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Genome: Mus Musculus | mRNA | miRBase 18 (Nov. 2011), ENSEMBL 65 (Dec. 2011) and RNA22v2.0
Description: List of transcripts that are targeted by all of the below miRNA identifiers simultaneously
miRNA's: mmu-miR-421-5p (MIMAT0017273)
Filtering By: Base pair min value: 12 | Folding energy max value (Kcal/mol): -12 | Min miRNA targets: 1 | Max p-value: .1


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Gene IDTranscript IDCommon Gene Name# of miRNA targets
for specified miRNAs
ChromosomeStrand DirectionTranscript Link to view miRNA target predictionsGene LinkDescription
ENSMUSG00000004364ENSMUST00000163119Cul311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cullin 3 [Source:MGI Symbol;Acc:MGI:1347360]
ENSMUSG00000004364ENSMUST00000164108Cul311ReverseView as cDNA map |
View as Table
Internal |
Ensembl
cullin 3 [Source:MGI Symbol;Acc:MGI:1347360]
ENSMUSG00000004707ENSMUST00000068878Ly911ReverseView as cDNA map |
View as Table
Internal |
Ensembl
lymphocyte antigen 9 [Source:MGI Symbol;Acc:MGI:96885]
ENSMUSG00000014602ENSMUST00000086819Kif1a11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
kinesin family member 1A [Source:MGI Symbol;Acc:MGI:108391]
ENSMUSG00000014602ENSMUST00000112958Kif1a11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
kinesin family member 1A [Source:MGI Symbol;Acc:MGI:108391]
ENSMUSG00000014602ENSMUST00000171556Kif1a11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
kinesin family member 1A [Source:MGI Symbol;Acc:MGI:108391]
ENSMUSG00000014602ENSMUST00000171796Kif1a11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
kinesin family member 1A [Source:MGI Symbol;Acc:MGI:108391]
ENSMUSG00000015843ENSMUST00000015987Rxrg11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
retinoid X receptor gamma [Source:MGI Symbol;Acc:MGI:98216]
ENSMUSG00000015843ENSMUST00000111380Rxrg11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
retinoid X receptor gamma [Source:MGI Symbol;Acc:MGI:98216]
ENSMUSG00000015843ENSMUST00000111384Rxrg11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
retinoid X receptor gamma [Source:MGI Symbol;Acc:MGI:98216]
ENSMUSG00000015843ENSMUST00000111386Rxrg11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
retinoid X receptor gamma [Source:MGI Symbol;Acc:MGI:98216]
ENSMUSG00000018196ENSMUST00000145969Glrx211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
glutaredoxin 2 (thioltransferase) [Source:MGI Symbol;Acc:MGI:1916617]
ENSMUSG00000025969ENSMUST00000027112Nrp211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neuropilin 2 [Source:MGI Symbol;Acc:MGI:1100492]
ENSMUSG00000025969ENSMUST00000063594Nrp211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neuropilin 2 [Source:MGI Symbol;Acc:MGI:1100492]
ENSMUSG00000025969ENSMUST00000075144Nrp211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neuropilin 2 [Source:MGI Symbol;Acc:MGI:1100492]
ENSMUSG00000025969ENSMUST00000102822Nrp211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neuropilin 2 [Source:MGI Symbol;Acc:MGI:1100492]
ENSMUSG00000025969ENSMUST00000114155Nrp211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neuropilin 2 [Source:MGI Symbol;Acc:MGI:1100492]
ENSMUSG00000025969ENSMUST00000114157Nrp211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
neuropilin 2 [Source:MGI Symbol;Acc:MGI:1100492]
