Teiresias

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If you use any of the below please cite: Rigoutsos, I, Floratos, A (1998) Combinatorial pattern discovery in biological sequences: The TEIRESIAS algorithm Bioinformatics 14: 55-67

Retrieve all patterns that are common in biological sequences. Select the parameters you want below. The parameters with the * are required, you can read more here.

Minimum number of literals (-l):*
Minimum literal density (-w):*
Minimum pattern support (-k):*
Maximum pattern support (-q):
Count each pattern once per sequence (-v):
On Off
Show offset lists (-p): On Off
Only elementary patterns (-s): On Off
Maximum bracket number (-n):
Equivalence List (-b):

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GUI created by the Computational Medicine Center at the Sidney Kimmel Medical College of Thomas Jefferson University