:MGI:3606068]
ENSMUSG00000026560ENSMUST00000148677Fmo911ReverseView as cDNA map |
View as Table
Internal |
Ensembl
flavin containing monooxygenase 9 [Source:MGI Symbol;Acc:MGI:3606068]
ENSMUSG00000026565ENSMUST00000160260Pou2f111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
POU domain, class 2, transcription factor 1 [Source:MGI Symbol;Acc:MGI:101898]
ENSMUSG00000026572ENSMUST00000027859Tbx1911ReverseView as cDNA map |
View as Table
Internal |
Ensembl
T-box 19 [Source:MGI Symbol;Acc:MGI:1891158]
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We gratefully acknowledge support of this work by the William M. Keck Foundation