ENSMUSG00000026011ENSMUST00000027164Ctla411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
cytotoxic T-lymphocyte-associated protein 4 [Source:MGI Symbol;Acc:MGI:88556]
ENSMUSG00000026069ENSMUST00000053043Il1rl111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
interleukin 1 receptor-like 1 [Source:MGI Symbol;Acc:MGI:98427]
ENSMUSG00000026069ENSMUST00000097772Il1rl111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
interleukin 1 receptor-like 1 [Source:MGI Symbol;Acc:MGI:98427]
ENSMUSG00000026069ENSMUST00000173514Il1rl111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
interleukin 1 receptor-like 1 [Source:MGI Symbol;Acc:MGI:98427]
ENSMUSG00000026069ENSMUST00000174335Il1rl111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
interleukin 1 receptor-like 1 [Source:MGI Symbol;Acc:MGI:98427]
ENSMUSG00000026121ENSMUST00000027295Sema4c11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C [Source:MGI Symbol;Acc:MGI:109252]
ENSMUSG00000026121ENSMUST00000114990Sema4c11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C [Source:MGI Symbol;Acc:MGI:109252]
ENSMUSG00000026121ENSMUST00000114991Sema4c11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C [Source:MGI Symbol;Acc:MGI:109252]
ENSMUSG00000026121ENSMUST00000114992Sema4c11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C [Source:MGI Symbol;Acc:MGI:109252]
ENSMUSG00000026156ENSMUST00000063663B3gat211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) [Source:MGI Symbol;Acc:MGI:2389490]
ENSMUSG00000026179ENSMUST00000027370Pnkd11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
paroxysmal nonkinesiogenic dyskinesia [Source:MGI Symbol;Acc:MGI:1930773]
ENSMUSG00000026187ENSMUST00000027379Xrcc511ForwardView as cDNA map |
View as Table
Internal |
Ensembl
X-ray repair complementing defective repair in Chinese hamster cells 5 [Source:MGI Symbol;Acc:MGI:104517]
ENSMUSG00000026188ENSMUST00000027380Tmem16911ForwardView as cDNA map |
View as Table
Internal |
Ensembl
transmembrane protein 169 [Source:MGI Symbol;Acc:MGI:2442781]
ENSMUSG00000026360ENSMUST00000127206Rgs211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
regulator of G-protein signaling 2 [Source:MGI Symbol;Acc:MGI:1098271]
ENSMUSG00000026409ENSMUST00000050406Pfkfb211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 [Source:MGI Symbol;Acc:MGI:107815]
ENSMUSG00000026526ENSMUST00000027810Fh111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
fumarate hydratase 1 [Source:MGI Symbol;Acc:MGI:95530]
ENSMUSG00000026553ENSMUST00000027833Copa11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
coatomer protein complex subunit alpha [Source:MGI Symbol;Acc:MGI:1334462]
ENSMUSG00000026553ENSMUST00000135192Copa11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
coatomer protein complex subunit alpha [Source:MGI Symbol;Acc:MGI:1334462]
ENSMUSG00000026553ENSMUST00000172129Copa11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
coatomer protein complex subunit alpha [Source:MGI Symbol;Acc:MGI:1334462]
ENSMUSG00000026565ENSMUST00000160260Pou2f111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
POU domain, class 2, transcription factor 1 [Source:MGI Symbol;Acc:MGI:101898]
ENSMUSG00000026572ENSMUST00000027859Tbx1911ReverseView as cDNA map |
View as Table
Internal |
Ensembl
T-box 19 [Source:MGI Symbol;Acc:MGI:1891158]
ENSMUSG00000026615ENSMUST00000046514Eprs11ForwardView as cDNA map |
View as Table
Internal |
Ensembl
