Rogan Magee

Rogan completed his MD and PhD in neuroscience at TJU in 2021. During the PhD, he studied short RNA using a combined computational and experimental approach. He will next train as a neurology resident at the University of Pennsylvania.

2020

• Magee, R, Rigoutsos, I. On the expanding roles of tRNA fragments in modulating cell behavior. Nucleic Acids Res. 2020 Sep 25;48(17):9433-9448. doi: 10.1093/nar/gkaa657. PubMed PMID:32890397.

2019

• Londin, E, Magee, R, Shields, CL, Lally, SE, Sato, T, Rigoutsos, I. IsomiRs and tRNA-derived Fragments are Associated with Metastasis and Patient Survival in Uveal Melanoma. Pigment Cell Melanoma Res. 2019; :. doi: 10.1111/pcmr.12810. PubMed PMID:31283110.
• Magee, R, Londin, E, Rigoutsos, I. tRNA-derived fragments as sex-dependent circulating candidate biomarkers for Parkinson's disease. Parkinsonism Relat Disor Aug 2019 May 25;65:203-209. doi: 10.1016/j.parkreldis.2019.05.035. PubMed PMID:31402278.
• Telonis, AG, Loher, P, Magee, R, Pliatsika, V, Londin, E, Kirino, Y, Rigoutsos, I. tRNA Fragments Show Intertwining with mRNAs of Specific Repeat Content and Have Links to Disparities. Cancer Res. 2019 Apr 17. doi: 10.1158/0008-5472.CAN-19-0789. PubMed PMID:30996049.
• Srinivasan, S, Yeri, A, Cheah, PS, Chung, A, Danielson, K, De, Hoff, P, Filant, J, Laurent, CD, Laurent, LD, Magee, R, Moeller, C, Murthy, VL, Nejad, P, PaulAPC9016:~ vxp025$ Rodosthenous, R, Shah, RV, Simonson, B, To, C, Wong, D, Yan, IK, Zhang, X, Balaj, L, Breakefield, XO, Daaboul, G, Gandhi, R, Lapidus, J, Londin, E, Patel, T, Raffai, RL, Sood, AK, Alexander, RP, Das, S, Laurent, LC. Small RNA Sequencing across Diverse Biofluids Identifies Optimal Methods for exRNA Isolation. Cell. 2019 Apr 4;177(2):446-462.e16. doi: 10.1016/j.cell.2019.03.024. PubMed PMID:30951671

2018

• Magee, RG, Telonis, AG, Loher, P, Londin, E, Rigoutsos, I. Profiles of miRNA Isoforms and tRNA Fragments in Prostate Cancer. Sci Rep. 2018;8 (1):5314. doi: 10.1038/s41598-018-22488-2. PubMed PMID:29593348 PubMed Central PMC5871839.
• Pliatsika, V, Loher, P, Magee, R, Telonis, AG, Londin, E, Shigematsu, M, Kirino, Y, Rigoutsos, I. MINTbase v2.0: a comprehensive database for tRNA-derived fragments that includes nuclear and mitochondrial fragments from all The Cancer Genome Atlas projects. Nucleic Acids Res. 2018;46 (D1):D152-D159. doi: 10.1093/nar/gkx1075. PubMed PMID:29186503 PubMed Central PMC5753276.

2017

• Magee, R, Telonis, AG, Cherlin, T, Rigoutsos, I, Londin, E. Assessment of isomiR Discrimination Using Commercial qPCR Methods. Noncoding RNA. 2017;3 (2):. doi: 10.3390/ncrna3020018. PubMed PMID:28730153 PubMed Central PMC5514785.
• Telonis, AG, Magee, R, Loher, P, Chervoneva, I, Londin, E, Rigoutsos, I. Knowledge about the presence or absence of miRNA isoforms (isomiRs) can successfully discriminate amongst 32 TCGA cancer types. Nucleic Acids Res. 2017;45 (6):2973-2985. doi: 10.1093/nar/gkx082. PubMed PMID:28206648 PubMed Central PMC5389567.
• Magee, R, Loher, P, Londin, E, Rigoutsos, I. Threshold-seq: a tool for determining the threshold in short RNA-seq datasets. Bioinformatics. 2017;33 (13):2034-2036. doi: 10.1093/bioinformatics/btx073. PubMed PMID:28203700 PubMed Central PMC5870860.

2009

• Suriyawong, A, Magee, R, Peebles, K, Biswas, P. Energy recycling by co-combustion of coal and recovered paint solids from automobile paint operations. J Air Waste Manag Assoc. 2009;59 (5):560-7. PubMed PMID:19583156.

Email: rgm005@jefferson.edu