CLIPSim-MC tool for identifying miRNA targets from CLIP-seq data

Related links: RNA22 version 2.0 access (custom sequences | precomputed sequences)
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Please cite:
"Argonaute CLIP-Seq reveals miRNA targetome diversity across tissue types", Peter M. Clark, Phillipe Loher, Kevin Quann, Jonathan Brody, Eric R. Londin and Isidore Rigoutsos (Scientific Reports 4, Article number: 5947)

Select Genome/Assembly:
   Select Chromosome:
   Select MicroRNA:
   Note: only chromosomes/miRNAs in which we have predictions for in the genome/assembly are listed

We gratefully acknowledge support of this work by the William M. Keck Foundation, the Hirshberg Foundation for Pancreatic Cancer Research, and the Pennsylvania Department of Health.
Please email us for questions and/or suggestions     -    GUI created by the Computational Medicine Center at the Sidney Kimmel Medical College of Thomas Jefferson University