glutamyl-prolyl-tRNA synthetase [Source:MGI Symbol;Acc:MGI:97838]
ENSMUSG00000026640ENSMUST00000027952Plxna211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
plexin A2 [Source:MGI Symbol;Acc:MGI:107684]
ENSMUSG00000027520ENSMUST00000029025Zdbf211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
zinc finger, DBF-type containing 2 [Source:MGI Symbol;Acc:MGI:1921134]
ENSMUSG00000027520ENSMUST00000114132Zdbf211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
zinc finger, DBF-type containing 2 [Source:MGI Symbol;Acc:MGI:1921134]
ENSMUSG00000033124ENSMUST00000040689Atg9a11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
autophagy-related 9A (yeast) [Source:MGI Symbol;Acc:MGI:2138446]
ENSMUSG00000036206ENSMUST00000066279Sh3bp411ForwardView as cDNA map |
View as Table
Internal |
Ensembl
SH3-domain binding protein 4 [Source:MGI Symbol;Acc:MGI:2138297]
ENSMUSG00000037434ENSMUST00000044954Slc30a111ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 30 (zinc transporter), member 1 [Source:MGI Symbol;Acc:MGI:1345281]
ENSMUSG00000038733ENSMUST00000111053Wdr2611ReverseView as cDNA map |
View as Table
Internal |
Ensembl
WD repeat domain 26 [Source:MGI Symbol;Acc:MGI:1923825]
ENSMUSG00000038733ENSMUST00000162819Wdr2611ReverseView as cDNA map |
View as Table
Internal |
Ensembl
WD repeat domain 26 [Source:MGI Symbol;Acc:MGI:1923825]
ENSMUSG00000039210ENSMUST00000110943Gpatch211ForwardView as cDNA map |
View as Table
Internal |
Ensembl
G patch domain containing 2 [Source:MGI Symbol;Acc:MGI:1915019]
ENSMUSG00000040297ENSMUST00000048377AI84810021ReverseView as cDNA map |
View as Table
Internal |
Ensembl
expressed sequence AI848100 [Source:MGI Symbol;Acc:MGI:2138346]
ENSMUSG00000040612ENSMUST00000111416Ildr221ForwardView as cDNA map |
View as Table
Internal |
Ensembl
immunoglobulin-like domain containing receptor 2 [Source:MGI Symbol;Acc:MGI:1196370]
ENSMUSG00000042197ENSMUST00000044455Zfp45111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
zinc finger protein 451 [Source:MGI Symbol;Acc:MGI:2137896]
ENSMUSG00000042429ENSMUST00000038191Adora121ReverseView as cDNA map |
View as Table
Internal |
Ensembl
adenosine A1 receptor [Source:MGI Symbol;Acc:MGI:99401]
ENSMUSG00000042429ENSMUST00000086465Adora111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
adenosine A1 receptor [Source:MGI Symbol;Acc:MGI:99401]
ENSMUSG00000042429ENSMUST00000169927Adora111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
adenosine A1 receptor [Source:MGI Symbol;Acc:MGI:99401]
ENSMUSG00000045968ENSMUST000000596075830403L16Rik11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA 5830403L16 gene [Source:MGI Symbol;Acc:MGI:1923273]
ENSMUSG00000045968ENSMUST000001234905830403L16Rik11ReverseView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA 5830403L16 gene [Source:MGI Symbol;Acc:MGI:1923273]
ENSMUSG00000047496ENSMUST00000058688Rnf15211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ring finger protein 152 [Source:MGI Symbol;Acc:MGI:2443787]
ENSMUSG00000047496ENSMUST00000172299Rnf15211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
ring finger protein 152 [Source:MGI Symbol;Acc:MGI:2443787]
ENSMUSG00000049690ENSMUST00000112583Nckap511ReverseView as cDNA map |
View as Table
Internal |
Ensembl
NCK-associated protein 5 [Source:MGI Symbol;Acc:MGI:2686394]
ENSMUSG00000049690ENSMUST00000161954Nckap511ReverseView as cDNA map |
View as Table
Internal |
Ensembl
NCK-associated protein 5 [Source:MGI Symbol;Acc:MGI:2686394]
ENSMUSG00000049690ENSMUST00000163051Nckap511ReverseView as cDNA map |
View as Table
Internal |
Ensembl
NCK-associated protein 5 [Source:MGI Symbol;Acc:MGI:2686394]
ENSMUSG00000052534ENSMUST00000097471Pbx111ReverseView as cDNA map |
View as Table
Internal |
Ensembl
pre B-cell leukemia transcription factor 1 [Source:MGI Symbol;Acc:MGI:97495]
ENSMUSG00000055567ENSMUST00000061620Unc8011ForwardView as cDNA map |
View as Table
Internal |
Ensembl
unc-80 homolog (C. elegans) [Source:MGI Symbol;Acc:MGI:2652882]
ENSMUSG00000055866ENSMUST00000069620Per211ReverseView as cDNA map |
View as Table
Internal |
Ensembl
period homolog 2 (Drosophila) [Source:MGI Symbol;Acc:MGI:1195265]
ENSMUSG00000066755ENSMUST00000086084Tnfsf1811ForwardView as cDNA map |
View as Table
Internal |
Ensembl
tumor necrosis factor (ligand) superfamily, member 18 [Source:MGI Symbol;Acc:MGI:2673064]
ENSMUSG00000002458ENSMUST00000002532Rgs1912ReverseView as cDNA map |
View as Table
Internal |
Ensembl
regulator of G-protein signaling 19 [Source:MGI Symbol;Acc:MGI:1915153]
ENSMUSG00000002458ENSMUST00000108769Rgs1912ReverseView as cDNA map |
View as Table
Internal |
Ensembl
regulator of G-protein signaling 19 [Source:MGI Symbol;Acc:MGI:1915153]
ENSMUSG00000002458ENSMUST00000108771Rgs1912ReverseView as cDNA map |
View as Table
Internal |
Ensembl
regulator of G-protein signaling 19 [Source:MGI Symbol;Acc:MGI:1915153]
ENSMUSG00000002458ENSMUST00000108772Rgs1912ReverseView as cDNA map |
View as Table
Internal |
Ensembl
regulator of G-protein signaling 19 [Source:MGI Symbol;Acc:MGI:1915153]
ENSMUSG00000002458ENSMUST00000108776Rgs1912ReverseView as cDNA map |
View as Table
Internal |
Ensembl
regulator of G-protein signaling 19 [Source:MGI Symbol;Acc:MGI:1915153]
ENSMUSG00000002458ENSMUST00000108778Rgs1912ReverseView as cDNA map |
View as Table
Internal |
Ensembl
regulator of G-protein signaling 19 [Source:MGI Symbol;Acc:MGI:1915153]
ENSMUSG00000002458ENSMUST00000165416Rgs1912ReverseView as cDNA map |
View as Table
Internal |
Ensembl
regulator of G-protein signaling 19 [Source:MGI Symbol;Acc:MGI:1915153]
ENSMUSG00000002718ENSMUST00000002790Cse1l12ForwardView as cDNA map |
View as Table
Internal |
Ensembl
chromosome segregation 1-like (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1339951]
ENSMUSG00000002718ENSMUST00000163437Cse1l12ForwardView as cDNA map |
View as Table
Internal |
Ensembl
chromosome segregation 1-like (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1339951]
ENSMUSG00000002718ENSMUST00000168599Cse1l12ForwardView as cDNA map |
View as Table
Internal |
Ensembl
chromosome segregation 1-like (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1339951]
ENSMUSG00000002733ENSMUST00000111920Plekha312ForwardView as cDNA map |
View as Table
Internal |
Ensembl
pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 3 [Source:MGI Symbol;Acc:MGI:1932515]
ENSMUSG00000004085ENSMUST00000135469B230120H23Rik12ForwardView as cDNA map |
View as Table
Internal |
Ensembl
RIKEN cDNA B230120H23 gene [Source:MGI Symbol;Acc:MGI:2443258]
ENSMUSG00000005506ENSMUST00000005643Celf112ForwardView as cDNA map |
View as Table
Internal |
Ensembl
CUGBP, Elav-like family member 1 [Source:MGI Symbol;Acc:MGI:1342295]
ENSMUSG00000005506ENSMUST00000068747Celf112ForwardView as cDNA map |
View as Table
Internal |
Ensembl
CUGBP, Elav-like family member 1 [Source:MGI Symbol;Acc:MGI:1342295]
ENSMUSG00000005506ENSMUST00000111449Celf112ForwardView as cDNA map |
View as Table
Internal |
Ensembl
CUGBP, Elav-like family member 1 [Source:MGI Symbol;Acc:MGI:1342295]
ENSMUSG00000005506ENSMUST00000111451Celf112ForwardView as cDNA map |
View as Table
Internal |
Ensembl
CUGBP, Elav-like family member 1 [Source:MGI Symbol;Acc:MGI:1342295]
ENSMUSG00000005506ENSMUST00000111452Celf112ForwardView as cDNA map |
View as Table
Internal |
Ensembl
CUGBP, Elav-like family member 1 [Source:MGI Symbol;Acc:MGI:1342295]
ENSMUSG00000005506ENSMUST00000111455Celf112ForwardView as cDNA map |
View as Table
Internal |
Ensembl
CUGBP, Elav-like family member 1 [Source:MGI Symbol;Acc:MGI:1342295]
ENSMUSG00000008226ENSMUST00000090811Scrn312ForwardView as cDNA map |
View as Table
Internal |
Ensembl
secernin 3 [Source:MGI Symbol;Acc:MGI:1921866]
ENSMUSG00000008226ENSMUST00000112050Scrn312ForwardView as cDNA map |
View as Table
Internal |
Ensembl
secernin 3 [Source:MGI Symbol;Acc:MGI:1921866]
ENSMUSG00000014867ENSMUST00000015011Surf412ReverseView as cDNA map |
View as Table
Internal |
Ensembl
surfeit gene 4 [Source:MGI Symbol;Acc:MGI:98445]
ENSMUSG00000015647ENSMUST00000015791Lama512ReverseView as cDNA map |
View as Table
Internal |
Ensembl
laminin, alpha 5 [Source:MGI Symbol;Acc:MGI:105382]
ENSMUSG00000015647ENSMUST00000087542Lama512ReverseView as cDNA map |
View as Table
Internal |
Ensembl
laminin, alpha 5 [Source:MGI Symbol;Acc:MGI:105382]
ENSMUSG00000017740ENSMUST00000099092Slc12a512ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 12, member 5 [Source:MGI Symbol;Acc:MGI:1862037]
ENSMUSG00000017740ENSMUST00000171274Slc12a512ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 12, member 5 [Source:MGI Symbol;Acc:MGI:1862037]
ENSMUSG00000023393ENSMUST00000094218Slc17a912ForwardView as cDNA map |
View as Table
Internal |
Ensembl
solute carrier family 17, member 9 [Source:MGI Symbol;Acc:MGI:1919107]
ENSMUSG00000026751ENSMUST00000028084Nr5a112ReverseView as cDNA map |
View as Table
Internal |
Ensembl
nuclear receptor subfamily 5, group A, member 1 [Source:MGI Symbol;Acc:MGI:1346833]
ENSMUSG00000026751ENSMUST00000112883Nr5a112ReverseView as cDNA map |
View as Table
Internal |
Ensembl
nuclear receptor subfamily 5, group A, member 1 [Source:MGI Symbol;Acc:MGI:1346833]
ENSMUSG00000026950ENSMUST00000028320Neb12ReverseView as cDNA map |
View as Table
Internal |
Ensembl
nebulin [Source:MGI Symbol;Acc:MGI:97292]
ENSMUSG00000026950ENSMUST00000036934Neb12ReverseView as cDNA map |
View as Table
Internal |
Ensembl
nebulin [Source:MGI Symbol;Acc:MGI:97292]
ENSMUSG00000026950ENSMUST00000075301Neb12ReverseView as cDNA map |
View as Table
Internal |
Ensembl
nebulin [Source:MGI Symbol;Acc:MGI:97292]
ENSMUSG00000026950ENSMUST00000135200Neb12ReverseView as cDNA map |
View as Table
Internal |
Ensembl
nebulin [Source:MGI Symbol;Acc:MGI:97292]
ENSMUSG00000026994ENSMUST00000028378Galnt312ReverseView as cDNA map |
View as Table
Internal |
Ensembl
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 [Source:MGI Symbol;Acc:MGI:894695]
ENSMUSG00000027070ENSMUST00000080953Lrp222ReverseView as cDNA map |
View as Table
Internal |
Ensembl
low density lipoprotein receptor-related protein 2 [Source:MGI Symbol;Acc:MGI:95794]
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We gratefully acknowledge support of this work by the William M. Keck Foundation